RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 MSRAQ9UJ68 235 aa21.54■■□□□ 1.04
CHCHD3-203ENST00000448878 DDX19BQ9UMR2 479 aa21.54■■□□□ 1.04
CHCHD3-203ENST00000448878 APPP05067 770 aa21.53■■□□□ 1.04
CHCHD3-203ENST00000448878 COL9A1P20849 921 aa21.53■■□□□ 1.04
CHCHD3-203ENST00000448878 CYP2C18P33260 490 aa21.53■■□□□ 1.04
CHCHD3-203ENST00000448878 GJA9P57773 515 aa21.53■■□□□ 1.04
CHCHD3-203ENST00000448878 BEX3Q00994 111 aa21.53■■□□□ 1.04
CHCHD3-203ENST00000448878 PSRC1Q6PGN9 363 aaPredicted RBP21.53■■□□□ 1.04
CHCHD3-203ENST00000448878 CCDC144CPQ8IYA2 1237 aa21.53■■□□□ 1.04
CHCHD3-203ENST00000448878 STRBPQ96SI9 672 aaKnown RBP21.53■■□□□ 1.04
CHCHD3-203ENST00000448878 PRDM1O75626 825 aa21.52■■□□□ 1.04
CHCHD3-203ENST00000448878 SBK1Q52WX2 424 aa21.52■■□□□ 1.04
CHCHD3-203ENST00000448878 FAM126BQ8IXS8 530 aa21.52■■□□□ 1.04
CHCHD3-203ENST00000448878 CHST13Q8NET6 341 aa21.52■■□□□ 1.04
CHCHD3-203ENST00000448878 IL27Q8NEV9 243 aa21.52■■□□□ 1.04
CHCHD3-203ENST00000448878 CHMP4CQ96CF2 233 aa21.52■■□□□ 1.04
CHCHD3-203ENST00000448878 FEM1BQ9UK73 627 aa21.52■■□□□ 1.04
CHCHD3-203ENST00000448878 ATP2A1O14983 1001 aa21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 SMARCA5O60264 1052 aaPredicted RBP21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 FGBP02675 491 aa21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 TDO2P48775 406 aa21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 TNFAIP2Q03169 654 aa21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 IKQ13123 557 aaPredicted RBP21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 LRRC47Q8N1G4 583 aaKnown RBP21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 UPF3AQ9H1J1 476 aaKnown RBP21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 MTIF3Q9H2K0 278 aaKnown RBP21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 SLC28A3Q9HAS3 691 aa21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 SLC38A10Q9HBR0 1119 aa21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 ZNF287Q9HBT7 754 aa21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 ZBTB40Q9NUA8 1239 aa21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 THEGQ9P2T0 379 aa21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 MYH7P12883 1935 aa21.51■■□□□ 1.03
CHCHD3-203ENST00000448878 GSG1L2A8MUP6 293 aa21.5■■□□□ 1.03
CHCHD3-203ENST00000448878 CNTN2Q02246 1040 aa21.5■■□□□ 1.03
CHCHD3-203ENST00000448878 RAB30Q15771 203 aa21.5■■□□□ 1.03
CHCHD3-203ENST00000448878 ATXN2LQ8WWM7 1075 aaKnown RBP21.5■■□□□ 1.03
CHCHD3-203ENST00000448878 LRRCC1Q9C099 1032 aa21.5■■□□□ 1.03
CHCHD3-203ENST00000448878 NKX2-4Q9H2Z4 354 aa21.5■■□□□ 1.03
CHCHD3-203ENST00000448878 IL23AQ9NPF7 189 aa21.5■■□□□ 1.03
CHCHD3-203ENST00000448878 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.49■■□□□ 1.03
CHCHD3-203ENST00000448878 AKNAD1Q5T1N1 836 aa21.49■■□□□ 1.03
CHCHD3-203ENST00000448878 CXCL17Q6UXB2 119 aa21.49■■□□□ 1.03
CHCHD3-203ENST00000448878 OTOP2Q7RTS6 562 aa21.49■■□□□ 1.03
CHCHD3-203ENST00000448878 CEP95Q96GE4 821 aa21.49■■□□□ 1.03
CHCHD3-203ENST00000448878 FGD4Q96M96 766 aa21.49■■□□□ 1.03
CHCHD3-203ENST00000448878 HIPK3Q9H422 1215 aa21.49■■□□□ 1.03
CHCHD3-203ENST00000448878 CHMP4BQ9H444 224 aaKnown RBP21.49■■□□□ 1.03
CHCHD3-203ENST00000448878 SPTBN5Q9NRC6 3674 aaKnown RBP21.48■■□□□ 1.03
CHCHD3-203ENST00000448878 TTLL1O95922 423 aa21.48■■□□□ 1.03
CHCHD3-203ENST00000448878 BMP3P12645 472 aa21.48■■□□□ 1.03
CHCHD3-203ENST00000448878 CCL23P55773 120 aa21.48■■□□□ 1.03
CHCHD3-203ENST00000448878 RASIP1Q5U651 963 aa21.48■■□□□ 1.03
CHCHD3-203ENST00000448878 SLFN13Q68D06 897 aa21.48■■□□□ 1.03
CHCHD3-203ENST00000448878 GIMAP6Q6P9H5 292 aa21.48■■□□□ 1.03
CHCHD3-203ENST00000448878 ASB2Q96Q27 587 aa21.48■■□□□ 1.03
CHCHD3-203ENST00000448878 AP5M1Q9H0R1 490 aa21.48■■□□□ 1.03
CHCHD3-203ENST00000448878 ACAD9Q9H845 621 aa21.48■■□□□ 1.03
CHCHD3-203ENST00000448878 CXXC1Q9P0U4 656 aaPredicted RBP21.48■■□□□ 1.03
CHCHD3-203ENST00000448878 TMEM232C9JQI7 657 aa21.47■■□□□ 1.03
CHCHD3-203ENST00000448878 DYNC1LI2O43237 492 aaPredicted RBP21.47■■□□□ 1.03
CHCHD3-203ENST00000448878 TSPY3P0CV98 308 aa21.47■■□□□ 1.03
CHCHD3-203ENST00000448878 TSPY8P0CW00 308 aa21.47■■□□□ 1.03
CHCHD3-203ENST00000448878 OAZ1P54368 228 aa21.47■■□□□ 1.03
CHCHD3-203ENST00000448878 MRPS5P82675 430 aaKnown RBP21.47■■□□□ 1.03
CHCHD3-203ENST00000448878 ITGA7Q13683 1181 aa21.47■■□□□ 1.03
CHCHD3-203ENST00000448878 MICALL1Q8N3F8 863 aa21.47■■□□□ 1.03
CHCHD3-203ENST00000448878 HERVK_113Q902F9 699 aa21.47■■□□□ 1.03
CHCHD3-203ENST00000448878 OSBP2Q969R2 916 aa21.47■■□□□ 1.03
CHCHD3-203ENST00000448878 ECHDC1Q9NTX5 307 aa21.47■■□□□ 1.03
CHCHD3-203ENST00000448878 MTMR4Q9NYA4 1195 aa21.47■■□□□ 1.03
CHCHD3-203ENST00000448878 MYH4Q9Y623 1939 aa21.47■■□□□ 1.03
CHCHD3-203ENST00000448878 MCM3APO60318 1980 aa21.47■■□□□ 1.03
CHCHD3-203ENST00000448878 ZEB2O60315 1214 aa21.46■■□□□ 1.03
CHCHD3-203ENST00000448878 CD4P01730 458 aa21.46■■□□□ 1.03
CHCHD3-203ENST00000448878 ADGRE1Q14246 886 aa21.46■■□□□ 1.03
CHCHD3-203ENST00000448878 TLK2Q86UE8 772 aa21.46■■□□□ 1.03
CHCHD3-203ENST00000448878 ADAMTS19Q8TE59 1207 aa21.46■■□□□ 1.03
CHCHD3-203ENST00000448878 APPBP2Q92624 585 aa21.46■■□□□ 1.03
CHCHD3-203ENST00000448878 MKL1Q969V6 931 aa21.46■■□□□ 1.03
CHCHD3-203ENST00000448878 AGBL1Q96MI9 1066 aa21.46■■□□□ 1.03
CHCHD3-203ENST00000448878 RNF146Q9NTX7 359 aa21.46■■□□□ 1.03
CHCHD3-203ENST00000448878 UMODL1Q5DID0 1318 aa21.46■■□□□ 1.03
CHCHD3-203ENST00000448878 GREB1LQ9C091 1923 aaPredicted RBP21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 IGKV6D-41A0A0C4DH26 115 aa21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 ASB14A6NK59 587 aa21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 ZBBXA8MT70 800 aa21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 CTAGE5O15320 804 aa21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 RNF113AO15541 343 aaKnown RBP21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 GPAA1O43292 621 aa21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 CABYRO75952 493 aa21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 ALAS1P13196 640 aa21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 STAT2P52630 851 aa21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 FSCN1Q16658 493 aaKnown RBP21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 EEPD1Q7L9B9 569 aa21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 KBTBD3Q8NAB2 608 aa21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 GMCL1P1Q8NEA9 526 aa21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 CHURC1Q8WUH1 139 aa21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 TSPYL2Q9H2G4 693 aaPredicted RBP21.45■■□□□ 1.02
CHCHD3-203ENST00000448878 FDX1P10109 184 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms