RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 CHST13Q8NET6 341 aa11.75□□□□□ -0.53
LINC01238-204ENST00000451070 GMCL1Q96IK5 515 aa11.75□□□□□ -0.53
LINC01238-204ENST00000451070 CRBNQ96SW2 442 aa11.75□□□□□ -0.53
LINC01238-204ENST00000451070 TSEN34Q9BSV6 310 aaKnown RBP11.75□□□□□ -0.53
LINC01238-204ENST00000451070 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.75□□□□□ -0.53
LINC01238-204ENST00000451070 FBXO40Q9UH90 709 aa11.75□□□□□ -0.53
LINC01238-204ENST00000451070 ZHX1Q9UKY1 873 aaPredicted RBP11.75□□□□□ -0.53
LINC01238-204ENST00000451070 FAM184BQ9ULE4 1060 aa11.75□□□□□ -0.53
LINC01238-204ENST00000451070 CTDP1Q9Y5B0 961 aaPredicted RBP11.75□□□□□ -0.53
LINC01238-204ENST00000451070 LCTP09848 1927 aa11.75□□□□□ -0.53
LINC01238-204ENST00000451070 ZNF536O15090 1300 aa11.75□□□□□ -0.53
LINC01238-204ENST00000451070 NMT2O60551 498 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 DUSP11O75319 330 aaKnown RBP11.74□□□□□ -0.53
LINC01238-204ENST00000451070 CLTBP09497 229 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 FDX1P10109 184 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 MCCP23508 829 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 STAT2P52630 851 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 ACLYP53396 1101 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 PDE1AP54750 535 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 CNTN2Q02246 1040 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 ACVR2BQ13705 512 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 ARMCX2Q7L311 632 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 ANKRD35Q8N283 1001 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 CHMP4CQ96CF2 233 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 GUCD1Q96NT3 240 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 KATNBL1Q9H079 304 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 ANAPC4Q9UJX5 808 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 LRRC37A2A6NM11 1700 aa11.74□□□□□ -0.53
LINC01238-204ENST00000451070 KIAA0355O15063 1070 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 PLA2G6O60733 806 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 PQBP1O60828 265 aaKnown RBP11.73□□□□□ -0.53
LINC01238-204ENST00000451070 FGRP09769 529 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 CST5P28325 142 aaPredicted RBP11.73□□□□□ -0.53
LINC01238-204ENST00000451070 SLC1A4P43007 532 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 NOVP48745 357 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 EPHB4P54760 987 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 ALX1Q15699 326 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 KCNA10Q16322 511 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 CCDC144BQ3MJ40 725 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 KCTD1Q719H9 257 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 ANKRD33Q7Z3H0 272 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 FAM160B2Q86V87 743 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 CUL9Q8IWT3 2517 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 CCDC144CPQ8IYA2 1237 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 FAM133AQ8N9E0 248 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 CHURC1Q8WUH1 139 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 STAG1Q8WVM7 1258 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 EVI5LQ96CN4 794 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 AGBL1Q96MI9 1066 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 ANP32EQ9BTT0 268 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 ABHD16BQ9H3Z7 469 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 ACAD9Q9H845 621 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 HOMER2Q9NSB8 354 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 STX8Q9UNK0 236 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 UNC80Q8N2C7 3258 aa11.73□□□□□ -0.53
LINC01238-204ENST00000451070 ASTN1O14525 1302 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 A0A0D9SFI3 127 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 MOXD2PA6NHM9 499 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 TSPY2A6NKD2 308 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 CTAGE5O15320 804 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 SNAP25P60880 206 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 FAAP100Q0VG06 881 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 HDAC1Q13547 482 aaPredicted RBP11.72□□□□□ -0.53
LINC01238-204ENST00000451070 RCSD1Q6JBY9 416 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 FAM227BQ96M60 508 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 FAM161BQ96MY7 647 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 TOX2Q96NM4 488 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 UPF3AQ9H1J1 476 aaKnown RBP11.72□□□□□ -0.53
LINC01238-204ENST00000451070 A1CFQ9NQ94 594 aaKnown RBP11.72□□□□□ -0.53
LINC01238-204ENST00000451070 STARD7Q9NQZ5 370 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 HELLSQ9NRZ9 838 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 RNF146Q9NTX7 359 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 ISY1Q9ULR0 285 aaKnown RBP11.72□□□□□ -0.53
LINC01238-204ENST00000451070 CDH23Q9H251 3354 aa11.72□□□□□ -0.53
LINC01238-204ENST00000451070 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.71□□□□□ -0.53
LINC01238-204ENST00000451070 SOWAHBA6NEL2 793 aa11.71□□□□□ -0.53
LINC01238-204ENST00000451070 DLL1O00548 723 aa11.71□□□□□ -0.53
LINC01238-204ENST00000451070 ORC4O43929 436 aa11.71□□□□□ -0.53
LINC01238-204ENST00000451070 RANBP6O60518 1105 aaKnown RBP11.71□□□□□ -0.53
LINC01238-204ENST00000451070 FGAP02671 866 aa11.71□□□□□ -0.53
LINC01238-204ENST00000451070 ASGR1P07306 291 aa11.71□□□□□ -0.53
LINC01238-204ENST00000451070 C6orf222P0C671 652 aaPredicted RBP11.71□□□□□ -0.53
LINC01238-204ENST00000451070 GJA9P57773 515 aa11.71□□□□□ -0.53
LINC01238-204ENST00000451070 IKQ13123 557 aaPredicted RBP11.71□□□□□ -0.53
LINC01238-204ENST00000451070 TKFCQ3LXA3 575 aa11.71□□□□□ -0.53
LINC01238-204ENST00000451070 MUM1L1Q5H9M0 696 aa11.71□□□□□ -0.53
LINC01238-204ENST00000451070 PPP4R3BQ5MIZ7 849 aa11.71□□□□□ -0.53
LINC01238-204ENST00000451070 ZNF589Q86UQ0 364 aaPredicted RBP11.71□□□□□ -0.53
LINC01238-204ENST00000451070 NUP133Q8WUM0 1156 aa11.71□□□□□ -0.53
LINC01238-204ENST00000451070 TRERF1Q96PN7 1200 aa11.71□□□□□ -0.53
LINC01238-204ENST00000451070 PRR12Q9ULL5 1215 aa11.71□□□□□ -0.53
LINC01238-204ENST00000451070 DDX49Q9Y6V7 483 aaKnown RBP11.71□□□□□ -0.53
LINC01238-204ENST00000451070 EYSQ5T1H1 3165 aa11.71□□□□□ -0.53
LINC01238-204ENST00000451070 ELP1O95163 1332 aa11.7□□□□□ -0.54
LINC01238-204ENST00000451070 DCDC2CA8MYV0 355 aa11.7□□□□□ -0.54
LINC01238-204ENST00000451070 ALAS1P13196 640 aa11.7□□□□□ -0.54
LINC01238-204ENST00000451070 RAG1P15918 1043 aa11.7□□□□□ -0.54
LINC01238-204ENST00000451070 CDK7P50613 346 aa11.7□□□□□ -0.54
LINC01238-204ENST00000451070 NKX3-2P78367 333 aa11.7□□□□□ -0.54
LINC01238-204ENST00000451070 SMAD3P84022 425 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms