RNA–Protein interactions for RNA: ENST00000456932.6

CSPG4P10-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

BASIC

Gene CSPG4P10, Length 4,817 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-201ENST00000456932 VTI1AQ96AJ9 217 aa12.55□□□□□ -0.4
CSPG4P10-201ENST00000456932 SLC1A4P43007 532 aa12.55□□□□□ -0.4
CSPG4P10-201ENST00000456932 CYP26C1Q6V0L0 522 aa12.55□□□□□ -0.4
CSPG4P10-201ENST00000456932 ARFGAP2Q8N6H7 521 aa12.55□□□□□ -0.4
CSPG4P10-201ENST00000456932 GLT8D2Q9H1C3 349 aa12.55□□□□□ -0.4
CSPG4P10-201ENST00000456932 DCP1AQ9NPI6 582 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P10-201ENST00000456932 SERPINA10Q9UK55 444 aa12.55□□□□□ -0.4
CSPG4P10-201ENST00000456932 FRMPD2Q68DX3 1309 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P10-201ENST00000456932 BBOX1O75936 387 aa12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 OR52Z1P0C646 297 aa12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 KRT9P35527 623 aa12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 TCP10Q12799 353 aa12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 SF3B3Q15393 1217 aaKnown RBP12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 LRRC47Q8N1G4 583 aaKnown RBP12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 MICAL1Q8TDZ2 1067 aa12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 NSRP1Q9H0G5 558 aaKnown RBP12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 KIF5AQ12840 1032 aa12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 NEK8Q86SG6 692 aa12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 TMTC1Q8IUR5 882 aa12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 HPS5Q9UPZ3 1129 aa12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 PSDA5PKW4 1024 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 LIG3P49916 1009 aa12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 MORC3Q14149 939 aa12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 TMED8Q6PL24 325 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 BUB1BO60566 1050 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 PRPF4BQ13523 1007 aaKnown RBP12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 INTS5Q6P9B9 1019 aaKnown RBP12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 CCDC65Q8IXS2 484 aa12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 OXER1Q8TDS5 423 aa12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 GPR101Q96P66 508 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 SPAG5Q96R06 1193 aa12.54□□□□□ -0.4
CSPG4P10-201ENST00000456932 RPN1P04843 607 aaKnown RBP12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 ATP1A3P13637 1013 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 SCNN1DP51172 638 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 PPP2R5AQ15172 486 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 DGKHQ86XP1 1220 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 ARHGEF1Q92888 912 aaKnown RBP12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 PICK1Q9NRD5 415 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 EPSTI1Q96J88 318 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 PPP1R12CQ9BZL4 782 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 USP17L3A6NCW0 530 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 USP17L4A6NCW7 530 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 KCNJ18B7U540 433 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 PPEF1O14829 653 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 PPIP5K2O43314 1243 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 CCDC172P0C7W6 258 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 PCK1P35558 622 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 KCNJ12Q14500 433 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 DOK7Q18PE1 504 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 ARHGAP27Q6ZUM4 889 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 SMIM5Q71RC9 77 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 USP17L1Q7RTZ2 530 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 SENP2Q9HC62 589 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 GOLGA6CA6NDK9 693 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 TACC1O75410 805 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 GOLGA6DP0CG33 693 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 GUCY1A2P33402 732 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 NT5C2P49902 561 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 SHC4Q6S5L8 630 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 DYMQ7RTS9 669 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 ENOX1Q8TC92 643 aaKnown RBP12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 BPIFA3Q9BQP9 254 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 GOLGA6AQ9NYA3 693 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 JRKLQ9Y4A0 524 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 SAMM50Q9Y512 469 aa12.53□□□□□ -0.4
CSPG4P10-201ENST00000456932 RGPD1P0DJD0 1748 aa12.52□□□□□ -0.4
CSPG4P10-201ENST00000456932 TRAF5O00463 557 aa12.52□□□□□ -0.4
CSPG4P10-201ENST00000456932 TECP42680 631 aa12.52□□□□□ -0.4
CSPG4P10-201ENST00000456932 ETF1P62495 437 aaKnown RBP12.52□□□□□ -0.4
CSPG4P10-201ENST00000456932 ARID5BQ14865 1188 aa12.52□□□□□ -0.4
CSPG4P10-201ENST00000456932 CCDC122Q5T0U0 273 aa12.52□□□□□ -0.4
CSPG4P10-201ENST00000456932 SYCP3Q8IZU3 236 aa12.52□□□□□ -0.4
CSPG4P10-201ENST00000456932 LINC00116Q8NCU8 138 aa12.52□□□□□ -0.4
CSPG4P10-201ENST00000456932 SH3RF3Q8TEJ3 882 aaPredicted RBP12.52□□□□□ -0.4
CSPG4P10-201ENST00000456932 SPATA31A5Q5VU36 1347 aa12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 SPATA31A7Q8IWB4 1347 aa12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 NMT2O60551 498 aa12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 NOP2P46087 812 aaKnown RBP12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 CFAP58Q5T655 872 aa12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 PNMA8AQ86V59 439 aaPredicted RBP12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 CCDC51Q96ER9 411 aa12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 PPP2R2CQ9Y2T4 447 aa12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 RRP15Q9Y3B9 282 aaKnown RBP12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 CAPN7Q9Y6W3 813 aa12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 TMC4Q7Z404 712 aa12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 DHX40Q8IX18 779 aaKnown RBP12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 SMYD4Q8IYR2 804 aaPredicted RBP12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 PPP1R13BQ96KQ4 1090 aa12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 EFCC1Q9HA90 598 aa12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 BCL9O00512 1426 aa12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 CHD2O14647 1828 aaKnown RBP12.52□□□□□ -0.41
CSPG4P10-201ENST00000456932 BRD2P25440 801 aaKnown RBP12.51□□□□□ -0.41
CSPG4P10-201ENST00000456932 BARGINQ6ZT62 677 aa12.51□□□□□ -0.41
CSPG4P10-201ENST00000456932 C2CD5Q86YS7 1000 aa12.51□□□□□ -0.41
CSPG4P10-201ENST00000456932 DESI2Q9BSY9 194 aa12.51□□□□□ -0.41
CSPG4P10-201ENST00000456932 CAMTA1Q9Y6Y1 1673 aa12.51□□□□□ -0.41
CSPG4P10-201ENST00000456932 PLS1Q14651 629 aa12.51□□□□□ -0.41
CSPG4P10-201ENST00000456932 PTPN21Q16825 1174 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms