RNA–Protein interactions for RNA: ENST00000451491.2

TSSC4-207, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-207ENST00000451491 CPXCR1Q8N123 301 aa23.38■■□□□ 1.33
TSSC4-207ENST00000451491 CMTR1Q8N1G2 835 aaKnown RBP23.38■■□□□ 1.33
TSSC4-207ENST00000451491 TEX13BQ9BXU2 312 aa23.38■■□□□ 1.33
TSSC4-207ENST00000451491 RAVER2Q9HCJ3 691 aaKnown RBP23.38■■□□□ 1.33
TSSC4-207ENST00000451491 VAT1LQ9HCJ6 419 aa23.38■■□□□ 1.33
TSSC4-207ENST00000451491 STAT3P40763 770 aa23.37■■□□□ 1.33
TSSC4-207ENST00000451491 CCT2P78371 535 aaKnown RBP23.37■■□□□ 1.33
TSSC4-207ENST00000451491 CCNA1P78396 465 aa23.37■■□□□ 1.33
TSSC4-207ENST00000451491 LACTBP83111 547 aaPredicted RBP23.37■■□□□ 1.33
TSSC4-207ENST00000451491 CDC37Q16543 378 aaPredicted RBP23.37■■□□□ 1.33
TSSC4-207ENST00000451491 ME3Q16798 604 aa23.37■■□□□ 1.33
TSSC4-207ENST00000451491 CCDC174Q6PII3 467 aa23.37■■□□□ 1.33
TSSC4-207ENST00000451491 MOV10L1Q9BXT6 1211 aaKnown RBP23.37■■□□□ 1.33
TSSC4-207ENST00000451491 NCOA5Q9HCD5 579 aaKnown RBP23.37■■□□□ 1.33
TSSC4-207ENST00000451491 LIMCH1Q9UPQ0 1083 aa23.37■■□□□ 1.33
TSSC4-207ENST00000451491 PFKFB2O60825 505 aa23.36■■□□□ 1.33
TSSC4-207ENST00000451491 ICAM1P05362 532 aa23.36■■□□□ 1.33
TSSC4-207ENST00000451491 FUT2Q10981 343 aa23.36■■□□□ 1.33
TSSC4-207ENST00000451491 STK3Q13188 491 aa23.36■■□□□ 1.33
TSSC4-207ENST00000451491 SNRNP48Q6IEG0 339 aaKnown RBP23.36■■□□□ 1.33
TSSC4-207ENST00000451491 RIOX2Q8IUF8 465 aa23.36■■□□□ 1.33
TSSC4-207ENST00000451491 PORCNQ9H237 461 aa23.36■■□□□ 1.33
TSSC4-207ENST00000451491 SLKQ9H2G2 1235 aaPredicted RBP23.36■■□□□ 1.33
TSSC4-207ENST00000451491 ZSWIM8A7E2V4 1837 aa23.36■■□□□ 1.33
TSSC4-207ENST00000451491 SMCHD1A6NHR9 2005 aa23.36■■□□□ 1.33
TSSC4-207ENST00000451491 LARGE1O95461 756 aa23.35■■□□□ 1.33
TSSC4-207ENST00000451491 LBX1P52954 281 aa23.35■■□□□ 1.33
TSSC4-207ENST00000451491 QRICH1Q2TAL8 776 aa23.35■■□□□ 1.33
TSSC4-207ENST00000451491 CCDC82Q8N4S0 544 aa23.35■■□□□ 1.33
TSSC4-207ENST00000451491 SHCBP1Q8NEM2 672 aa23.35■■□□□ 1.33
TSSC4-207ENST00000451491 AGBL1Q96MI9 1066 aa23.35■■□□□ 1.33
TSSC4-207ENST00000451491 PIGSQ96S52 555 aa23.35■■□□□ 1.33
TSSC4-207ENST00000451491 CNTNAP5Q8WYK1 1306 aa23.35■■□□□ 1.33
TSSC4-207ENST00000451491 CASP8AP2Q9UKL3 1982 aa23.35■■□□□ 1.33
TSSC4-207ENST00000451491 ZBTB5O15062 677 aa23.34■■□□□ 1.33
TSSC4-207ENST00000451491 CD2BP2O95400 341 aaKnown RBP23.34■■□□□ 1.33
TSSC4-207ENST00000451491 SLC25A27O95847 323 aa23.34■■□□□ 1.33
TSSC4-207ENST00000451491 SCRN1Q12765 414 aa23.34■■□□□ 1.33
TSSC4-207ENST00000451491 NTRK3Q16288 839 aa23.34■■□□□ 1.33
TSSC4-207ENST00000451491 ERO1AQ96HE7 468 aa23.34■■□□□ 1.33
TSSC4-207ENST00000451491 EFCC1Q9HA90 598 aa23.34■■□□□ 1.33
TSSC4-207ENST00000451491 PNMA2Q9UL42 364 aa23.34■■□□□ 1.33
TSSC4-207ENST00000451491 RIPK3Q9Y572 518 aa23.34■■□□□ 1.33
TSSC4-207ENST00000451491 ERCC3P19447 782 aa23.33■■□□□ 1.33
TSSC4-207ENST00000451491 CTGFP29279 349 aa23.33■■□□□ 1.33
TSSC4-207ENST00000451491 MAPK4P31152 587 aa23.33■■□□□ 1.33
TSSC4-207ENST00000451491 COPB2P35606 906 aa23.33■■□□□ 1.33
TSSC4-207ENST00000451491 CAP1Q01518 475 aa23.33■■□□□ 1.33
TSSC4-207ENST00000451491 KIF22Q14807 665 aa23.33■■□□□ 1.33
TSSC4-207ENST00000451491 HOMER1Q86YM7 354 aa23.33■■□□□ 1.33
TSSC4-207ENST00000451491 CD99L2Q8TCZ2 262 aa23.33■■□□□ 1.33
TSSC4-207ENST00000451491 RRP36Q96EU6 259 aaKnown RBP23.33■■□□□ 1.33
TSSC4-207ENST00000451491 ARHGAP39Q9C0H5 1083 aa23.33■■□□□ 1.33
TSSC4-207ENST00000451491 CCPG1Q9ULG6 757 aa23.33■■□□□ 1.33
TSSC4-207ENST00000451491 PNMA6FA0A0J9YX94 578 aa23.33■■□□□ 1.32
TSSC4-207ENST00000451491 PSMC4P43686 418 aa23.33■■□□□ 1.32
TSSC4-207ENST00000451491 ZSCAN31Q96LW9 406 aaPredicted RBP23.33■■□□□ 1.32
TSSC4-207ENST00000451491 MROH8Q9H579 483 aa23.33■■□□□ 1.32
TSSC4-207ENST00000451491 DOCK3Q8IZD9 2030 aa23.32■■□□□ 1.32
TSSC4-207ENST00000451491 PPP1R11O60927 126 aaPredicted RBP23.32■■□□□ 1.32
TSSC4-207ENST00000451491 IFNAR1P17181 557 aa23.32■■□□□ 1.32
TSSC4-207ENST00000451491 MCM2P49736 904 aa23.32■■□□□ 1.32
TSSC4-207ENST00000451491 FCGRTP55899 365 aa23.32■■□□□ 1.32
TSSC4-207ENST00000451491 TKFCQ3LXA3 575 aa23.32■■□□□ 1.32
TSSC4-207ENST00000451491 NCAPG2Q86XI2 1143 aa23.32■■□□□ 1.32
TSSC4-207ENST00000451491 FBXO11Q86XK2 927 aa23.32■■□□□ 1.32
TSSC4-207ENST00000451491 CCAR1Q8IX12 1150 aaKnown RBP23.32■■□□□ 1.32
TSSC4-207ENST00000451491 NECAB1Q8N987 351 aa23.32■■□□□ 1.32
TSSC4-207ENST00000451491 GTF3C6Q969F1 213 aa23.32■■□□□ 1.32
TSSC4-207ENST00000451491 SH2B1Q9NRF2 756 aaPredicted RBP23.32■■□□□ 1.32
TSSC4-207ENST00000451491 PLXNB2O15031 1838 aa23.31■■□□□ 1.32
TSSC4-207ENST00000451491 CPLX1O14810 134 aa23.31■■□□□ 1.32
TSSC4-207ENST00000451491 SLC4A3P48751 1232 aa23.31■■□□□ 1.32
TSSC4-207ENST00000451491 GPR142Q7Z601 462 aa23.31■■□□□ 1.32
TSSC4-207ENST00000451491 PIBF1Q8WXW3 757 aa23.31■■□□□ 1.32
TSSC4-207ENST00000451491 TRIM47Q96LD4 638 aa23.31■■□□□ 1.32
TSSC4-207ENST00000451491 AMNQ9BXJ7 453 aa23.31■■□□□ 1.32
TSSC4-207ENST00000451491 SEC63Q9UGP8 760 aaKnown RBP23.31■■□□□ 1.32
TSSC4-207ENST00000451491 TNPO2O14787 897 aaKnown RBP23.3■■□□□ 1.32
TSSC4-207ENST00000451491 ECM2O94769 699 aaPredicted RBP23.3■■□□□ 1.32
TSSC4-207ENST00000451491 ALAS1P13196 640 aa23.3■■□□□ 1.32
TSSC4-207ENST00000451491 TAL1P17542 331 aaPredicted RBP23.3■■□□□ 1.32
TSSC4-207ENST00000451491 CHST13Q8NET6 341 aa23.3■■□□□ 1.32
TSSC4-207ENST00000451491 V9GY48 417 aaPredicted RBP23.3■■□□□ 1.32
TSSC4-207ENST00000451491 hCG_1642624A0A1W2PR95 340 aa23.29■■□□□ 1.32
TSSC4-207ENST00000451491 FMNL1O95466 1100 aaPredicted RBP23.29■■□□□ 1.32
TSSC4-207ENST00000451491 ST3GAL1Q11201 340 aa23.29■■□□□ 1.32
TSSC4-207ENST00000451491 USH1GQ495M9 461 aa23.29■■□□□ 1.32
TSSC4-207ENST00000451491 WDR78Q5VTH9 848 aa23.29■■□□□ 1.32
TSSC4-207ENST00000451491 CPLX2Q6PUV4 134 aaKnown RBP23.29■■□□□ 1.32
TSSC4-207ENST00000451491 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.29■■□□□ 1.32
TSSC4-207ENST00000451491 PLEKHH3Q7Z736 793 aa23.29■■□□□ 1.32
TSSC4-207ENST00000451491 PHKBQ93100 1093 aa23.29■■□□□ 1.32
TSSC4-207ENST00000451491 TRERF1Q96PN7 1200 aa23.29■■□□□ 1.32
TSSC4-207ENST00000451491 RNF26Q9BY78 433 aaPredicted RBP23.29■■□□□ 1.32
TSSC4-207ENST00000451491 HOMER2Q9NSB8 354 aa23.29■■□□□ 1.32
TSSC4-207ENST00000451491 RNF146Q9NTX7 359 aa23.29■■□□□ 1.32
TSSC4-207ENST00000451491 FBXO40Q9UH90 709 aa23.29■■□□□ 1.32
TSSC4-207ENST00000451491 PRPF3O43395 683 aaKnown RBP23.28■■□□□ 1.32
TSSC4-207ENST00000451491 GNRH1P01148 92 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms