RNA–Protein interactions for RNA: ENST00000456458.5

NT5C3A-208, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 1 (best)

Gene NT5C3A, Length 1,742 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-208ENST00000456458 USP17L3A6NCW0 530 aa16.51■□□□□ 0.23
NT5C3A-208ENST00000456458 USP17L4A6NCW7 530 aa16.51■□□□□ 0.23
NT5C3A-208ENST00000456458 LGALS16A8MUM7 142 aa16.51■□□□□ 0.23
NT5C3A-208ENST00000456458 hCG_1984214I3L0E3 225 aa16.51■□□□□ 0.23
NT5C3A-208ENST00000456458 CHMP4BP1P59074 171 aa16.51■□□□□ 0.23
NT5C3A-208ENST00000456458 ZNF569Q5MCW4 686 aa16.51■□□□□ 0.23
NT5C3A-208ENST00000456458 USP17L1Q7RTZ2 530 aa16.51■□□□□ 0.23
NT5C3A-208ENST00000456458 ZNF713Q8N859 430 aaPredicted RBP16.51■□□□□ 0.23
NT5C3A-208ENST00000456458 GIMAP8Q8ND71 665 aaPredicted RBP16.51■□□□□ 0.23
NT5C3A-208ENST00000456458 TGFBRAP1Q8WUH2 860 aa16.51■□□□□ 0.23
NT5C3A-208ENST00000456458 NUP58Q9BVL2 599 aa16.51■□□□□ 0.23
NT5C3A-208ENST00000456458 GDAQ9Y2T3 454 aa16.51■□□□□ 0.23
NT5C3A-208ENST00000456458 CCDC151A5D8V7 595 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 OR52Z1P0C646 297 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 RASA1P20936 1047 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 ATP2B4P23634 1241 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 RFC4P35249 363 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 KRT9P35527 623 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 DNM2P50570 870 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 KCNQ4P56696 695 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 PIP4K2BP78356 416 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 NONOQ15233 471 aaKnown RBP eCLIP16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 WHAMMP3Q1A5X7 153 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 INF2Q27J81 1249 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 KIF4BQ2VIQ3 1234 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 NAALADL2Q58DX5 795 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 SOGA3Q5TF21 947 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 CC2D1AQ6P1N0 951 aaPredicted RBP16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 C16orf86Q6ZW13 317 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 MB21D1Q8N884 522 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 RETREG2Q8NC44 543 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 OR8K1Q8NGG5 319 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 NEDD1Q8NHV4 660 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 IQCDQ96DY2 449 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 RRP36Q96EU6 259 aaKnown RBP16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 NAPGQ99747 312 aaPredicted RBP16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 STX8Q9UNK0 236 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 KLRF2D3W0D1 207 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 CYTH3O43739 400 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 NAPAP54920 295 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 TRAPPC3LQ5T215 181 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 TAF3Q5VWG9 929 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 TYW1BQ6NUM6 668 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 CABP7Q86V35 215 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 RASGRP4Q8TDF6 673 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 RTFDC1Q9BY42 306 aaPredicted RBP16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 TMEM60Q9H2L4 133 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 SEC63Q9UGP8 760 aaKnown RBP16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 JAG2Q9Y219 1238 aa16.5■□□□□ 0.23
NT5C3A-208ENST00000456458 NHSQ6T4R5 1651 aa16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 GPR75-ASB3A0A0A6YYF3 556 aa16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 ESYT2A0FGR8 921 aa16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 ADAMTS3O15072 1205 aa16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 KLRC4O43908 158 aa16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 ERVK-24P63145 666 aa16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 COBLL1Q53SF7 1204 aa16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 CNBD1Q8NA66 436 aa16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 TRIM47Q96LD4 638 aa16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 EYA3Q99504 573 aa16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 C7orf25Q9BPX7 421 aa16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 PARD6BQ9BYG5 372 aa16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 CAPN11Q9UMQ6 739 aa16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 LUC7L2Q9Y383 392 aaKnown RBP16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 BTAF1O14981 1849 aa16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 BAZ2BQ9UIF8 2168 aaKnown RBP16.49■□□□□ 0.23
NT5C3A-208ENST00000456458 SBF2Q86WG5 1849 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 PLA2G4AP47712 749 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 CDK8P49336 464 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 ZNF662Q6ZS27 426 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 NEK8Q86SG6 692 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 TBC1D22AQ8WUA7 517 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 HNRNPLLQ8WVV9 542 aaKnown RBP16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 FAM163AQ96GL9 167 aaPredicted RBP16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 EXOC1Q9NV70 894 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 EPN1Q9Y6I3 576 aaPredicted RBP16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 LTBP4Q8N2S1 1624 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 SMCO2A6NFE2 343 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 ERLIN1O75477 346 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 IL1R1P14778 569 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 ADRA2BP18089 450 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 CCNE1P24864 410 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 CDC25AP30304 524 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 BTDP43251 543 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 KRT83P78385 493 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 DIXDC1Q155Q3 683 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 SLC4A8Q2Y0W8 1093 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 IRF2BP1Q8IU81 584 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 MAPKAPK5Q8IW41 473 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 TEX11Q8IYF3 940 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 EHBP1Q8NDI1 1231 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 ZNF507Q8TCN5 953 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 RPGRQ92834 1020 aaKnown RBP16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 DNAJC7Q99615 494 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 HAUS4Q9H6D7 363 aa16.48■□□□□ 0.23
NT5C3A-208ENST00000456458 TNRC6CQ9HCJ0 1690 aaKnown RBP16.47■□□□□ 0.23
NT5C3A-208ENST00000456458 NOVP48745 357 aa16.47■□□□□ 0.23
NT5C3A-208ENST00000456458 SLC35G1Q2M3R5 365 aa16.47■□□□□ 0.23
NT5C3A-208ENST00000456458 TTI2Q6NXR4 508 aa16.47■□□□□ 0.23
NT5C3A-208ENST00000456458 CNNM4Q6P4Q7 775 aa16.47■□□□□ 0.23
NT5C3A-208ENST00000456458 SMIM5Q71RC9 77 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms