RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 BRPF3Q9ULD4 1205 aa16.94■□□□□ 0.3
CDK3-202ENST00000448471 MINDY4BA8MYZ0 360 aa16.93■□□□□ 0.3
CDK3-202ENST00000448471 JAK2O60674 1132 aa16.93■□□□□ 0.3
CDK3-202ENST00000448471 KDM4AO75164 1064 aa16.93■□□□□ 0.3
CDK3-202ENST00000448471 CTDNEP1O95476 244 aa16.93■□□□□ 0.3
CDK3-202ENST00000448471 PTPREP23469 700 aa16.93■□□□□ 0.3
CDK3-202ENST00000448471 RTP1P59025 263 aa16.93■□□□□ 0.3
CDK3-202ENST00000448471 ATP2B2Q01814 1243 aa16.93■□□□□ 0.3
CDK3-202ENST00000448471 SART3Q15020 963 aaKnown RBP16.93■□□□□ 0.3
CDK3-202ENST00000448471 FOXD4L5Q5VV16 416 aaPredicted RBP16.93■□□□□ 0.3
CDK3-202ENST00000448471 FOCADQ5VW36 1801 aa16.93■□□□□ 0.3
CDK3-202ENST00000448471 FOXD4L4Q8WXT5 416 aaPredicted RBP16.93■□□□□ 0.3
CDK3-202ENST00000448471 LMBRD1Q9NUN5 540 aa16.93■□□□□ 0.3
CDK3-202ENST00000448471 CDK5RAP2Q96SN8 1893 aa16.92■□□□□ 0.3
CDK3-202ENST00000448471 UNC80Q8N2C7 3258 aa16.92■□□□□ 0.3
CDK3-202ENST00000448471 GOLGA8BA8MQT2 603 aa16.92■□□□□ 0.3
CDK3-202ENST00000448471 USP17L12C9JPN9 530 aa16.92■□□□□ 0.3
CDK3-202ENST00000448471 USP17L21D6R901 530 aa16.92■□□□□ 0.3
CDK3-202ENST00000448471 DNM1LO00429 736 aa16.92■□□□□ 0.3
CDK3-202ENST00000448471 CCT2P78371 535 aaKnown RBP16.92■□□□□ 0.3
CDK3-202ENST00000448471 TMEM67Q5HYA8 995 aa16.92■□□□□ 0.3
CDK3-202ENST00000448471 CATSPERGQ6ZRH7 1159 aa16.92■□□□□ 0.3
CDK3-202ENST00000448471 TMTC2Q8N394 836 aa16.92■□□□□ 0.3
CDK3-202ENST00000448471 ESR2Q92731 530 aa16.92■□□□□ 0.3
CDK3-202ENST00000448471 LY9Q9HBG7 655 aa16.92■□□□□ 0.3
CDK3-202ENST00000448471 INCENPQ9NQS7 918 aa16.92■□□□□ 0.3
CDK3-202ENST00000448471 IVNS1ABPQ9Y6Y0 642 aa16.92■□□□□ 0.3
CDK3-202ENST00000448471 PTPDC1A2A3K4 754 aa16.91■□□□□ 0.3
CDK3-202ENST00000448471 IFIT3O14879 490 aaKnown RBP16.91■□□□□ 0.3
CDK3-202ENST00000448471 ORC4O43929 436 aa16.91■□□□□ 0.3
CDK3-202ENST00000448471 SLC3A2P08195 630 aaKnown RBP16.91■□□□□ 0.3
CDK3-202ENST00000448471 HOXC6P09630 235 aa16.91■□□□□ 0.3
CDK3-202ENST00000448471 CYP2C19P33261 490 aa16.91■□□□□ 0.3
CDK3-202ENST00000448471 RCAN1P53805 252 aa16.91■□□□□ 0.3
CDK3-202ENST00000448471 USP14P54578 494 aa16.91■□□□□ 0.3
CDK3-202ENST00000448471 GRB14Q14449 540 aa16.91■□□□□ 0.3
CDK3-202ENST00000448471 GSE1Q14687 1217 aa16.91■□□□□ 0.3
CDK3-202ENST00000448471 APOA5Q6Q788 366 aa16.91■□□□□ 0.3
CDK3-202ENST00000448471 FAM184AQ8NB25 1140 aa16.91■□□□□ 0.3
CDK3-202ENST00000448471 RGS22Q8NE09 1264 aa16.91■□□□□ 0.3
CDK3-202ENST00000448471 NPLOC4Q8TAT6 608 aa16.91■□□□□ 0.3
CDK3-202ENST00000448471 BTBD7Q9P203 1132 aa16.91■□□□□ 0.3
CDK3-202ENST00000448471 NAP1L2Q9ULW6 460 aaPredicted RBP16.91■□□□□ 0.3
CDK3-202ENST00000448471 ATP11BQ9Y2G3 1177 aa16.91■□□□□ 0.3
CDK3-202ENST00000448471 NID2Q14112 1375 aa16.9■□□□□ 0.3
CDK3-202ENST00000448471 VPS37CA5D8V6 355 aaPredicted RBP16.9■□□□□ 0.3
CDK3-202ENST00000448471 VCAM1P19320 739 aa16.9■□□□□ 0.3
CDK3-202ENST00000448471 KLHL40Q2TBA0 621 aa16.9■□□□□ 0.3
CDK3-202ENST00000448471 TATDN1Q6P1N9 297 aa16.9■□□□□ 0.3
CDK3-202ENST00000448471 CDX2Q99626 313 aaPredicted RBP16.9■□□□□ 0.3
CDK3-202ENST00000448471 NCOA5Q9HCD5 579 aaKnown RBP16.9■□□□□ 0.3
CDK3-202ENST00000448471 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDK3-202ENST00000448471 BAZ2AQ9UIF9 1905 aaKnown RBP16.9■□□□□ 0.3
CDK3-202ENST00000448471 ERICH2A1L162 156 aa16.89■□□□□ 0.3
CDK3-202ENST00000448471 GJC2Q5T442 439 aaPredicted RBP16.89■□□□□ 0.3
CDK3-202ENST00000448471 LBX2Q6XYB7 198 aa16.89■□□□□ 0.3
CDK3-202ENST00000448471 TMEM87AQ8NBN3 555 aa16.89■□□□□ 0.3
CDK3-202ENST00000448471 TRPV1Q8NER1 839 aa16.89■□□□□ 0.3
CDK3-202ENST00000448471 KIAA1683Q9H0B3 1180 aa16.89■□□□□ 0.3
CDK3-202ENST00000448471 TOMM22Q9NS69 142 aa16.89■□□□□ 0.3
CDK3-202ENST00000448471 LTBP2Q14767 1821 aa16.89■□□□□ 0.29
CDK3-202ENST00000448471 SPDYE16A6NNV3 312 aaPredicted RBP16.89■□□□□ 0.29
CDK3-202ENST00000448471 ZBTB43O43298 467 aa16.89■□□□□ 0.29
CDK3-202ENST00000448471 CYBAP13498 195 aa16.89■□□□□ 0.29
CDK3-202ENST00000448471 USP5P45974 858 aa16.89■□□□□ 0.29
CDK3-202ENST00000448471 SHHQ15465 462 aa16.89■□□□□ 0.29
CDK3-202ENST00000448471 RRP12Q5JTH9 1297 aaKnown RBP16.89■□□□□ 0.29
CDK3-202ENST00000448471 ACER1Q8TDN7 264 aa16.89■□□□□ 0.29
CDK3-202ENST00000448471 CYP2D7A0A087X1C5 515 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 CCDC69A6NI79 296 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 PRPF40AO75400 957 aaKnown RBP16.88■□□□□ 0.29
CDK3-202ENST00000448471 CDKL5O76039 1030 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 METAP2P50579 478 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDK3-202ENST00000448471 PDE4BQ07343 736 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 WTAPQ15007 396 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 C9orf50Q5SZB4 431 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 C12orf60Q5U649 245 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 SYNE3Q6ZMZ3 975 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 NFXL1Q6ZNB6 911 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 AMOTL1Q8IY63 956 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 MAFAQ8NHW3 353 aaPredicted RBP16.88■□□□□ 0.29
CDK3-202ENST00000448471 DDX11Q96FC9 970 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 UBAC1Q9BSL1 405 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 PRDM5Q9NQX1 630 aaPredicted RBP16.88■□□□□ 0.29
CDK3-202ENST00000448471 MCM9Q9NXL9 1143 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 SERPINB13Q9UIV8 391 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 SLC12A7Q9Y666 1083 aa16.88■□□□□ 0.29
CDK3-202ENST00000448471 ROBO3Q96MS0 1386 aa16.87■□□□□ 0.29
CDK3-202ENST00000448471 KBTBD13C9JR72 458 aa16.87■□□□□ 0.29
CDK3-202ENST00000448471 CPLX1O14810 134 aa16.87■□□□□ 0.29
CDK3-202ENST00000448471 DTNBO60941 627 aa16.87■□□□□ 0.29
CDK3-202ENST00000448471 IGHA2P01877 340 aa16.87■□□□□ 0.29
CDK3-202ENST00000448471 SEC23AQ15436 765 aa16.87■□□□□ 0.29
CDK3-202ENST00000448471 ABCB5Q2M3G0 1257 aa16.87■□□□□ 0.29
CDK3-202ENST00000448471 CERKLQ49MI3 558 aaPredicted RBP16.87■□□□□ 0.29
CDK3-202ENST00000448471 CPLX2Q6PUV4 134 aaKnown RBP16.87■□□□□ 0.29
CDK3-202ENST00000448471 SLC39A5Q6ZMH5 540 aa16.87■□□□□ 0.29
CDK3-202ENST00000448471 DPP9Q86TI2 863 aa16.87■□□□□ 0.29
CDK3-202ENST00000448471 ARRDC4Q8NCT1 418 aa16.87■□□□□ 0.29
CDK3-202ENST00000448471 EHD4Q9H223 541 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms