RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 CHST13Q8NET6 341 aa19.93■□□□□ 0.78
TVP23A-202ENST00000456096 NACAP1Q9BZK3 213 aa19.93■□□□□ 0.78
TVP23A-202ENST00000456096 FBXO40Q9UH90 709 aa19.93■□□□□ 0.78
TVP23A-202ENST00000456096 C6orf222P0C671 652 aaPredicted RBP19.92■□□□□ 0.78
TVP23A-202ENST00000456096 TFAP4Q01664 338 aa19.92■□□□□ 0.78
TVP23A-202ENST00000456096 PDE4BQ07343 736 aa19.92■□□□□ 0.78
TVP23A-202ENST00000456096 OTUD7AQ8TE49 926 aaPredicted RBP19.92■□□□□ 0.78
TVP23A-202ENST00000456096 MYLIPQ8WY64 445 aa19.92■□□□□ 0.78
TVP23A-202ENST00000456096 ABHD16BQ9H3Z7 469 aa19.92■□□□□ 0.78
TVP23A-202ENST00000456096 HOMER2Q9NSB8 354 aa19.92■□□□□ 0.78
TVP23A-202ENST00000456096 TMEM232C9JQI7 657 aa19.91■□□□□ 0.78
TVP23A-202ENST00000456096 CST5P28325 142 aaPredicted RBP19.91■□□□□ 0.78
TVP23A-202ENST00000456096 ARMCX2Q7L311 632 aa19.91■□□□□ 0.78
TVP23A-202ENST00000456096 MAFAQ8NHW3 353 aaPredicted RBP19.91■□□□□ 0.78
TVP23A-202ENST00000456096 PI4K2BQ8TCG2 481 aa19.91■□□□□ 0.78
TVP23A-202ENST00000456096 CHMP4CQ96CF2 233 aa19.91■□□□□ 0.78
TVP23A-202ENST00000456096 GLT1D1Q96MS3 346 aa19.91■□□□□ 0.78
TVP23A-202ENST00000456096 NAPBQ9H115 298 aa19.91■□□□□ 0.78
TVP23A-202ENST00000456096 ISY1Q9ULR0 285 aaKnown RBP19.91■□□□□ 0.78
TVP23A-202ENST00000456096 TTC41PQ6P2S7 1318 aa19.91■□□□□ 0.78
TVP23A-202ENST00000456096 PLIN4Q96Q06 1357 aa19.91■□□□□ 0.78
TVP23A-202ENST00000456096 SPTBN5Q9NRC6 3674 aaKnown RBP19.9■□□□□ 0.78
TVP23A-202ENST00000456096 CHD9Q3L8U1 2897 aa19.9■□□□□ 0.78
TVP23A-202ENST00000456096 TIMP1P01033 207 aa19.9■□□□□ 0.78
TVP23A-202ENST00000456096 ASGR1P07306 291 aa19.9■□□□□ 0.78
TVP23A-202ENST00000456096 SLC3A2P08195 630 aaKnown RBP19.9■□□□□ 0.78
TVP23A-202ENST00000456096 CDK7P50613 346 aa19.9■□□□□ 0.78
TVP23A-202ENST00000456096 GJA9P57773 515 aa19.9■□□□□ 0.78
TVP23A-202ENST00000456096 CNTN2Q02246 1040 aa19.9■□□□□ 0.78
TVP23A-202ENST00000456096 PPARAQ07869 468 aa19.9■□□□□ 0.78
TVP23A-202ENST00000456096 CCDC144CPQ8IYA2 1237 aa19.9■□□□□ 0.78
TVP23A-202ENST00000456096 PCSK9Q8NBP7 692 aaKnown RBP19.9■□□□□ 0.78
TVP23A-202ENST00000456096 VTI1AQ96AJ9 217 aa19.9■□□□□ 0.78
TVP23A-202ENST00000456096 FSD1Q9BTV5 496 aa19.9■□□□□ 0.78
TVP23A-202ENST00000456096 UPF3AQ9H1J1 476 aaKnown RBP19.9■□□□□ 0.78
TVP23A-202ENST00000456096 SPC25Q9HBM1 224 aa19.9■□□□□ 0.78
TVP23A-202ENST00000456096 TBX21Q9UL17 535 aa19.9■□□□□ 0.78
TVP23A-202ENST00000456096 PCDHB15Q9Y5E8 787 aa19.9■□□□□ 0.78
TVP23A-202ENST00000456096 ELP1O95163 1332 aa19.9■□□□□ 0.78
TVP23A-202ENST00000456096 ERC2O15083 957 aa19.89■□□□□ 0.77
TVP23A-202ENST00000456096 FDX1P10109 184 aa19.89■□□□□ 0.77
TVP23A-202ENST00000456096 GNASQ5JWF2 1037 aa19.89■□□□□ 0.77
TVP23A-202ENST00000456096 ZMYM1Q5SVZ6 1142 aa19.89■□□□□ 0.77
TVP23A-202ENST00000456096 FAM133AQ8N9E0 248 aa19.89■□□□□ 0.77
TVP23A-202ENST00000456096 AGBL1Q96MI9 1066 aa19.89■□□□□ 0.77
TVP23A-202ENST00000456096 KATNBL1Q9H079 304 aa19.89■□□□□ 0.77
TVP23A-202ENST00000456096 ACAD9Q9H845 621 aa19.89■□□□□ 0.77
TVP23A-202ENST00000456096 ZNF536O15090 1300 aa19.88■□□□□ 0.77
TVP23A-202ENST00000456096 MROH7Q68CQ1 1323 aa19.88■□□□□ 0.77
TVP23A-202ENST00000456096 MCCP23508 829 aa19.88■□□□□ 0.77
TVP23A-202ENST00000456096 STAT2P52630 851 aa19.88■□□□□ 0.77
TVP23A-202ENST00000456096 MFSD5Q6N075 450 aa19.88■□□□□ 0.77
TVP23A-202ENST00000456096 CHURC1Q8WUH1 139 aa19.88■□□□□ 0.77
TVP23A-202ENST00000456096 STAG1Q8WVM7 1258 aa19.88■□□□□ 0.77
TVP23A-202ENST00000456096 GMCL1Q96IK5 515 aa19.88■□□□□ 0.77
TVP23A-202ENST00000456096 A1CFQ9NQ94 594 aaKnown RBP19.88■□□□□ 0.77
TVP23A-202ENST00000456096 ARVCFO00192 962 aa19.87■□□□□ 0.77
TVP23A-202ENST00000456096 CTAGE5O15320 804 aa19.87■□□□□ 0.77
TVP23A-202ENST00000456096 SLC1A4P43007 532 aa19.87■□□□□ 0.77
TVP23A-202ENST00000456096 IKQ13123 557 aaPredicted RBP19.87■□□□□ 0.77
TVP23A-202ENST00000456096 FAM160B2Q86V87 743 aa19.87■□□□□ 0.77
TVP23A-202ENST00000456096 INCENPQ9NQS7 918 aa19.87■□□□□ 0.77
TVP23A-202ENST00000456096 RNF146Q9NTX7 359 aa19.87■□□□□ 0.77
TVP23A-202ENST00000456096 TMEM265A0A087WTH1 108 aa19.86■□□□□ 0.77
TVP23A-202ENST00000456096 A0A0U1RQG5 324 aaPredicted RBP19.86■□□□□ 0.77
TVP23A-202ENST00000456096 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.86■□□□□ 0.77
TVP23A-202ENST00000456096 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.86■□□□□ 0.77
TVP23A-202ENST00000456096 SOWAHBA6NEL2 793 aa19.86■□□□□ 0.77
TVP23A-202ENST00000456096 FOXP2O15409 715 aa19.86■□□□□ 0.77
TVP23A-202ENST00000456096 FOSL2P15408 326 aa19.86■□□□□ 0.77
TVP23A-202ENST00000456096 BEX3Q00994 111 aa19.86■□□□□ 0.77
TVP23A-202ENST00000456096 CTDSPL2Q05D32 466 aa19.86■□□□□ 0.77
TVP23A-202ENST00000456096 CCDC129Q6ZRS4 1044 aa19.86■□□□□ 0.77
TVP23A-202ENST00000456096 KCTD1Q719H9 257 aa19.86■□□□□ 0.77
TVP23A-202ENST00000456096 C16orf59Q7L2K0 433 aa19.86■□□□□ 0.77
TVP23A-202ENST00000456096 TRERF1Q96PN7 1200 aa19.86■□□□□ 0.77
TVP23A-202ENST00000456096 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.86■□□□□ 0.77
TVP23A-202ENST00000456096 IL17RBQ9NRM6 502 aa19.86■□□□□ 0.77
TVP23A-202ENST00000456096 STX8Q9UNK0 236 aa19.86■□□□□ 0.77
TVP23A-202ENST00000456096 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.86■□□□□ 0.77
TVP23A-202ENST00000456096 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.85■□□□□ 0.77
TVP23A-202ENST00000456096 NMT2O60551 498 aa19.85■□□□□ 0.77
TVP23A-202ENST00000456096 ALAS1P13196 640 aa19.85■□□□□ 0.77
TVP23A-202ENST00000456096 MX1P20591 662 aa19.85■□□□□ 0.77
TVP23A-202ENST00000456096 SNAP25P60880 206 aa19.85■□□□□ 0.77
TVP23A-202ENST00000456096 NKX3-2P78367 333 aa19.85■□□□□ 0.77
TVP23A-202ENST00000456096 TNFAIP2Q03169 654 aa19.85■□□□□ 0.77
TVP23A-202ENST00000456096 RCSD1Q6JBY9 416 aa19.85■□□□□ 0.77
TVP23A-202ENST00000456096 CCDC174Q6PII3 467 aa19.85■□□□□ 0.77
TVP23A-202ENST00000456096 NOL8Q76FK4 1167 aaKnown RBP19.85■□□□□ 0.77
TVP23A-202ENST00000456096 DDX49Q9Y6V7 483 aaKnown RBP19.85■□□□□ 0.77
TVP23A-202ENST00000456096 ASTN1O14525 1302 aa19.84■□□□□ 0.77
TVP23A-202ENST00000456096 TSPY2A6NKD2 308 aa19.84■□□□□ 0.77
TVP23A-202ENST00000456096 PLA2G6O60733 806 aa19.84■□□□□ 0.77
TVP23A-202ENST00000456096 DNAJB2P25686 324 aa19.84■□□□□ 0.77
TVP23A-202ENST00000456096 GRIN2CQ14957 1233 aa19.84■□□□□ 0.77
TVP23A-202ENST00000456096 TKFCQ3LXA3 575 aa19.84■□□□□ 0.77
TVP23A-202ENST00000456096 RASGRP2Q7LDG7 609 aa19.84■□□□□ 0.77
TVP23A-202ENST00000456096 FAM126BQ8IXS8 530 aa19.84■□□□□ 0.77
TVP23A-202ENST00000456096 PPP1R12CQ9BZL4 782 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms