RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 CCDC148Q8NFR7 591 aa13.64□□□□□ -0.23
COL27A1-202ENST00000451716 ATP6V0A2Q9Y487 856 aa13.64□□□□□ -0.23
COL27A1-202ENST00000451716 KLRG2A4D1S0 409 aaPredicted RBP13.64□□□□□ -0.23
COL27A1-202ENST00000451716 SMCO2A6NFE2 343 aa13.64□□□□□ -0.23
COL27A1-202ENST00000451716 AKR1B1P15121 316 aa13.64□□□□□ -0.23
COL27A1-202ENST00000451716 STAT6P42226 847 aa13.64□□□□□ -0.23
COL27A1-202ENST00000451716 NCBP1Q09161 790 aaKnown RBP13.64□□□□□ -0.23
COL27A1-202ENST00000451716 SPATA1Q5VX52 437 aa13.64□□□□□ -0.23
COL27A1-202ENST00000451716 SPECC1LQ69YQ0 1117 aa13.64□□□□□ -0.23
COL27A1-202ENST00000451716 DTHD1Q6ZMT9 781 aa13.64□□□□□ -0.23
COL27A1-202ENST00000451716 SLF2Q8IX21 1173 aa13.64□□□□□ -0.23
COL27A1-202ENST00000451716 CPLX3Q8WVH0 158 aa13.64□□□□□ -0.23
COL27A1-202ENST00000451716 TRERF1Q96PN7 1200 aa13.64□□□□□ -0.23
COL27A1-202ENST00000451716 GDAQ9Y2T3 454 aa13.64□□□□□ -0.23
COL27A1-202ENST00000451716 MYO1BO43795 1136 aa13.63□□□□□ -0.23
COL27A1-202ENST00000451716 SRGNP10124 158 aa13.63□□□□□ -0.23
COL27A1-202ENST00000451716 ARL6IP4Q66PJ3 421 aaKnown RBP13.63□□□□□ -0.23
COL27A1-202ENST00000451716 DPP8Q6V1X1 898 aaPredicted RBP13.63□□□□□ -0.23
COL27A1-202ENST00000451716 KIF18AQ8NI77 898 aa13.63□□□□□ -0.23
COL27A1-202ENST00000451716 MYCBPQ99417 103 aaPredicted RBP13.63□□□□□ -0.23
COL27A1-202ENST00000451716 TMX1Q9H3N1 280 aa13.63□□□□□ -0.23
COL27A1-202ENST00000451716 ZNF219Q9P2Y4 722 aaPredicted RBP13.63□□□□□ -0.23
COL27A1-202ENST00000451716 CEP83Q9Y592 693 aa13.63□□□□□ -0.23
COL27A1-202ENST00000451716 LONP1P36776 959 aaKnown RBP13.63□□□□□ -0.23
COL27A1-202ENST00000451716 TBX2Q13207 712 aaPredicted RBP13.63□□□□□ -0.23
COL27A1-202ENST00000451716 NR1I3Q14994 352 aa13.63□□□□□ -0.23
COL27A1-202ENST00000451716 JAKMIP3Q5VZ66 844 aa13.63□□□□□ -0.23
COL27A1-202ENST00000451716 APTXQ7Z2E3 356 aaKnown RBP13.63□□□□□ -0.23
COL27A1-202ENST00000451716 TMEM139Q8IV31 216 aa13.63□□□□□ -0.23
COL27A1-202ENST00000451716 FAM177A1Q8N128 213 aaPredicted RBP13.63□□□□□ -0.23
COL27A1-202ENST00000451716 TC2NQ8N9U0 490 aa13.63□□□□□ -0.23
COL27A1-202ENST00000451716 KCND1Q9NSA2 647 aa13.63□□□□□ -0.23
COL27A1-202ENST00000451716 BIN2Q9UBW5 565 aaPredicted RBP13.63□□□□□ -0.23
COL27A1-202ENST00000451716 ZNF215Q9UL58 517 aaPredicted RBP13.63□□□□□ -0.23
COL27A1-202ENST00000451716 MYH1P12882 1939 aa13.63□□□□□ -0.23
COL27A1-202ENST00000451716 CCNT1O60563 726 aaKnown RBP13.62□□□□□ -0.23
COL27A1-202ENST00000451716 CCT6AP40227 531 aaKnown RBP13.62□□□□□ -0.23
COL27A1-202ENST00000451716 NAALADL2Q58DX5 795 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 LRRC15Q8TF66 581 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 RRP36Q96EU6 259 aaKnown RBP13.62□□□□□ -0.23
COL27A1-202ENST00000451716 SPZ1Q9BXG8 430 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 USP40Q9NVE5 1235 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 TMEM260Q9NX78 707 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 PCDHAC2Q9Y5I4 1007 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 PSDA5PKW4 1024 aaPredicted RBP13.62□□□□□ -0.23
COL27A1-202ENST00000451716 TXLNAP40222 546 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 ATP2B2Q01814 1243 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 RNF217Q8TC41 542 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 COA7Q96BR5 231 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 COA1Q9GZY4 146 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 ZMYND12Q9H0C1 365 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 DBNDD1Q9H9R9 158 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 GPCPD1Q9NPB8 672 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 DISC1Q9NRI5 854 aa13.62□□□□□ -0.23
COL27A1-202ENST00000451716 SEC63Q9UGP8 760 aaKnown RBP13.62□□□□□ -0.23
COL27A1-202ENST00000451716 A0A1B0GTH6 734 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 G3V3G9 751 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 GTPBP6O43824 516 aaPredicted RBP13.61□□□□□ -0.23
COL27A1-202ENST00000451716 MMP10P09238 476 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 PDHBP11177 359 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 UBA7P41226 1012 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 GTF2A1P52655 376 aaPredicted RBP13.61□□□□□ -0.23
COL27A1-202ENST00000451716 CACNB3P54284 484 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 DCAF8Q5TAQ9 597 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 PSMD1Q99460 953 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 BAG1Q99933 345 aaPredicted RBP13.61□□□□□ -0.23
COL27A1-202ENST00000451716 MTMR4Q9NYA4 1195 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 BRWD3Q6RI45 1802 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 RPN1P04843 607 aaKnown RBP13.61□□□□□ -0.23
COL27A1-202ENST00000451716 NFIAQ12857 509 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 DAGLBQ8NCG7 672 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 LZTS2Q9BRK4 669 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 FAM196BA6NMK8 535 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 CDKAL1Q5VV42 579 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 TOGARAM2Q6ZUX3 1019 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 ZFPM1Q8IX07 1006 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 EEF2KMTQ96G04 330 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 DESI2Q9BSY9 194 aa13.61□□□□□ -0.23
COL27A1-202ENST00000451716 PRCPP42785 496 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 NT5C2P49902 561 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 SATB1Q01826 763 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 GABPAQ06546 454 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 MTF1Q14872 753 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 SHROOM1Q2M3G4 852 aaPredicted RBP13.6□□□□□ -0.23
COL27A1-202ENST00000451716 SOGA3Q5TF21 947 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 TBCKQ8TEA7 893 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 ANKRD7Q92527 254 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 PRDM16Q9HAZ2 1276 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 C6orf50Q9HD87 102 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 ADD3Q9UEY8 706 aaKnown RBP13.6□□□□□ -0.23
COL27A1-202ENST00000451716 DNAI1Q9UI46 699 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 TRIM49BA6NDI0 452 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 MPHOSPH10O00566 681 aaKnown RBP13.6□□□□□ -0.23
COL27A1-202ENST00000451716 FANCGO15287 622 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 RAD21O60216 631 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 APBA3O96018 575 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 RBL2Q08999 1139 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 DHX8Q14562 1220 aaKnown RBP13.6□□□□□ -0.23
COL27A1-202ENST00000451716 NONOQ15233 471 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL27A1-202ENST00000451716 GALNT17Q6IS24 598 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms