RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 FRMPD2Q68DX3 1309 aaPredicted RBP11.76□□□□□ -0.53
ATG4A-206ENST00000457035 KIAA0100Q14667 2235 aaKnown RBP11.76□□□□□ -0.53
ATG4A-206ENST00000457035 PLXNB2O15031 1838 aa11.76□□□□□ -0.53
ATG4A-206ENST00000457035 PALM3A6NDB9 673 aaPredicted RBP11.75□□□□□ -0.53
ATG4A-206ENST00000457035 ATP2A1O14983 1001 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
ATG4A-206ENST00000457035 FMNL1O95466 1100 aaPredicted RBP11.75□□□□□ -0.53
ATG4A-206ENST00000457035 GNRH1P01148 92 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 GOLGA8HP0CJ92 632 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 FDX1P10109 184 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 CASTP20810 708 aaKnown RBP11.75□□□□□ -0.53
ATG4A-206ENST00000457035 RPS6KB1P23443 525 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 SLC16A2P36021 539 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 ANAPC15P60006 121 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 KIF22Q14807 665 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 ARHGEF6Q15052 776 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 CCDC96Q2M329 555 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 GPATCH4Q5T3I0 446 aaKnown RBP11.75□□□□□ -0.53
ATG4A-206ENST00000457035 BLOC1S2Q6QNY1 142 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 SGMS1Q86VZ5 419 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 STAG2Q8N3U4 1231 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 FBXL16Q8N461 479 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 MOV10L1Q9BXT6 1211 aaKnown RBP11.75□□□□□ -0.53
ATG4A-206ENST00000457035 SPATC1LQ9H0A9 340 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 MAD2L2Q9UI95 211 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 GJD2Q9UKL4 321 aa11.75□□□□□ -0.53
ATG4A-206ENST00000457035 HTTP42858 3142 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 ZBED4O75132 1171 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 PARP1P09874 1014 aaKnown RBP11.74□□□□□ -0.53
ATG4A-206ENST00000457035 STAT3P40763 770 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 FCGRTP55899 365 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 CCNA1P78396 465 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 GRM4Q14833 912 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 ASPRV1Q53RT3 343 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 RUFY3Q7L099 469 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 CATIPQ7Z7H3 387 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 ZNF654Q8IZM8 581 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 MAP3K14Q99558 947 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 AGXT2Q9BYV1 514 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 UBA5Q9GZZ9 404 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 CPVLQ9H3G5 476 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 ISY1Q9ULR0 285 aaKnown RBP11.74□□□□□ -0.53
ATG4A-206ENST00000457035 ZNF536O15090 1300 aa11.74□□□□□ -0.53
ATG4A-206ENST00000457035 CCDC69A6NI79 296 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 KLRF2D3W0D1 207 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 ERCC3P19447 782 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 HOXD10P28358 340 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 MAPK4P31152 587 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 OAZ1P54368 228 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 SNAP25P60880 206 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 IKQ13123 557 aaPredicted RBP11.73□□□□□ -0.53
ATG4A-206ENST00000457035 PLS1Q14651 629 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 SLC35G1Q2M3R5 365 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 SYDE2Q5VT97 1194 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 Q6ZUG5 572 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 GPR142Q7Z601 462 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 RIOX2Q8IUF8 465 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 CPXCR1Q8N123 301 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 SHCBP1Q8NEM2 672 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 MYL10Q9BUA6 226 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 RANBP17Q9H2T7 1088 aaKnown RBP11.73□□□□□ -0.53
ATG4A-206ENST00000457035 RAVER2Q9HCJ3 691 aaKnown RBP11.73□□□□□ -0.53
ATG4A-206ENST00000457035 SRRDQ9UH36 339 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 BRPF3Q9ULD4 1205 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 GABRQQ9UN88 632 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 PTPN22Q9Y2R2 807 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 RIPK3Q9Y572 518 aa11.73□□□□□ -0.53
ATG4A-206ENST00000457035 TNPO2O14787 897 aaKnown RBP11.72□□□□□ -0.53
ATG4A-206ENST00000457035 DDAH1O94760 285 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 SLC25A27O95847 323 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 PRMT2P55345 433 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 EVCP57679 992 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 MORN1Q5T089 497 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 PRPF38BQ5VTL8 546 aaKnown RBP11.72□□□□□ -0.53
ATG4A-206ENST00000457035 APOA5Q6Q788 366 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 NFXL1Q6ZNB6 911 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 PLEKHH3Q7Z736 793 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 NBPF11Q86T75 865 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 ADGRF4Q8IZF3 695 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 NUP133Q8WUM0 1156 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 USP6NLQ92738 828 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 COA7Q96BR5 231 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 AGBL1Q96MI9 1066 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 TEX13BQ9BXU2 312 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 SLC12A7Q9Y666 1083 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 CYP46A1Q9Y6A2 500 aa11.72□□□□□ -0.53
ATG4A-206ENST00000457035 CYTH3O43739 400 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 STRNO43815 780 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 CALM1P0DP23 149 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 CALM2P0DP24 149 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 CALM3P0DP25 149 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 RXRAP19793 462 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 PTPREP23469 700 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 SMARCA1P28370 1054 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 FLT3LGP49771 235 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 PRKCZQ05513 592 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 TOB2Q14106 344 aaPredicted RBP11.71□□□□□ -0.53
ATG4A-206ENST00000457035 SNRNP48Q6IEG0 339 aaKnown RBP11.71□□□□□ -0.53
ATG4A-206ENST00000457035 NCAPG2Q86XI2 1143 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 CCAR1Q8IX12 1150 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms