RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ESYT3A0FGR9 886 aa11.5□□□□□ -0.57
CLIP4-208ENST00000456385 ADAMTS3O15072 1205 aa11.5□□□□□ -0.57
CLIP4-208ENST00000456385 PLEKHA8P1O95397 391 aa11.5□□□□□ -0.57
CLIP4-208ENST00000456385 MCM7P33993 719 aa11.5□□□□□ -0.57
CLIP4-208ENST00000456385 ATP2C1P98194 919 aaPredicted RBP11.5□□□□□ -0.57
CLIP4-208ENST00000456385 ALX1Q15699 326 aa11.5□□□□□ -0.57
CLIP4-208ENST00000456385 ALS2CLQ60I27 953 aa11.5□□□□□ -0.57
CLIP4-208ENST00000456385 ADSSL1Q8N142 457 aa11.5□□□□□ -0.57
CLIP4-208ENST00000456385 OSBPL9Q96SU4 736 aa11.5□□□□□ -0.57
CLIP4-208ENST00000456385 EPN3Q9H201 632 aa11.5□□□□□ -0.57
CLIP4-208ENST00000456385 MYH7P12883 1935 aa11.5□□□□□ -0.57
CLIP4-208ENST00000456385 AKAP11Q9UKA4 1901 aa11.5□□□□□ -0.57
CLIP4-208ENST00000456385 LMTK3Q96Q04 1460 aa11.5□□□□□ -0.57
CLIP4-208ENST00000456385 RGPD5Q99666 1765 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 SCP2P22307 547 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 VAV2P52735 878 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 HDLBPQ00341 1268 aaKnown RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 IFT88Q13099 833 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 NPY5RQ15761 445 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 EMBQ6PCB8 327 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 FNBP4Q8N3X1 1017 aaPredicted RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 TTLL11Q8NHH1 800 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 ZNF473Q8WTR7 871 aaKnown RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 MS4A14Q96JA4 679 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 TRIM47Q96LD4 638 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 CCDC43Q96MW1 224 aaKnown RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 RNF26Q9BY78 433 aaPredicted RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 CENPHQ9H3R5 247 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 RBM12Q9NTZ6 932 aaKnown RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 ZNHIT6Q9NWK9 470 aaKnown RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 NUTM2BA6NNL0 878 aaPredicted RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 NUTM2EB1AL46 878 aaPredicted RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 SNAP23O00161 211 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 GLI1P08151 1106 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 SRGNP10124 158 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 CARSP49589 748 aaKnown RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 ACTN3Q08043 901 aaPredicted RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 TBC1D8BQ0IIM8 1120 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 LCORLQ8N3X6 602 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 ANKRD13CQ8N6S4 541 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 TRIM58Q8NG06 486 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 HELBQ8NG08 1087 aaPredicted RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 TNFRSF25Q93038 417 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 PCMTD1Q96MG8 357 aaPredicted RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 CCT8L2Q96SF2 557 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 TUBGCP2Q9BSJ2 902 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 GREM2Q9H772 168 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 A1CFQ9NQ94 594 aaKnown RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 CNNM1Q9NRU3 951 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 KLC4Q9NSK0 619 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 NFU1Q9UMS0 254 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 ATXN2Q99700 1313 aaKnown RBP11.49□□□□□ -0.57
CLIP4-208ENST00000456385 CAMTA1Q9Y6Y1 1673 aa11.49□□□□□ -0.57
CLIP4-208ENST00000456385 CSB-PGBD3P0DP91 1061 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 XBP1P17861 261 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 ITGA6P23229 1130 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 EEF1GP26641 437 aaKnown RBP11.48□□□□□ -0.57
CLIP4-208ENST00000456385 DNM2P50570 870 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 GUCY2FP51841 1108 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 FUT2Q10981 343 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 SF3B2Q13435 895 aaKnown RBP11.48□□□□□ -0.57
CLIP4-208ENST00000456385 CCDC181Q5TID7 509 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 TYW1BQ6NUM6 668 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 PIK3AP1Q6ZUJ8 805 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 ZNF572Q7Z3I7 529 aaPredicted RBP11.48□□□□□ -0.57
CLIP4-208ENST00000456385 CCDC13Q8IYE1 715 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 CCDC170Q8IYT3 715 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 IQCKQ8N0W5 287 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 GIMAP7Q8NHV1 300 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 STAG1Q8WVM7 1258 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 IFT81Q8WYA0 676 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 CAVIN3Q969G5 261 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 CCDC42Q96M95 316 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 PLIN2Q99541 437 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 UBAC1Q9BSL1 405 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 ISCA1Q9BUE6 129 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 IFIH1Q9BYX4 1025 aaKnown RBP11.48□□□□□ -0.57
CLIP4-208ENST00000456385 EXOC1Q9NV70 894 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 RMND1Q9NWS8 449 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 SALL4Q9UJQ4 1053 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 CHUKO15111 745 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 ZPR1O75312 459 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 PPP1R37O75864 691 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 CSF1RP07333 972 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 VEGFAP15692 232 aaPredicted RBP11.48□□□□□ -0.57
CLIP4-208ENST00000456385 ZBED6P86452 979 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 SPA17Q15506 151 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 TRADDQ15628 312 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 PTGISQ16647 500 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 CCDC40Q4G0X9 1142 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 C8orf74Q6P047 294 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 KDM7AQ6ZMT4 941 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 MIGA1Q8NAN2 632 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 PIK3R5Q8WYR1 880 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 SH2D4AQ9H788 454 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 VCPKMTQ9H867 229 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 MAGEC2Q9UBF1 373 aaPredicted RBP11.48□□□□□ -0.57
CLIP4-208ENST00000456385 SLC4A4Q9Y6R1 1079 aa11.48□□□□□ -0.57
CLIP4-208ENST00000456385 TNKSO95271 1327 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms