RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 VCPP55072 806 aaKnown RBP19.88■□□□□ 0.77
SF3B4-202ENST00000457312 KIAA1755Q5JYT7 1200 aa19.88■□□□□ 0.77
SF3B4-202ENST00000457312 MAMDC4Q6UXC1 1216 aa19.88■□□□□ 0.77
SF3B4-202ENST00000457312 RNF135Q8IUD6 432 aa19.88■□□□□ 0.77
SF3B4-202ENST00000457312 FBXL6Q8N531 539 aa19.88■□□□□ 0.77
SF3B4-202ENST00000457312 TRPC6Q9Y210 931 aa19.88■□□□□ 0.77
SF3B4-202ENST00000457312 ZNF292O60281 2723 aa19.88■□□□□ 0.77
SF3B4-202ENST00000457312 MAP1BP46821 2468 aaKnown RBP19.87■□□□□ 0.77
SF3B4-202ENST00000457312 IL16Q14005 1332 aa19.87■□□□□ 0.77
SF3B4-202ENST00000457312 FLOT1O75955 427 aa19.87■□□□□ 0.77
SF3B4-202ENST00000457312 CCDC144BQ3MJ40 725 aa19.87■□□□□ 0.77
SF3B4-202ENST00000457312 RIOX2Q8IUF8 465 aa19.87■□□□□ 0.77
SF3B4-202ENST00000457312 FSD1Q9BTV5 496 aa19.87■□□□□ 0.77
SF3B4-202ENST00000457312 CABYRO75952 493 aa19.86■□□□□ 0.77
SF3B4-202ENST00000457312 ERVK-21P61565 698 aa19.86■□□□□ 0.77
SF3B4-202ENST00000457312 ACVR2BQ13705 512 aa19.86■□□□□ 0.77
SF3B4-202ENST00000457312 CERKLQ49MI3 558 aaPredicted RBP19.86■□□□□ 0.77
SF3B4-202ENST00000457312 EP300Q09472 2414 aaPredicted RBP19.86■□□□□ 0.77
SF3B4-202ENST00000457312 ASTN1O14525 1302 aa19.85■□□□□ 0.77
SF3B4-202ENST00000457312 BAG3O95817 575 aa19.85■□□□□ 0.77
SF3B4-202ENST00000457312 PPP4CP60510 307 aa19.85■□□□□ 0.77
SF3B4-202ENST00000457312 TIMM10P62072 90 aa19.85■□□□□ 0.77
SF3B4-202ENST00000457312 COL19A1Q14993 1142 aa19.85■□□□□ 0.77
SF3B4-202ENST00000457312 ADGRA1Q86SQ6 560 aa19.85■□□□□ 0.77
SF3B4-202ENST00000457312 WWC1Q8IX03 1113 aa19.85■□□□□ 0.77
SF3B4-202ENST00000457312 SPATA5Q8NB90 893 aa19.85■□□□□ 0.77
SF3B4-202ENST00000457312 CNTNAP3BQ96NU0 1288 aa19.85■□□□□ 0.77
SF3B4-202ENST00000457312 TGS1Q96RS0 853 aaKnown RBP19.85■□□□□ 0.77
SF3B4-202ENST00000457312 SEZ6LQ9BYH1 1024 aa19.85■□□□□ 0.77
SF3B4-202ENST00000457312 CNTNAP3Q9BZ76 1288 aa19.85■□□□□ 0.77
SF3B4-202ENST00000457312 WDR87Q6ZQQ6 2873 aa19.85■□□□□ 0.77
SF3B4-202ENST00000457312 H0Y858 1186 aa19.84■□□□□ 0.77
SF3B4-202ENST00000457312 CYP2C9P11712 490 aa19.84■□□□□ 0.77
SF3B4-202ENST00000457312 IL15P40933 162 aaPredicted RBP19.84■□□□□ 0.77
SF3B4-202ENST00000457312 EXOSC9Q06265 439 aaKnown RBP19.84■□□□□ 0.77
SF3B4-202ENST00000457312 SEPT2Q15019 361 aa19.84■□□□□ 0.77
SF3B4-202ENST00000457312 TMCO2Q7Z6W1 182 aaPredicted RBP19.84■□□□□ 0.77
SF3B4-202ENST00000457312 PABPC5Q96DU9 382 aaKnown RBP19.84■□□□□ 0.77
SF3B4-202ENST00000457312 XAGE2Q96GT9 111 aa19.84■□□□□ 0.77
SF3B4-202ENST00000457312 POP1Q99575 1024 aaKnown RBP19.84■□□□□ 0.77
SF3B4-202ENST00000457312 EHD4Q9H223 541 aa19.84■□□□□ 0.77
SF3B4-202ENST00000457312 CABP5Q9NP86 173 aa19.84■□□□□ 0.77
SF3B4-202ENST00000457312 TLR9Q9NR96 1032 aa19.84■□□□□ 0.77
SF3B4-202ENST00000457312 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.84■□□□□ 0.77
SF3B4-202ENST00000457312 SERPINB13Q9UIV8 391 aa19.84■□□□□ 0.77
SF3B4-202ENST00000457312 CEP250Q9BV73 2442 aa19.83■□□□□ 0.77
SF3B4-202ENST00000457312 TRIP12Q14669 1992 aaPredicted RBP19.83■□□□□ 0.77
SF3B4-202ENST00000457312 RFC2P35250 354 aa19.83■□□□□ 0.77
SF3B4-202ENST00000457312 MVPQ14764 893 aaKnown RBP19.83■□□□□ 0.77
SF3B4-202ENST00000457312 CCDC27Q2M243 656 aa19.83■□□□□ 0.77
SF3B4-202ENST00000457312 USP44Q9H0E7 712 aa19.83■□□□□ 0.77
SF3B4-202ENST00000457312 ALDH8A1Q9H2A2 487 aaPredicted RBP19.83■□□□□ 0.77
SF3B4-202ENST00000457312 LINC01553A4QN01 128 aa19.82■□□□□ 0.76
SF3B4-202ENST00000457312 BAIAP3O94812 1187 aa19.82■□□□□ 0.76
SF3B4-202ENST00000457312 SHMT1P34896 483 aa19.82■□□□□ 0.76
SF3B4-202ENST00000457312 PSMC6P62333 389 aa19.82■□□□□ 0.76
SF3B4-202ENST00000457312 SMAD2Q15796 467 aaKnown RBP19.82■□□□□ 0.76
SF3B4-202ENST00000457312 TRMT13Q9NUP7 481 aaKnown RBP19.82■□□□□ 0.76
SF3B4-202ENST00000457312 ADAMTS5Q9UNA0 930 aa19.82■□□□□ 0.76
SF3B4-202ENST00000457312 MYH8P13535 1937 aa19.82■□□□□ 0.76
SF3B4-202ENST00000457312 DNAJC25-GNG10A0A024R161 153 aa19.81■□□□□ 0.76
SF3B4-202ENST00000457312 A0A1B0GUL7 405 aa19.81■□□□□ 0.76
SF3B4-202ENST00000457312 NAA16Q6N069 864 aaPredicted RBP19.81■□□□□ 0.76
SF3B4-202ENST00000457312 MRPL38Q96DV4 380 aaKnown RBP19.81■□□□□ 0.76
SF3B4-202ENST00000457312 ABHD16BQ9H3Z7 469 aa19.81■□□□□ 0.76
SF3B4-202ENST00000457312 LRP2BPQ9P2M1 347 aa19.81■□□□□ 0.76
SF3B4-202ENST00000457312 ZNF214Q9UL59 606 aaPredicted RBP19.81■□□□□ 0.76
SF3B4-202ENST00000457312 SPTBN2O15020 2390 aa19.81■□□□□ 0.76
SF3B4-202ENST00000457312 TNKSO95271 1327 aa19.8■□□□□ 0.76
SF3B4-202ENST00000457312 NAV1Q8NEY1 1877 aa19.8■□□□□ 0.76
SF3B4-202ENST00000457312 STAT3P40763 770 aa19.8■□□□□ 0.76
SF3B4-202ENST00000457312 NBL1P41271 181 aa19.8■□□□□ 0.76
SF3B4-202ENST00000457312 KCNJ6P48051 423 aa19.8■□□□□ 0.76
SF3B4-202ENST00000457312 WDR5P61964 334 aaKnown RBP19.8■□□□□ 0.76
SF3B4-202ENST00000457312 TIGD5Q53EQ6 642 aa19.8■□□□□ 0.76
SF3B4-202ENST00000457312 EP400NLQ6ZTU2 488 aa19.8■□□□□ 0.76
SF3B4-202ENST00000457312 ZNF467Q7Z7K2 595 aaPredicted RBP19.8■□□□□ 0.76
SF3B4-202ENST00000457312 FGD4Q96M96 766 aa19.8■□□□□ 0.76
SF3B4-202ENST00000457312 KATNBL1Q9H079 304 aa19.8■□□□□ 0.76
SF3B4-202ENST00000457312 PA2G4Q9UQ80 394 aaKnown RBP19.8■□□□□ 0.76
SF3B4-202ENST00000457312 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.79■□□□□ 0.76
SF3B4-202ENST00000457312 COPB2P35606 906 aa19.79■□□□□ 0.76
SF3B4-202ENST00000457312 ZXDAP98168 799 aa19.79■□□□□ 0.76
SF3B4-202ENST00000457312 FSCN1Q16658 493 aaKnown RBP19.79■□□□□ 0.76
SF3B4-202ENST00000457312 SPICE1Q8N0Z3 855 aa19.79■□□□□ 0.76
SF3B4-202ENST00000457312 FTOQ9C0B1 505 aaKnown RBP eCLIP19.79■□□□□ 0.76
SF3B4-202ENST00000457312 SCN10AQ9Y5Y9 1956 aa19.79■□□□□ 0.76
SF3B4-202ENST00000457312 NLRC5Q86WI3 1866 aa19.78■□□□□ 0.76
SF3B4-202ENST00000457312 ARID4AP29374 1257 aaPredicted RBP19.78■□□□□ 0.76
SF3B4-202ENST00000457312 AVPR2P30518 371 aa19.78■□□□□ 0.76
SF3B4-202ENST00000457312 DEFB103AP81534 67 aa19.78■□□□□ 0.76
SF3B4-202ENST00000457312 TCEAL5Q5H9L2 206 aa19.78■□□□□ 0.76
SF3B4-202ENST00000457312 TLK2Q86UE8 772 aa19.78■□□□□ 0.76
SF3B4-202ENST00000457312 MAGEB6Q8N7X4 407 aa19.78■□□□□ 0.76
SF3B4-202ENST00000457312 FBXO22Q8NEZ5 403 aa19.78■□□□□ 0.76
SF3B4-202ENST00000457312 REPS2Q8NFH8 660 aa19.78■□□□□ 0.76
SF3B4-202ENST00000457312 ZBED2Q9BTP6 218 aa19.78■□□□□ 0.76
SF3B4-202ENST00000457312 PTGS1P23219 599 aa19.77■□□□□ 0.76
SF3B4-202ENST00000457312 LTBRP36941 435 aa19.77■□□□□ 0.76
SF3B4-202ENST00000457312 MCAMP43121 646 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms