RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 LRRC26Q2I0M4 334 aa11.39□□□□□ -0.59
USP54-207ENST00000451492 ACAD9Q9H845 621 aa11.39□□□□□ -0.59
USP54-207ENST00000451492 CCPG1Q9ULG6 757 aa11.39□□□□□ -0.59
USP54-207ENST00000451492 LTBP2Q14767 1821 aa11.39□□□□□ -0.59
USP54-207ENST00000451492 ZNF536O15090 1300 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 RAD50Q92878 1312 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 ATP2A1O14983 1001 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 PDHBP11177 359 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 CAPN2P17655 700 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 CHMLP26374 656 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 OAZ1P54368 228 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 CNTN2Q02246 1040 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 PTH1RQ03431 593 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 MUM1L1Q5H9M0 696 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 SYDE2Q5VT97 1194 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 NSMFQ6X4W1 530 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 CHST13Q8NET6 341 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 FERMT2Q96AC1 680 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 TRERF1Q96PN7 1200 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 CPVLQ9H3G5 476 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 FBXO40Q9UH90 709 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 CNPY2Q9Y2B0 182 aa11.38□□□□□ -0.59
USP54-207ENST00000451492 DDX49Q9Y6V7 483 aaKnown RBP11.38□□□□□ -0.59
USP54-207ENST00000451492 TNKSO95271 1327 aa11.37□□□□□ -0.59
USP54-207ENST00000451492 PGK1P00558 417 aa11.37□□□□□ -0.59
USP54-207ENST00000451492 IGHA2P01877 340 aa11.37□□□□□ -0.59
USP54-207ENST00000451492 RARBP10826 455 aa11.37□□□□□ -0.59
USP54-207ENST00000451492 PCP11498 1178 aaKnown RBP11.37□□□□□ -0.59
USP54-207ENST00000451492 NOVP48745 357 aa11.37□□□□□ -0.59
USP54-207ENST00000451492 IQCA1Q86XH1 822 aa11.37□□□□□ -0.59
USP54-207ENST00000451492 PNMA1Q8ND90 353 aa11.37□□□□□ -0.59
USP54-207ENST00000451492 RUFY2Q8WXA3 655 aa11.37□□□□□ -0.59
USP54-207ENST00000451492 KAT14Q9H8E8 782 aa11.37□□□□□ -0.59
USP54-207ENST00000451492 A1CFQ9NQ94 594 aaKnown RBP11.37□□□□□ -0.59
USP54-207ENST00000451492 XPNPEP3Q9NQH7 507 aa11.37□□□□□ -0.59
USP54-207ENST00000451492 TCP11L1Q9NUJ3 509 aa11.37□□□□□ -0.59
USP54-207ENST00000451492 RBM27Q9P2N5 1060 aaKnown RBP11.37□□□□□ -0.59
USP54-207ENST00000451492 CTNNA3Q9UI47 895 aa11.37□□□□□ -0.59
USP54-207ENST00000451492 CEP290O15078 2479 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 DNAJC25-GNG10A0A024R161 153 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 POTEB2H3BUK9 544 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 DNM1LO00429 736 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 DHX16O60231 1041 aaKnown RBP11.36□□□□□ -0.59
USP54-207ENST00000451492 ZNF865P0CJ78 1059 aaPredicted RBP11.36□□□□□ -0.59
USP54-207ENST00000451492 FDX1P10109 184 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 COL6A1P12109 1028 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 AKR1A1P14550 325 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 ZNF543Q08ER8 600 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 LRRC41Q15345 812 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 USH1GQ495M9 461 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 ARMCX2Q7L311 632 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 CCDC144CPQ8IYA2 1237 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 FGD4Q96M96 766 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 PURBQ96QR8 312 aaKnown RBP11.36□□□□□ -0.59
USP54-207ENST00000451492 ZSCAN10Q96SZ4 725 aaPredicted RBP11.36□□□□□ -0.59
USP54-207ENST00000451492 UBAC1Q9BSL1 405 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 KRT23Q9C075 422 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 UBA5Q9GZZ9 404 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 RANBP17Q9H2T7 1088 aaKnown RBP11.36□□□□□ -0.59
USP54-207ENST00000451492 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.36□□□□□ -0.59
USP54-207ENST00000451492 ATP11BQ9Y2G3 1177 aa11.36□□□□□ -0.59
USP54-207ENST00000451492 DIS3Q9Y2L1 958 aaKnown RBP11.36□□□□□ -0.59
USP54-207ENST00000451492 SYNGAP1Q96PV0 1343 aa11.35□□□□□ -0.59
USP54-207ENST00000451492 PTPDC1A2A3K4 754 aa11.35□□□□□ -0.59
USP54-207ENST00000451492 PLA2G6O60733 806 aa11.35□□□□□ -0.59
USP54-207ENST00000451492 SNAI1O95863 264 aaPredicted RBP11.35□□□□□ -0.59
USP54-207ENST00000451492 ICAM1P05362 532 aa11.35□□□□□ -0.59
USP54-207ENST00000451492 ADCYAP1R1P41586 468 aa11.35□□□□□ -0.59
USP54-207ENST00000451492 RTP1P59025 263 aa11.35□□□□□ -0.59
USP54-207ENST00000451492 CYB5R4Q7L1T6 521 aa11.35□□□□□ -0.59
USP54-207ENST00000451492 EEPD1Q7L9B9 569 aa11.35□□□□□ -0.59
USP54-207ENST00000451492 ENAHQ8N8S7 591 aaPredicted RBP11.35□□□□□ -0.59
USP54-207ENST00000451492 ARRDC4Q8NCT1 418 aa11.35□□□□□ -0.59
USP54-207ENST00000451492 CNNM2Q9H8M5 875 aa11.35□□□□□ -0.59
USP54-207ENST00000451492 PRDM5Q9NQX1 630 aaPredicted RBP11.35□□□□□ -0.59
USP54-207ENST00000451492 ZSWIM5Q9P217 1185 aa11.35□□□□□ -0.59
USP54-207ENST00000451492 TAF6LQ9Y6J9 622 aa11.35□□□□□ -0.59
USP54-207ENST00000451492 SYNRGQ9UMZ2 1314 aa11.35□□□□□ -0.59
USP54-207ENST00000451492 SOWAHBA6NEL2 793 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 NFIBO00712 420 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 SGSM2O43147 1006 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 ADCY6O43306 1168 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 SLC34A2O95436 690 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 CYP21A2P08686 494 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 IRX5P78411 483 aaPredicted RBP11.34□□□□□ -0.59
USP54-207ENST00000451492 MDM2Q00987 491 aaPredicted RBP11.34□□□□□ -0.59
USP54-207ENST00000451492 TRDNQ13061 729 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 ACVR2BQ13705 512 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 TKFCQ3LXA3 575 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 IFIT1BQ5T764 474 aaKnown RBP11.34□□□□□ -0.59
USP54-207ENST00000451492 BTNL9Q6UXG8 535 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 SLC30A10Q6XR72 485 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 CHST3Q7LGC8 479 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 RALYLQ86SE5 291 aaKnown RBP11.34□□□□□ -0.59
USP54-207ENST00000451492 DGKHQ86XP1 1220 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 FBXO16Q8IX29 292 aaPredicted RBP11.34□□□□□ -0.59
USP54-207ENST00000451492 TTC14Q96N46 770 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 CYP39A1Q9NYL5 469 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 FAM184BQ9ULE4 1060 aa11.34□□□□□ -0.59
USP54-207ENST00000451492 ASTN1O14525 1302 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms