RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 TTF1Q15361 905 aaPredicted RBP11.32□□□□□ -0.6
CHCHD4P3-201ENST00000455954 SAFBQ15424 915 aaKnown RBP eCLIP11.32□□□□□ -0.6
CHCHD4P3-201ENST00000455954 LONRF3Q496Y0 759 aa11.32□□□□□ -0.6
CHCHD4P3-201ENST00000455954 RGMBQ6NW40 437 aa11.32□□□□□ -0.6
CHCHD4P3-201ENST00000455954 WDR93Q6P2C0 686 aa11.32□□□□□ -0.6
CHCHD4P3-201ENST00000455954 PPFIBP1Q86W92 1011 aa11.32□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CNGA4Q8IV77 575 aa11.32□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CTCFLQ8NI51 663 aaPredicted RBP11.32□□□□□ -0.6
CHCHD4P3-201ENST00000455954 AIDAQ96BJ3 306 aa11.32□□□□□ -0.6
CHCHD4P3-201ENST00000455954 FOXP1Q9H334 677 aaPredicted RBP11.32□□□□□ -0.6
CHCHD4P3-201ENST00000455954 WBP1LQ9NX94 342 aa11.32□□□□□ -0.6
CHCHD4P3-201ENST00000455954 ADGRG1Q9Y653 693 aa11.32□□□□□ -0.6
CHCHD4P3-201ENST00000455954 MYH8P13535 1937 aa11.32□□□□□ -0.6
CHCHD4P3-201ENST00000455954 MYO1CO00159 1063 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 ZBTB43O43298 467 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 FMNL1O95466 1100 aaPredicted RBP11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 BMP15O95972 392 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 IFNAR1P17181 557 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 NF2P35240 595 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 HDLBPQ00341 1268 aaKnown RBP11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 FILIP1LQ4L180 1135 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 PRAMEF18Q5VWM3 479 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 SPATA1Q5VX52 437 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 APOA5Q6Q788 366 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 TOGARAM2Q6ZUX3 1019 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CHST3Q7LGC8 479 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 TMTC1Q8IUR5 882 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 PDILTQ8N807 584 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 WDR66Q8TBY9 1149 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CCDC102AQ96A19 550 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 PYM1Q9BRP8 204 aaKnown RBP11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 FAM107BQ9H098 131 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 FBXO2Q9UK22 296 aaPredicted RBP11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 L1RE1Q9UN81 338 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 SUGT1Q9Y2Z0 365 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 PCDHAC2Q9Y5I4 1007 aa11.31□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CLRN2A0PK11 232 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CTAGE9A4FU28 777 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 H3BQF6 201 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 ZBTB22O15209 634 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CRKP46108 304 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 AARSP49588 968 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 TIMM10P62072 90 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 PDE4BQ07343 736 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 SPAG1Q07617 926 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 SSRP1Q08945 709 aaKnown RBP11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 PPP2R5BQ15173 497 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 UBE3CQ15386 1083 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 NTRK3Q16288 839 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 GRIK5Q16478 980 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CDKAL1Q5VV42 579 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 FOXP4Q8IVH2 680 aaPredicted RBP11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 NOSTRINQ8IVI9 506 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 RUBCNQ92622 972 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 RPGRIP1Q96KN7 1286 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 MRIQ9BWK5 157 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 DEFB129Q9H1M3 183 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 YY1AP1Q9H869 796 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 ANKZF1Q9H8Y5 726 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 RRP15Q9Y3B9 282 aaKnown RBP11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 SRPRBQ9Y5M8 271 aaKnown RBP11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 PPP2R3BQ9Y5P8 575 aa11.3□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CTAGE15A4D2H0 777 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 GOLGA8AA7E2F4 631 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 GPAA1O43292 621 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 AOC2O75106 756 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 MFAP3LO75121 409 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CTAGE8P0CG41 777 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 BMP6P22004 513 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 ADD2P35612 726 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 PHKA1P46020 1223 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 LMAN1P49257 510 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 ZNF157P51786 506 aaPredicted RBP11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 NOGQ13253 232 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 TTLL12Q14166 644 aaPredicted RBP11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 SPDYE2Q495Y8 402 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 MAP9Q49MG5 647 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 HSP90B2PQ58FF3 399 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 ZNF662Q6ZS27 426 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CTAGE6Q86UF2 777 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CTAGE4Q8IX94 777 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 TEKT1Q969V4 418 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 XAGE2Q96GT9 111 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 NAPGQ99747 312 aaPredicted RBP11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 BEGAINQ9BUH8 593 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 TRIM34Q9BYJ4 488 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CNNM2Q9H8M5 875 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 MRPL44Q9H9J2 332 aaKnown RBP11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 VEZTQ9HBM0 779 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 BRMS1Q9HCU9 246 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 GPHNQ9NQX3 736 aaPredicted RBP11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 AATFQ9NY61 560 aaKnown RBP eCLIP11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 DENND2AQ9ULE3 1009 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CEP350Q5VT06 3117 aa11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 COL1A1P02452 1464 aaPredicted RBP11.29□□□□□ -0.6
CHCHD4P3-201ENST00000455954 THSD7BQ9C0I4 1608 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CCDC196A0A1B0GTZ2 297 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 FAM155AB1AL88 458 aaPredicted RBP11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 FOXN1O15353 648 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 ACTN4O43707 911 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms