RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 UPF3BQ9BZI7 483 aaKnown RBP9.78□□□□□ -0.84
LINC01961-201ENST00000449954 HIPK3Q9H422 1215 aa9.78□□□□□ -0.84
LINC01961-201ENST00000449954 SYNRGQ9UMZ2 1314 aa9.78□□□□□ -0.84
LINC01961-201ENST00000449954 SIPA1L1O43166 1804 aa9.77□□□□□ -0.84
LINC01961-201ENST00000449954 PTPRZ1P23471 2315 aaPredicted RBP9.77□□□□□ -0.85
LINC01961-201ENST00000449954 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.77□□□□□ -0.85
LINC01961-201ENST00000449954 ZBBXA8MT70 800 aa9.77□□□□□ -0.85
LINC01961-201ENST00000449954 ARVCFO00192 962 aa9.77□□□□□ -0.85
LINC01961-201ENST00000449954 ALDH1L1O75891 902 aa9.77□□□□□ -0.85
LINC01961-201ENST00000449954 PFKMP08237 780 aa9.77□□□□□ -0.85
LINC01961-201ENST00000449954 VCAM1P19320 739 aa9.77□□□□□ -0.85
LINC01961-201ENST00000449954 CST5P28325 142 aaPredicted RBP9.77□□□□□ -0.85
LINC01961-201ENST00000449954 CYP2C18P33260 490 aa9.77□□□□□ -0.85
LINC01961-201ENST00000449954 GRB10Q13322 594 aa9.77□□□□□ -0.85
LINC01961-201ENST00000449954 PTCRAQ6ISU1 281 aaPredicted RBP9.77□□□□□ -0.85
LINC01961-201ENST00000449954 PCSK9Q8NBP7 692 aaKnown RBP9.77□□□□□ -0.85
LINC01961-201ENST00000449954 KLHDC9Q8NEP7 349 aa9.77□□□□□ -0.85
LINC01961-201ENST00000449954 TRIM34Q9BYJ4 488 aa9.77□□□□□ -0.85
LINC01961-201ENST00000449954 IRX2Q9BZI1 471 aaPredicted RBP9.77□□□□□ -0.85
LINC01961-201ENST00000449954 MROH8Q9H579 483 aa9.77□□□□□ -0.85
LINC01961-201ENST00000449954 CERS4Q9HA82 394 aa9.77□□□□□ -0.85
LINC01961-201ENST00000449954 PRKAG3Q9UGI9 489 aa9.77□□□□□ -0.85
LINC01961-201ENST00000449954 FAM50BQ9Y247 325 aa9.77□□□□□ -0.85
LINC01961-201ENST00000449954 SMCHD1A6NHR9 2005 aa9.77□□□□□ -0.85
LINC01961-201ENST00000449954 KMT2BQ9UMN6 2715 aaPredicted RBP9.76□□□□□ -0.85
LINC01961-201ENST00000449954 NR1I2O75469 434 aa9.76□□□□□ -0.85
LINC01961-201ENST00000449954 IL9P15248 144 aa9.76□□□□□ -0.85
LINC01961-201ENST00000449954 ERCC3P19447 782 aa9.76□□□□□ -0.85
LINC01961-201ENST00000449954 KCNA5P22460 613 aa9.76□□□□□ -0.85
LINC01961-201ENST00000449954 TAP1Q03518 808 aa9.76□□□□□ -0.85
LINC01961-201ENST00000449954 KCNA10Q16322 511 aa9.76□□□□□ -0.85
LINC01961-201ENST00000449954 CCSAPQ6IQ19 270 aaPredicted RBP9.76□□□□□ -0.85
LINC01961-201ENST00000449954 BMP8AQ7Z5Y6 402 aa9.76□□□□□ -0.85
LINC01961-201ENST00000449954 METTL16Q86W50 562 aaKnown RBP9.76□□□□□ -0.85
LINC01961-201ENST00000449954 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.76□□□□□ -0.85
LINC01961-201ENST00000449954 KAZALD1Q96I82 304 aa9.76□□□□□ -0.85
LINC01961-201ENST00000449954 SLC9A7Q96T83 725 aa9.76□□□□□ -0.85
LINC01961-201ENST00000449954 SPATC1LQ9H0A9 340 aa9.76□□□□□ -0.85
LINC01961-201ENST00000449954 KIAA1683Q9H0B3 1180 aa9.76□□□□□ -0.85
LINC01961-201ENST00000449954 BICC1Q9H694 974 aaKnown RBP9.76□□□□□ -0.85
LINC01961-201ENST00000449954 ABCF2Q9UG63 623 aa9.76□□□□□ -0.85
LINC01961-201ENST00000449954 CNPY2Q9Y2B0 182 aa9.76□□□□□ -0.85
LINC01961-201ENST00000449954 KIF28PB7ZC32 967 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 F6X3S4 739 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 LPXNO60711 386 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 GDF11O95390 407 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 CD4P01730 458 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 FCER1AP12319 257 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 GSTO1P78417 241 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 JAG1P78504 1218 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 TCF15Q12870 199 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 RALBP1Q15311 655 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 ZYXQ15942 572 aaKnown RBP9.75□□□□□ -0.85
LINC01961-201ENST00000449954 CRACR2BQ8N4Y2 399 aaPredicted RBP9.75□□□□□ -0.85
LINC01961-201ENST00000449954 MB21D1Q8N884 522 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 KRI1Q8N9T8 703 aaKnown RBP9.75□□□□□ -0.85
LINC01961-201ENST00000449954 PHOSPHO2Q8TCD6 241 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 ANKS1AQ92625 1134 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 TINF2Q9BSI4 451 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 DNAJC18Q9H819 358 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 SPC25Q9HBM1 224 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 DMDP11532 3685 aa9.75□□□□□ -0.85
LINC01961-201ENST00000449954 PKD1L2Q7Z442 2459 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 ASGR1P07306 291 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 LDHCP07864 332 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 ZNF865P0CJ78 1059 aaPredicted RBP9.74□□□□□ -0.85
LINC01961-201ENST00000449954 ID4P47928 161 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 MECOMQ03112 1051 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 ZP2Q05996 745 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 ATP2B3Q16720 1220 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 FOXP4Q8IVH2 680 aaPredicted RBP9.74□□□□□ -0.85
LINC01961-201ENST00000449954 SUGP1Q8IWZ8 645 aaKnown RBP9.74□□□□□ -0.85
LINC01961-201ENST00000449954 SCUBE3Q8IX30 993 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 TSR2Q969E8 191 aaKnown RBP9.74□□□□□ -0.85
LINC01961-201ENST00000449954 VTI1AQ96AJ9 217 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 LENG1Q96BZ8 264 aaPredicted RBP9.74□□□□□ -0.85
LINC01961-201ENST00000449954 PCGF6Q9BYE7 350 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 SEZ6LQ9BYH1 1024 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 PRKD2Q9BZL6 878 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 SRCIN1Q9C0H9 1055 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 RPAP3Q9H6T3 665 aaPredicted RBP9.74□□□□□ -0.85
LINC01961-201ENST00000449954 HOXC10Q9NYD6 342 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 FAM184BQ9ULE4 1060 aa9.74□□□□□ -0.85
LINC01961-201ENST00000449954 DIS3Q9Y2L1 958 aaKnown RBP9.74□□□□□ -0.85
LINC01961-201ENST00000449954 RIF1Q5UIP0 2472 aaKnown RBP9.74□□□□□ -0.85
LINC01961-201ENST00000449954 BAHCC1Q9P281 2608 aa9.73□□□□□ -0.85
LINC01961-201ENST00000449954 FAM186AA6NE01 2351 aa9.73□□□□□ -0.85
LINC01961-201ENST00000449954 EYA2O00167 538 aa9.73□□□□□ -0.85
LINC01961-201ENST00000449954 DUSP11O75319 330 aaKnown RBP9.73□□□□□ -0.85
LINC01961-201ENST00000449954 ACTN1P12814 892 aa9.73□□□□□ -0.85
LINC01961-201ENST00000449954 PHKA1P46020 1223 aa9.73□□□□□ -0.85
LINC01961-201ENST00000449954 GCGRP47871 477 aa9.73□□□□□ -0.85
LINC01961-201ENST00000449954 RASGRF1Q13972 1273 aa9.73□□□□□ -0.85
LINC01961-201ENST00000449954 SHROOM1Q2M3G4 852 aaPredicted RBP9.73□□□□□ -0.85
LINC01961-201ENST00000449954 HERC4Q5GLZ8 1057 aaPredicted RBP9.73□□□□□ -0.85
LINC01961-201ENST00000449954 ATF7IPQ6VMQ6 1270 aa9.73□□□□□ -0.85
LINC01961-201ENST00000449954 ERICH6Q7L0X2 663 aa9.73□□□□□ -0.85
LINC01961-201ENST00000449954 NCAPG2Q86XI2 1143 aa9.73□□□□□ -0.85
LINC01961-201ENST00000449954 ADHFE1Q8IWW8 467 aa9.73□□□□□ -0.85
LINC01961-201ENST00000449954 TEX11Q8IYF3 940 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms