RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 TXKP42681 527 aa13.53□□□□□ -0.24
NEDD4L-208ENST00000456173 USP14P54578 494 aa13.53□□□□□ -0.24
NEDD4L-208ENST00000456173 DEUP1Q05D60 604 aa13.53□□□□□ -0.24
NEDD4L-208ENST00000456173 ITIH3Q06033 890 aa13.53□□□□□ -0.24
NEDD4L-208ENST00000456173 TNNI3KQ59H18 835 aa13.53□□□□□ -0.24
NEDD4L-208ENST00000456173 NME8Q8N427 588 aa13.53□□□□□ -0.24
NEDD4L-208ENST00000456173 ECT2Q9H8V3 914 aa13.53□□□□□ -0.24
NEDD4L-208ENST00000456173 DAAM1Q9Y4D1 1078 aa13.53□□□□□ -0.24
NEDD4L-208ENST00000456173 FPGT-TNNI3KV9GXZ4 949 aa13.53□□□□□ -0.24
NEDD4L-208ENST00000456173 STXBP3O00186 592 aa13.52□□□□□ -0.24
NEDD4L-208ENST00000456173 KRT5P13647 590 aa13.52□□□□□ -0.24
NEDD4L-208ENST00000456173 PCYT1AP49585 367 aa13.52□□□□□ -0.24
NEDD4L-208ENST00000456173 ESRRGP62508 458 aa13.52□□□□□ -0.24
NEDD4L-208ENST00000456173 CMTR1Q8N1G2 835 aaKnown RBP13.52□□□□□ -0.24
NEDD4L-208ENST00000456173 ZNF513Q8N8E2 541 aaPredicted RBP13.52□□□□□ -0.24
NEDD4L-208ENST00000456173 P3H4Q92791 437 aa13.52□□□□□ -0.24
NEDD4L-208ENST00000456173 CCT8L2Q96SF2 557 aa13.52□□□□□ -0.24
NEDD4L-208ENST00000456173 GMNNO75496 209 aa13.52□□□□□ -0.24
NEDD4L-208ENST00000456173 GRAMD1BQ3KR37 738 aa13.52□□□□□ -0.24
NEDD4L-208ENST00000456173 KIF2CQ99661 725 aa13.52□□□□□ -0.24
NEDD4L-208ENST00000456173 ETNK1Q9HBU6 452 aa13.52□□□□□ -0.24
NEDD4L-208ENST00000456173 AATFQ9NY61 560 aaKnown RBP eCLIP13.52□□□□□ -0.24
NEDD4L-208ENST00000456173 NOS1P29475 1434 aa13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 PPP1R37O75864 691 aa13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 IFNB1P01574 187 aa13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 STMN1P16949 149 aa13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 ATICP31939 592 aa13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 RESTQ13127 1097 aa13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 CRACR2BQ8N4Y2 399 aaPredicted RBP13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 MAGEB6Q8N7X4 407 aa13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 TUBGCP2Q9BSJ2 902 aa13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 AP1M1Q9BXS5 423 aa13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 RASGRF2O14827 1237 aa13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 MFAP3LO75121 409 aa13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 PPP2R5EQ16537 467 aa13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 ARHGEF18Q6ZSZ5 1173 aa13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 IQCDQ96DY2 449 aa13.52□□□□□ -0.25
NEDD4L-208ENST00000456173 SPDYE3A6NKU9 549 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 DKC1O60832 514 aaKnown RBP eCLIP13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 APOEP02649 317 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 SLC20A2Q08357 652 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 HIPK4Q8NE63 616 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 ENOX1Q8TC92 643 aaKnown RBP13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 PDIA3P30101 505 aaKnown RBP13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 FAM47EQ6ZV65 393 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 SIRT2Q8IXJ6 389 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 TRIML2Q8N7C3 387 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 NUDCD1Q96RS6 583 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 LBHD1Q9BQE6 289 aaPredicted RBP13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 NHEJ1Q9H9Q4 299 aaPredicted RBP13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 WASLO00401 505 aaPredicted RBP13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 CYP2E1P05181 493 aaPredicted RBP13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 SNX1Q13596 522 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 ARHGAP44Q17R89 818 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 HERC4Q5GLZ8 1057 aaPredicted RBP13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 KBTBD3Q8NAB2 608 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 NEK9Q8TD19 979 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 SNRNP27Q8WVK2 155 aaKnown RBP13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 MLXIPLQ9NP71 852 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 SART1O43290 800 aaKnown RBP13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 PARP1P09874 1014 aaKnown RBP13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 NBPF6Q5VWK0 638 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 NSUN7Q8NE18 718 aaKnown RBP13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 NSMCE1Q8WV22 266 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 DTNBP1Q96EV8 351 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 NBPF4Q96M43 638 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 EPN3Q9H201 632 aa13.51□□□□□ -0.25
NEDD4L-208ENST00000456173 NUP160Q12769 1436 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 MTF1Q14872 753 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 GEN1Q17RS7 908 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 CCDC93Q567U6 631 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 USP37Q86T82 979 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 ARHGEF25Q86VW2 580 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 NBPF5PQ86XG9 351 aaPredicted RBP13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 RUNDC3BQ96NL0 473 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 CRNKL1Q9BZJ0 848 aaKnown RBP13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 POLR3EQ9NVU0 708 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 FANCAO15360 1455 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 GPAA1O43292 621 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 CCNT1O60563 726 aaKnown RBP13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 STARD3NLO95772 234 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 ESRRAP11474 423 aaPredicted RBP13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 PDE6CP51160 858 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 LLGL1Q15334 1064 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 TMEM154Q6P9G4 183 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 DHX40Q8IX18 779 aaKnown RBP13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 TEKT1Q969V4 418 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 CFAP73A6NFT4 308 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 PGRMC1O00264 195 aaKnown RBP13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 MBD4O95243 580 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 PPP2R2AP63151 447 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 ATP6V1G3Q96LB4 118 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 ADGRG1Q9Y653 693 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 H2AFZP0C0S5 128 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 SEC24CP53992 1094 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 SLC8A3P57103 927 aa13.5□□□□□ -0.25
NEDD4L-208ENST00000456173 RNASELQ05823 741 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms