RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 TMEM232C9JQI7 657 aa14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 BAG4O95429 457 aaKnown RBP14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 IKQ13123 557 aaPredicted RBP14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 SYDE2Q5VT97 1194 aa14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 MCTP1Q6DN14 999 aa14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 BTNL9Q6UXG8 535 aa14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 ARMC9Q7Z3E5 817 aa14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 HEATR3Q7Z4Q2 680 aa14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 CCDC148Q8NFR7 591 aa14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 MTMR8Q96EF0 704 aa14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 C12orf42Q96LP6 360 aa14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 ZSCAN16Q9H4T2 348 aaPredicted RBP14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 JMJD4Q9H9V9 463 aa14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 SH3GLB2Q9NR46 395 aa14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 ZHX2Q9Y6X8 837 aa14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 CUL9Q8IWT3 2517 aa14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 CEP290O15078 2479 aa14.65□□□□□ -0.06
HLA-DRB9-201ENST00000449413 KIF28PB7ZC32 967 aa14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 STXBP3O00186 592 aa14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 ZBTB5O15062 677 aa14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 VCAM1P19320 739 aa14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 BACE1P56817 501 aa14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 SREBF2Q12772 1141 aa14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 SPP2Q13103 211 aa14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 SAFBQ15424 915 aaKnown RBP eCLIP14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 CDC37Q16543 378 aaPredicted RBP14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 PPP1R18Q6NYC8 613 aa14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 MOB2Q70IA6 237 aa14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 BRAPQ7Z569 592 aa14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 FAM177A1Q8N128 213 aaPredicted RBP14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 PHF20Q9BVI0 1012 aa14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 ELP3Q9H9T3 547 aa14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 BARHL2Q9NY43 387 aa14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 KCNJ14Q9UNX9 436 aa14.64□□□□□ -0.07
HLA-DRB9-201ENST00000449413 TRIOBPQ9H2D6 2365 aa14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 PNMA6FA0A0J9YX94 578 aa14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 POTEFA5A3E0 1075 aa14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 SPDYE5A6NIY4 337 aa14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 PLA2G6O60733 806 aa14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 KRT2P35908 639 aa14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 HMGCS2P54868 508 aa14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 NAPAP54920 295 aa14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 GNL2Q13823 731 aaKnown RBP14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 FOXD4L6Q3SYB3 417 aaPredicted RBP14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 FOXD4L3Q6VB84 417 aaPredicted RBP14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 FAM160B2Q86V87 743 aa14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 DIS3L2Q8IYB7 885 aaKnown RBP14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 CCDC12Q8WUD4 166 aaPredicted RBP14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 CLMNQ96JQ2 1002 aa14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 VAT1LQ9HCJ6 419 aa14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 BRMS1Q9HCU9 246 aa14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 EMILIN3Q9NT22 766 aa14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 AFG3L2Q9Y4W6 797 aa14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 KIAA0100Q14667 2235 aaKnown RBP14.63□□□□□ -0.07
HLA-DRB9-201ENST00000449413 RANBP2P49792 3224 aaKnown RBP14.62□□□□□ -0.07
HLA-DRB9-201ENST00000449413 C19orf81C9J6K1 198 aa14.62□□□□□ -0.07
HLA-DRB9-201ENST00000449413 NPY5RQ15761 445 aa14.62□□□□□ -0.07
HLA-DRB9-201ENST00000449413 QRICH1Q2TAL8 776 aa14.62□□□□□ -0.07
HLA-DRB9-201ENST00000449413 TYW1BQ6NUM6 668 aa14.62□□□□□ -0.07
HLA-DRB9-201ENST00000449413 ERO1BQ86YB8 467 aa14.62□□□□□ -0.07
HLA-DRB9-201ENST00000449413 CNKSR2Q8WXI2 1034 aa14.62□□□□□ -0.07
HLA-DRB9-201ENST00000449413 CHAMP1Q96JM3 812 aa14.62□□□□□ -0.07
HLA-DRB9-201ENST00000449413 TANGO6Q9C0B7 1094 aa14.62□□□□□ -0.07
HLA-DRB9-201ENST00000449413 FEM1BQ9UK73 627 aa14.62□□□□□ -0.07
HLA-DRB9-201ENST00000449413 PRR12Q9ULL5 1215 aa14.62□□□□□ -0.07
HLA-DRB9-201ENST00000449413 ESYT2A0FGR8 921 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 UNCXA6NJT0 531 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 DDX11L8A8MPP1 907 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 PPP1R11O60927 126 aaPredicted RBP14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 U2AF2P26368 475 aaKnown RBP eCLIP14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 CALML3P27482 149 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 NLRP5P59047 1200 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 DNM1Q05193 864 aaKnown RBP14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 PPATQ06203 517 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 PPIL2Q13356 520 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 NFKBIBQ15653 356 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 SH3D19Q5HYK7 790 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 LDLRAD1Q5T700 205 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 FAM173BQ6P4H8 233 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 DAGLBQ8NCG7 672 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 CHURC1Q8WUH1 139 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 OTUD5Q96G74 571 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 SLF1Q9BQI6 1058 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 RANBP17Q9H2T7 1088 aaKnown RBP14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 FOXP1Q9H334 677 aaPredicted RBP14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 RPAP3Q9H6T3 665 aaPredicted RBP14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 TMOD4Q9NZQ9 345 aa14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.61□□□□□ -0.07
HLA-DRB9-201ENST00000449413 GOLGA6L22H0YM25 854 aa14.6□□□□□ -0.07
HLA-DRB9-201ENST00000449413 ALDH1A1P00352 501 aa14.6□□□□□ -0.07
HLA-DRB9-201ENST00000449413 MCM4P33991 863 aa14.6□□□□□ -0.07
HLA-DRB9-201ENST00000449413 KRT85P78386 507 aa14.6□□□□□ -0.07
HLA-DRB9-201ENST00000449413 NR5A1Q13285 461 aa14.6□□□□□ -0.07
HLA-DRB9-201ENST00000449413 MYSM1Q5VVJ2 828 aa14.6□□□□□ -0.07
HLA-DRB9-201ENST00000449413 NOSTRINQ8IVI9 506 aa14.6□□□□□ -0.07
HLA-DRB9-201ENST00000449413 OXER1Q8TDS5 423 aa14.6□□□□□ -0.07
HLA-DRB9-201ENST00000449413 KIFC2Q96AC6 838 aa14.6□□□□□ -0.07
HLA-DRB9-201ENST00000449413 R3HDMLQ9H3Y0 253 aa14.6□□□□□ -0.07
HLA-DRB9-201ENST00000449413 FBXO28Q9NVF7 368 aa14.6□□□□□ -0.07
HLA-DRB9-201ENST00000449413 PCDHA4Q9UN74 947 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms