RNA–Protein interactions for RNA: ENST00000455768.6

YIPF3-204, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-204ENST00000455768 CNTN2Q02246 1040 aa24.08■■□□□ 1.45
YIPF3-204ENST00000455768 ACVR2BQ13705 512 aa24.08■■□□□ 1.45
YIPF3-204ENST00000455768 CHST13Q8NET6 341 aa24.08■■□□□ 1.45
YIPF3-204ENST00000455768 AGBL1Q96MI9 1066 aa24.08■■□□□ 1.45
YIPF3-204ENST00000455768 CRBNQ96SW2 442 aa24.08■■□□□ 1.45
YIPF3-204ENST00000455768 UNC80Q8N2C7 3258 aa24.08■■□□□ 1.44
YIPF3-204ENST00000455768 DLL1O00548 723 aa24.07■■□□□ 1.44
YIPF3-204ENST00000455768 SLC3A2P08195 630 aaKnown RBP24.07■■□□□ 1.44
YIPF3-204ENST00000455768 SNAP25P60880 206 aa24.07■■□□□ 1.44
YIPF3-204ENST00000455768 KCNA10Q16322 511 aa24.07■■□□□ 1.44
YIPF3-204ENST00000455768 ANKRD45Q5TZF3 282 aa24.07■■□□□ 1.44
YIPF3-204ENST00000455768 GMCL1Q96IK5 515 aa24.07■■□□□ 1.44
YIPF3-204ENST00000455768 TSEN34Q9BSV6 310 aaKnown RBP24.07■■□□□ 1.44
YIPF3-204ENST00000455768 KATNBL1Q9H079 304 aa24.07■■□□□ 1.44
YIPF3-204ENST00000455768 FBXO40Q9UH90 709 aa24.07■■□□□ 1.44
YIPF3-204ENST00000455768 ISY1Q9ULR0 285 aaKnown RBP24.07■■□□□ 1.44
YIPF3-204ENST00000455768 KIAA0355O15063 1070 aa24.06■■□□□ 1.44
YIPF3-204ENST00000455768 DUSP11O75319 330 aaKnown RBP24.06■■□□□ 1.44
YIPF3-204ENST00000455768 SLC1A4P43007 532 aa24.06■■□□□ 1.44
YIPF3-204ENST00000455768 STAT2P52630 851 aa24.06■■□□□ 1.44
YIPF3-204ENST00000455768 FAAP100Q0VG06 881 aa24.06■■□□□ 1.44
YIPF3-204ENST00000455768 CCDC144BQ3MJ40 725 aa24.06■■□□□ 1.44
YIPF3-204ENST00000455768 KCTD1Q719H9 257 aa24.06■■□□□ 1.44
YIPF3-204ENST00000455768 ARMCX2Q7L311 632 aa24.06■■□□□ 1.44
YIPF3-204ENST00000455768 CCDC144CPQ8IYA2 1237 aa24.06■■□□□ 1.44
YIPF3-204ENST00000455768 STX8Q9UNK0 236 aa24.06■■□□□ 1.44
YIPF3-204ENST00000455768 DDX49Q9Y6V7 483 aaKnown RBP24.06■■□□□ 1.44
YIPF3-204ENST00000455768 ANKRD33Q7Z3H0 272 aa24.05■■□□□ 1.44
YIPF3-204ENST00000455768 FAM133AQ8N9E0 248 aa24.05■■□□□ 1.44
YIPF3-204ENST00000455768 STAG1Q8WVM7 1258 aa24.05■■□□□ 1.44
YIPF3-204ENST00000455768 ABHD16BQ9H3Z7 469 aa24.05■■□□□ 1.44
YIPF3-204ENST00000455768 A1CFQ9NQ94 594 aaKnown RBP24.05■■□□□ 1.44
YIPF3-204ENST00000455768 STARD7Q9NQZ5 370 aa24.05■■□□□ 1.44
YIPF3-204ENST00000455768 ASTN1O14525 1302 aa24.05■■□□□ 1.44
YIPF3-204ENST00000455768 TSPY2A6NKD2 308 aa24.04■■□□□ 1.44
YIPF3-204ENST00000455768 CTAGE5O15320 804 aa24.04■■□□□ 1.44
YIPF3-204ENST00000455768 CST5P28325 142 aaPredicted RBP24.04■■□□□ 1.44
YIPF3-204ENST00000455768 PDE1AP54750 535 aa24.04■■□□□ 1.44
YIPF3-204ENST00000455768 FAM160B2Q86V87 743 aa24.04■■□□□ 1.44
YIPF3-204ENST00000455768 ACAD9Q9H845 621 aa24.04■■□□□ 1.44
YIPF3-204ENST00000455768 RNF146Q9NTX7 359 aa24.04■■□□□ 1.44
YIPF3-204ENST00000455768 ANAPC4Q9UJX5 808 aa24.04■■□□□ 1.44
YIPF3-204ENST00000455768 EYSQ5T1H1 3165 aa24.04■■□□□ 1.44
YIPF3-204ENST00000455768 CDH23Q9H251 3354 aa24.03■■□□□ 1.44
YIPF3-204ENST00000455768 SOWAHBA6NEL2 793 aa24.03■■□□□ 1.44
YIPF3-204ENST00000455768 MOXD2PA6NHM9 499 aa24.03■■□□□ 1.44
YIPF3-204ENST00000455768 C6orf222P0C671 652 aaPredicted RBP24.03■■□□□ 1.44
YIPF3-204ENST00000455768 NOVP48745 357 aa24.03■■□□□ 1.44
YIPF3-204ENST00000455768 IKQ13123 557 aaPredicted RBP24.03■■□□□ 1.44
YIPF3-204ENST00000455768 CHURC1Q8WUH1 139 aa24.03■■□□□ 1.44
YIPF3-204ENST00000455768 EVI5LQ96CN4 794 aa24.03■■□□□ 1.44
YIPF3-204ENST00000455768 FAM227BQ96M60 508 aa24.03■■□□□ 1.44
YIPF3-204ENST00000455768 TOX2Q96NM4 488 aa24.03■■□□□ 1.44
YIPF3-204ENST00000455768 UPF3AQ9H1J1 476 aaKnown RBP24.03■■□□□ 1.44
YIPF3-204ENST00000455768 TMEM39AQ9NV64 488 aa24.03■■□□□ 1.44
YIPF3-204ENST00000455768 A0A0D9SFI3 127 aa24.02■■□□□ 1.44
YIPF3-204ENST00000455768 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.02■■□□□ 1.44
YIPF3-204ENST00000455768 FDX1P10109 184 aa24.02■■□□□ 1.44
YIPF3-204ENST00000455768 RAG1P15918 1043 aa24.02■■□□□ 1.44
YIPF3-204ENST00000455768 PTGS1P23219 599 aa24.02■■□□□ 1.44
YIPF3-204ENST00000455768 MUM1L1Q5H9M0 696 aa24.02■■□□□ 1.44
YIPF3-204ENST00000455768 ZNF697Q5TEC3 545 aa24.02■■□□□ 1.44
YIPF3-204ENST00000455768 RCSD1Q6JBY9 416 aa24.02■■□□□ 1.44
YIPF3-204ENST00000455768 NUP133Q8WUM0 1156 aa24.02■■□□□ 1.44
YIPF3-204ENST00000455768 PRR12Q9ULL5 1215 aa24.02■■□□□ 1.44
YIPF3-204ENST00000455768 MTMR7Q9Y216 660 aa24.02■■□□□ 1.44
YIPF3-204ENST00000455768 RANBP6O60518 1105 aaKnown RBP24.01■■□□□ 1.43
YIPF3-204ENST00000455768 PLA2G6O60733 806 aa24.01■■□□□ 1.43
YIPF3-204ENST00000455768 ASGR1P07306 291 aa24.01■■□□□ 1.43
YIPF3-204ENST00000455768 FGRP09769 529 aa24.01■■□□□ 1.43
YIPF3-204ENST00000455768 ALAS1P13196 640 aa24.01■■□□□ 1.43
YIPF3-204ENST00000455768 GJA9P57773 515 aa24.01■■□□□ 1.43
YIPF3-204ENST00000455768 CCDC174Q6PII3 467 aa24.01■■□□□ 1.43
YIPF3-204ENST00000455768 TRERF1Q96PN7 1200 aa24.01■■□□□ 1.43
YIPF3-204ENST00000455768 TTYH1Q9H313 450 aaPredicted RBP24.01■■□□□ 1.43
YIPF3-204ENST00000455768 TBX21Q9UL17 535 aa24.01■■□□□ 1.43
YIPF3-204ENST00000455768 ORC4O43929 436 aa24■■□□□ 1.43
YIPF3-204ENST00000455768 CDK7P50613 346 aa24■■□□□ 1.43
YIPF3-204ENST00000455768 SMAD3P84022 425 aaKnown RBP24■■□□□ 1.43
YIPF3-204ENST00000455768 HDAC1Q13547 482 aaPredicted RBP24■■□□□ 1.43
YIPF3-204ENST00000455768 ALX1Q15699 326 aa24■■□□□ 1.43
YIPF3-204ENST00000455768 PURBQ96QR8 312 aaKnown RBP24■■□□□ 1.43
YIPF3-204ENST00000455768 SEMA6BQ9H3T3 888 aa24■■□□□ 1.43
YIPF3-204ENST00000455768 DCDC2CA8MYV0 355 aa23.99■■□□□ 1.43
YIPF3-204ENST00000455768 FGAP02671 866 aa23.99■■□□□ 1.43
YIPF3-204ENST00000455768 FPGSQ05932 587 aa23.99■■□□□ 1.43
YIPF3-204ENST00000455768 GNASQ5JWF2 1037 aa23.99■■□□□ 1.43
YIPF3-204ENST00000455768 TTBK2Q6IQ55 1244 aa23.99■■□□□ 1.43
YIPF3-204ENST00000455768 ZNF589Q86UQ0 364 aaPredicted RBP23.99■■□□□ 1.43
YIPF3-204ENST00000455768 RNPC3Q96LT9 517 aaKnown RBP23.99■■□□□ 1.43
YIPF3-204ENST00000455768 GLT1D1Q96MS3 346 aa23.99■■□□□ 1.43
YIPF3-204ENST00000455768 CDX2Q99626 313 aaPredicted RBP23.99■■□□□ 1.43
YIPF3-204ENST00000455768 HELLSQ9NRZ9 838 aa23.99■■□□□ 1.43
YIPF3-204ENST00000455768 ELP1O95163 1332 aa23.99■■□□□ 1.43
YIPF3-204ENST00000455768 NKX3-2P78367 333 aa23.98■■□□□ 1.43
YIPF3-204ENST00000455768 BEX3Q00994 111 aa23.98■■□□□ 1.43
YIPF3-204ENST00000455768 TMEM63BQ5T3F8 832 aa23.98■■□□□ 1.43
YIPF3-204ENST00000455768 PCSK9Q8NBP7 692 aaKnown RBP23.98■■□□□ 1.43
YIPF3-204ENST00000455768 LRRC37A2A6NM11 1700 aa23.97■■□□□ 1.43
YIPF3-204ENST00000455768 SLC16A2P36021 539 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms