RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 CYP21A2P08686 494 aa17.12■□□□□ 0.33
USP39-206ENST00000448971 TOP1P11387 765 aaKnown RBP17.12■□□□□ 0.33
USP39-206ENST00000448971 CYBAP13498 195 aa17.12■□□□□ 0.33
USP39-206ENST00000448971 CNGA1P29973 690 aa17.12■□□□□ 0.33
USP39-206ENST00000448971 ATN1P54259 1190 aaPredicted RBP17.12■□□□□ 0.33
USP39-206ENST00000448971 TRDNQ13061 729 aa17.12■□□□□ 0.33
USP39-206ENST00000448971 RASGRP2Q7LDG7 609 aa17.12■□□□□ 0.33
USP39-206ENST00000448971 RALYLQ86SE5 291 aaKnown RBP17.12■□□□□ 0.33
USP39-206ENST00000448971 KIFC2Q96AC6 838 aa17.12■□□□□ 0.33
USP39-206ENST00000448971 FEM1BQ9UK73 627 aa17.12■□□□□ 0.33
USP39-206ENST00000448971 RBM8AQ9Y5S9 174 aaKnown RBP17.12■□□□□ 0.33
USP39-206ENST00000448971 CDH23Q9H251 3354 aa17.12■□□□□ 0.33
USP39-206ENST00000448971 SMCHD1A6NHR9 2005 aa17.11■□□□□ 0.33
USP39-206ENST00000448971 STRNO43815 780 aa17.11■□□□□ 0.33
USP39-206ENST00000448971 MCCP23508 829 aa17.11■□□□□ 0.33
USP39-206ENST00000448971 STAT2P52630 851 aa17.11■□□□□ 0.33
USP39-206ENST00000448971 NCAPG2Q86XI2 1143 aa17.11■□□□□ 0.33
USP39-206ENST00000448971 GMCL1Q96IK5 515 aa17.11■□□□□ 0.33
USP39-206ENST00000448971 LBHD1Q9BQE6 289 aaPredicted RBP17.11■□□□□ 0.33
USP39-206ENST00000448971 TMEM47Q9BQJ4 181 aa17.11■□□□□ 0.33
USP39-206ENST00000448971 UBAC1Q9BSL1 405 aa17.11■□□□□ 0.33
USP39-206ENST00000448971 MOV10L1Q9BXT6 1211 aaKnown RBP17.11■□□□□ 0.33
USP39-206ENST00000448971 TMEM232C9JQI7 657 aa17.1■□□□□ 0.33
USP39-206ENST00000448971 VWA5AO00534 786 aa17.1■□□□□ 0.33
USP39-206ENST00000448971 COBLO75128 1261 aa17.1■□□□□ 0.33
USP39-206ENST00000448971 ERCC3P19447 782 aa17.1■□□□□ 0.33
USP39-206ENST00000448971 ADORA2AP29274 412 aa17.1■□□□□ 0.33
USP39-206ENST00000448971 NOVP48745 357 aa17.1■□□□□ 0.33
USP39-206ENST00000448971 RTP1P59025 263 aa17.1■□□□□ 0.33
USP39-206ENST00000448971 TMEM132BQ14DG7 1078 aa17.1■□□□□ 0.33
USP39-206ENST00000448971 CCDC178Q5BJE1 867 aa17.1■□□□□ 0.33
USP39-206ENST00000448971 GJC2Q5T442 439 aaPredicted RBP17.1■□□□□ 0.33
USP39-206ENST00000448971 OLFML2BQ68BL8 750 aa17.1■□□□□ 0.33
USP39-206ENST00000448971 KCTD1Q719H9 257 aa17.1■□□□□ 0.33
USP39-206ENST00000448971 PRPF38AQ8NAV1 312 aaKnown RBP17.1■□□□□ 0.33
USP39-206ENST00000448971 DCAF4Q8WV16 495 aa17.1■□□□□ 0.33
USP39-206ENST00000448971 MAP4K1Q92918 833 aa17.1■□□□□ 0.33
USP39-206ENST00000448971 TNKSO95271 1327 aa17.1■□□□□ 0.33
USP39-206ENST00000448971 ZBED4O75132 1171 aa17.09■□□□□ 0.33
USP39-206ENST00000448971 SLC39A5Q6ZMH5 540 aa17.09■□□□□ 0.33
USP39-206ENST00000448971 DPP9Q86TI2 863 aa17.09■□□□□ 0.33
USP39-206ENST00000448971 FAM160B2Q86V87 743 aa17.09■□□□□ 0.33
USP39-206ENST00000448971 ARRDC4Q8NCT1 418 aa17.09■□□□□ 0.33
USP39-206ENST00000448971 SHCBP1Q8NEM2 672 aa17.09■□□□□ 0.33
USP39-206ENST00000448971 TTC14Q96N46 770 aa17.09■□□□□ 0.33
USP39-206ENST00000448971 ZSCAN10Q96SZ4 725 aaPredicted RBP17.09■□□□□ 0.33
USP39-206ENST00000448971 COL25A1Q9BXS0 654 aaPredicted RBP17.09■□□□□ 0.33
USP39-206ENST00000448971 LSG1Q9H089 658 aaKnown RBP17.09■□□□□ 0.33
USP39-206ENST00000448971 KAT14Q9H8E8 782 aa17.09■□□□□ 0.33
USP39-206ENST00000448971 COL11A1P12107 1806 aaPredicted RBP17.09■□□□□ 0.33
USP39-206ENST00000448971 ZNFX1Q9P2E3 1918 aaKnown RBP17.09■□□□□ 0.33
USP39-206ENST00000448971 FRMPD2Q68DX3 1309 aaPredicted RBP17.08■□□□□ 0.32
USP39-206ENST00000448971 SLC4A3P48751 1232 aa17.08■□□□□ 0.32
USP39-206ENST00000448971 SNRNP48Q6IEG0 339 aaKnown RBP17.08■□□□□ 0.32
USP39-206ENST00000448971 RCSD1Q6JBY9 416 aa17.08■□□□□ 0.32
USP39-206ENST00000448971 DGKHQ86XP1 1220 aa17.08■□□□□ 0.32
USP39-206ENST00000448971 NCOA7Q8NI08 942 aa17.08■□□□□ 0.32
USP39-206ENST00000448971 CHURC1Q8WUH1 139 aa17.08■□□□□ 0.32
USP39-206ENST00000448971 TEX13BQ9BXU2 312 aa17.08■□□□□ 0.32
USP39-206ENST00000448971 MROH8Q9H579 483 aa17.08■□□□□ 0.32
USP39-206ENST00000448971 ZSWIM5Q9P217 1185 aa17.08■□□□□ 0.32
USP39-206ENST00000448971 ADAMTS5Q9UNA0 930 aa17.08■□□□□ 0.32
USP39-206ENST00000448971 ZNF236Q9UL36 1845 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 E7EWF7 191 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 SEPT4O43236 478 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 SLC25A27O95847 323 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 COPB2P35606 906 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 STAT3P40763 770 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 SNX17Q15036 470 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 SHHQ15465 462 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 RIOX2Q8IUF8 465 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.07■□□□□ 0.32
USP39-206ENST00000448971 CPXCR1Q8N123 301 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 ENAHQ8N8S7 591 aaPredicted RBP17.07■□□□□ 0.32
USP39-206ENST00000448971 REPS2Q8NFH8 660 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 FAM161BQ96MY7 647 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 PRKAG2Q9UGJ0 569 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 ZNF214Q9UL59 606 aaPredicted RBP17.07■□□□□ 0.32
USP39-206ENST00000448971 TAF6LQ9Y6J9 622 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 LTBP2Q14767 1821 aa17.07■□□□□ 0.32
USP39-206ENST00000448971 ERICH2A1L162 156 aa17.06■□□□□ 0.32
USP39-206ENST00000448971 PDHBP11177 359 aa17.06■□□□□ 0.32
USP39-206ENST00000448971 PRAMEF19Q5SWL8 479 aa17.06■□□□□ 0.32
USP39-206ENST00000448971 IFIT1BQ5T764 474 aaKnown RBP17.06■□□□□ 0.32
USP39-206ENST00000448971 ANO1Q5XXA6 986 aa17.06■□□□□ 0.32
USP39-206ENST00000448971 STOX1Q6ZVD7 989 aa17.06■□□□□ 0.32
USP39-206ENST00000448971 IFNLR1Q8IU57 520 aaPredicted RBP17.06■□□□□ 0.32
USP39-206ENST00000448971 ABRAQ8N0Z2 381 aa17.06■□□□□ 0.32
USP39-206ENST00000448971 PNMA1Q8ND90 353 aa17.06■□□□□ 0.32
USP39-206ENST00000448971 SLC38A10Q9HBR0 1119 aa17.06■□□□□ 0.32
USP39-206ENST00000448971 RAVER2Q9HCJ3 691 aaKnown RBP17.06■□□□□ 0.32
USP39-206ENST00000448971 ATP11BQ9Y2G3 1177 aa17.06■□□□□ 0.32
USP39-206ENST00000448971 TTC28Q96AY4 2481 aa17.06■□□□□ 0.32
USP39-206ENST00000448971 SLC27A2O14975 620 aa17.05■□□□□ 0.32
USP39-206ENST00000448971 FDX1P10109 184 aa17.05■□□□□ 0.32
USP39-206ENST00000448971 SART3Q15020 963 aaKnown RBP17.05■□□□□ 0.32
USP39-206ENST00000448971 C9orf50Q5SZB4 431 aa17.05■□□□□ 0.32
USP39-206ENST00000448971 RNF20Q5VTR2 975 aa17.05■□□□□ 0.32
USP39-206ENST00000448971 C1orf53Q5VUE5 145 aa17.05■□□□□ 0.32
USP39-206ENST00000448971 CYB5R4Q7L1T6 521 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms