RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 SBNO2Q9Y2G9 1366 aa5.13□□□□□ -1.59
HMGB3P22-202ENST00000451823 REREQ9P2R6 1566 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 CLTCL1P53675 1640 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 TSPAN15O95858 294 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 ESR1P03372 595 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 PGRP06401 933 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 P4HBP07237 508 aaKnown RBP5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 CT47B1P0C2W7 299 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 ZSCAN22P10073 491 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 EIF4BP23588 611 aaKnown RBP5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 KIR3DL1P43629 444 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 HK2P52789 917 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 ZNF445P59923 1031 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 MVPQ14764 893 aaKnown RBP5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 CCDC85BQ15834 202 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 SLC6A19Q695T7 634 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 LCNL1Q6ZST4 164 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 CREG2Q8IUH2 290 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 SIAH1Q8IUQ4 282 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 CCDC146Q8IYE0 955 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 MYLIPQ8WY64 445 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 JARID2Q92833 1246 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 TNPO1Q92973 898 aaKnown RBP5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 FRMD6Q96NE9 622 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 KIF2CQ99661 725 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 DPH2Q9BQC3 489 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 DCP1AQ9NPI6 582 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 RNF19AQ9NV58 838 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 CEP131Q9UPN4 1083 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 YEATS2Q9ULM3 1422 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 MYOM2P54296 1465 aa5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 INO80Q9ULG1 1556 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P22-202ENST00000451823 PLEKHD1A6NEE1 506 aa5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 RAC2P15153 192 aa5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 SMAP1Q8IYB5 467 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 GZF1Q9H116 711 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 DUSP15Q9H1R2 295 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 NOL7Q9UMY1 257 aaKnown RBP5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 TNNQ9UQP3 1299 aa5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 AK5Q9Y6K8 562 aa5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 NRXN1Q9ULB1 1477 aa5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 SYCP2Q9BX26 1530 aa5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 VWDEQ8N2E2 1590 aa5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 CFAP74Q9C0B2 1584 aa5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 DEPDC5O75140 1603 aa5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 ABCA6Q8N139 1617 aa5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 IFT172Q9UG01 1749 aa5.11□□□□□ -1.59
HMGB3P22-202ENST00000451823 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 UPK3BL1B0FP48 263 aa5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 UPK3BL2E5RIL1 263 aa5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 NPIPB6E9PJ23 425 aa5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 TPP2P29144 1249 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 NOS1P29475 1434 aa5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 TRHRP34981 398 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 HNRNPMP52272 730 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 RPS26P62854 115 aaKnown RBP5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 KLHL40Q2TBA0 621 aa5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 ZC3H13Q5T200 1668 aaKnown RBP5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 ZNF518AQ6AHZ1 1483 aa5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 AGMOQ6ZNB7 445 aa5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 ATG14Q6ZNE5 492 aa5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 MCATQ8IVS2 390 aaKnown RBP5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 HSCBQ8IWL3 235 aa5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 MRPL41Q8IXM3 137 aaKnown RBP5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 TMEM87BQ96K49 555 aa5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 Q96M66 194 aa5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 GBP4Q96PP9 640 aa5.1□□□□□ -1.59
HMGB3P22-202ENST00000451823 PPRC1Q5VV67 1664 aaKnown RBP5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 MAP3K4Q9Y6R4 1608 aa5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 MED14O60244 1454 aa5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 ETV2O00321 342 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 HSP90AB1P08238 724 aaKnown RBP5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 GNA15P30679 374 aa5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 MCM5P33992 734 aa5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 RGL3Q3MIN7 710 aa5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 UTP14CQ5TAP6 766 aaKnown RBP5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 LILRA6Q6PI73 481 aa5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 TMPRSS7Q7RTY8 843 aa5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 MTERF4Q7Z6M4 381 aaKnown RBP5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 AEBP1Q8IUX7 1158 aa5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 PIWIL2Q8TC59 973 aaKnown RBP5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 RUNDC1Q96C34 613 aa5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 TRIM44Q96DX7 344 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 COX4I2Q96KJ9 171 aa5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 MIR1-1HGQ9H1L0 117 aa5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 C19orf44Q9H6X5 657 aa5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 SMG5Q9UPR3 1016 aaKnown RBP5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 TACC3Q9Y6A5 838 aa5.09□□□□□ -1.59
HMGB3P22-202ENST00000451823 TET3O43151 1660 aa5.08□□□□□ -1.6
HMGB3P22-202ENST00000451823 SETBP1Q9Y6X0 1596 aa5.08□□□□□ -1.6
HMGB3P22-202ENST00000451823 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB3P22-202ENST00000451823 PIK3R4Q99570 1358 aa5.08□□□□□ -1.6
HMGB3P22-202ENST00000451823 KIF16BQ96L93 1317 aa5.08□□□□□ -1.6
HMGB3P22-202ENST00000451823 DYNC1I1O14576 645 aa5.08□□□□□ -1.6
HMGB3P22-202ENST00000451823 LRRN2O75325 713 aa5.08□□□□□ -1.6
HMGB3P22-202ENST00000451823 TFE3P19532 575 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P22-202ENST00000451823 ETV3P41162 512 aa5.08□□□□□ -1.6
HMGB3P22-202ENST00000451823 NASPP49321 788 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P22-202ENST00000451823 LIG3P49916 1009 aa5.08□□□□□ -1.6
HMGB3P22-202ENST00000451823 MFAP1P55081 439 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms