RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 DCAF4Q8WV16 495 aa15.2■□□□□ 0.02
CHD3-206ENST00000452447 ACAD9Q9H845 621 aa15.2■□□□□ 0.02
CHD3-206ENST00000452447 TCP11L1Q9NUJ3 509 aa15.2■□□□□ 0.02
CHD3-206ENST00000452447 MAGEA10P43363 369 aaPredicted RBP15.19■□□□□ 0.02
CHD3-206ENST00000452447 NOVP48745 357 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 LRRC41Q15345 812 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.19■□□□□ 0.02
CHD3-206ENST00000452447 ZNF467Q7Z7K2 595 aaPredicted RBP15.19■□□□□ 0.02
CHD3-206ENST00000452447 RNF180Q86T96 592 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 AGBL1Q96MI9 1066 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 PRKAG2Q9UGJ0 569 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 PRR12Q9ULL5 1215 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 ZNF865P0CJ78 1059 aaPredicted RBP15.19■□□□□ 0.02
CHD3-206ENST00000452447 ALAS1P13196 640 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 TKFCQ3LXA3 575 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 CCDC174Q6PII3 467 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 MAMDC4Q6UXC1 1216 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 SLC39A5Q6ZMH5 540 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 ESR2Q92731 530 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 FERMT2Q96AC1 680 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 TTC14Q96N46 770 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 TRERF1Q96PN7 1200 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 TMEM47Q9BQJ4 181 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 RNF146Q9NTX7 359 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 ZHX1Q9UKY1 873 aaPredicted RBP15.19■□□□□ 0.02
CHD3-206ENST00000452447 FAM184BQ9ULE4 1060 aa15.19■□□□□ 0.02
CHD3-206ENST00000452447 POTEB2H3BUK9 544 aa15.18■□□□□ 0.02
CHD3-206ENST00000452447 SNAI1O95863 264 aaPredicted RBP15.18■□□□□ 0.02
CHD3-206ENST00000452447 PGK1P00558 417 aa15.18■□□□□ 0.02
CHD3-206ENST00000452447 ADCYAP1R1P41586 468 aa15.18■□□□□ 0.02
CHD3-206ENST00000452447 RTP1P59025 263 aa15.18■□□□□ 0.02
CHD3-206ENST00000452447 RASGRP2Q7LDG7 609 aa15.18■□□□□ 0.02
CHD3-206ENST00000452447 UBE2OQ9C0C9 1292 aaKnown RBP15.18■□□□□ 0.02
CHD3-206ENST00000452447 ATP11BQ9Y2G3 1177 aa15.18■□□□□ 0.02
CHD3-206ENST00000452447 ZNF536O15090 1300 aa15.17■□□□□ 0.02
CHD3-206ENST00000452447 SNAP25P60880 206 aa15.17■□□□□ 0.02
CHD3-206ENST00000452447 IRX6P78412 446 aaPredicted RBP15.17■□□□□ 0.02
CHD3-206ENST00000452447 TBC1D10CQ8IV04 446 aa15.17■□□□□ 0.02
CHD3-206ENST00000452447 LBHD1Q9BQE6 289 aaPredicted RBP15.17■□□□□ 0.02
CHD3-206ENST00000452447 ABHD16BQ9H3Z7 469 aa15.17■□□□□ 0.02
CHD3-206ENST00000452447 A1CFQ9NQ94 594 aaKnown RBP15.17■□□□□ 0.02
CHD3-206ENST00000452447 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.17■□□□□ 0.02
CHD3-206ENST00000452447 LAMA2P24043 3122 aaKnown RBP15.16■□□□□ 0.02
CHD3-206ENST00000452447 SLC16A2P36021 539 aa15.16■□□□□ 0.02
CHD3-206ENST00000452447 NT5C2P49902 561 aa15.16■□□□□ 0.02
CHD3-206ENST00000452447 MDM2Q00987 491 aaPredicted RBP15.16■□□□□ 0.02
CHD3-206ENST00000452447 CNTN2Q02246 1040 aa15.16■□□□□ 0.02
CHD3-206ENST00000452447 ACVR2BQ13705 512 aa15.16■□□□□ 0.02
CHD3-206ENST00000452447 ARMCX2Q7L311 632 aa15.16■□□□□ 0.02
CHD3-206ENST00000452447 DSCC1Q9BVC3 393 aa15.16■□□□□ 0.02
CHD3-206ENST00000452447 GPCPD1Q9NPB8 672 aa15.16■□□□□ 0.02
CHD3-206ENST00000452447 CTNNA3Q9UI47 895 aa15.16■□□□□ 0.02
CHD3-206ENST00000452447 CCPG1Q9ULG6 757 aa15.16■□□□□ 0.02
CHD3-206ENST00000452447 FRMPD2Q68DX3 1309 aaPredicted RBP15.16■□□□□ 0.02
CHD3-206ENST00000452447 LAMA4Q16363 1823 aa15.16■□□□□ 0.02
CHD3-206ENST00000452447 IMMTQ16891 758 aaKnown RBP15.15■□□□□ 0.02
CHD3-206ENST00000452447 SYDE2Q5VT97 1194 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 TTBK2Q6IQ55 1244 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 BTNL9Q6UXG8 535 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 IQCA1Q86XH1 822 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 CCDC144CPQ8IYA2 1237 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 TDHQ8IZJ6 230 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 FAM133AQ8N9E0 248 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 LENG1Q96BZ8 264 aaPredicted RBP15.15■□□□□ 0.02
CHD3-206ENST00000452447 SPC25Q9HBM1 224 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 PHF24Q9UPV7 400 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 NEDD4P46934 1319 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 DUSP11O75319 330 aaKnown RBP15.15■□□□□ 0.02
CHD3-206ENST00000452447 ICAM1P05362 532 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 PDHBP11177 359 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 TRIM60Q495X7 471 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 CCDC178Q5BJE1 867 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 FGD4Q96M96 766 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 ZKSCAN3Q9BRR0 538 aa15.15■□□□□ 0.02
CHD3-206ENST00000452447 RANBP17Q9H2T7 1088 aaKnown RBP15.15■□□□□ 0.02
CHD3-206ENST00000452447 PRDM5Q9NQX1 630 aaPredicted RBP15.15■□□□□ 0.02
CHD3-206ENST00000452447 ASB14A6NK59 587 aa15.14■□□□□ 0.01
CHD3-206ENST00000452447 KDM4AO75164 1064 aa15.14■□□□□ 0.01
CHD3-206ENST00000452447 ADAMTS4O75173 837 aa15.14■□□□□ 0.01
CHD3-206ENST00000452447 PDE4AP27815 886 aa15.14■□□□□ 0.01
CHD3-206ENST00000452447 SNX17Q15036 470 aa15.14■□□□□ 0.01
CHD3-206ENST00000452447 CCDC144BQ3MJ40 725 aa15.14■□□□□ 0.01
CHD3-206ENST00000452447 TTC22Q5TAA0 569 aa15.14■□□□□ 0.01
CHD3-206ENST00000452447 C1orf53Q5VUE5 145 aa15.14■□□□□ 0.01
CHD3-206ENST00000452447 NSMFQ6X4W1 530 aa15.14■□□□□ 0.01
CHD3-206ENST00000452447 DGKHQ86XP1 1220 aa15.14■□□□□ 0.01
CHD3-206ENST00000452447 TSEN34Q9BSV6 310 aaKnown RBP15.14■□□□□ 0.01
CHD3-206ENST00000452447 CYP39A1Q9NYL5 469 aa15.14■□□□□ 0.01
CHD3-206ENST00000452447 SYNRGQ9UMZ2 1314 aa15.14■□□□□ 0.01
CHD3-206ENST00000452447 A0A1W2PQ45 241 aaPredicted RBP15.13■□□□□ 0.01
CHD3-206ENST00000452447 A0A1W2PQY0 241 aa15.13■□□□□ 0.01
CHD3-206ENST00000452447 C6orf222P0C671 652 aaPredicted RBP15.13■□□□□ 0.01
CHD3-206ENST00000452447 MUM1L1Q5H9M0 696 aa15.13■□□□□ 0.01
CHD3-206ENST00000452447 GPATCH4Q5T3I0 446 aaKnown RBP15.13■□□□□ 0.01
CHD3-206ENST00000452447 NUP133Q8WUM0 1156 aa15.13■□□□□ 0.01
CHD3-206ENST00000452447 PNMA2Q9UL42 364 aa15.13■□□□□ 0.01
CHD3-206ENST00000452447 SOWAHBA6NEL2 793 aa15.12■□□□□ 0.01
CHD3-206ENST00000452447 B4E1Z4 1266 aa15.12■□□□□ 0.01
CHD3-206ENST00000452447 SOX1O00570 391 aaPredicted RBP15.12■□□□□ 0.01
CHD3-206ENST00000452447 GSPT1P15170 499 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms