RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 TRPA1O75762 1119 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 DHX58Q96C10 678 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 RRP36Q96EU6 259 aaKnown RBP10.14□□□□□ -0.79
SMC6-207ENST00000448223 FAM167BQ9BTA0 163 aa10.14□□□□□ -0.79
SMC6-207ENST00000448223 KDM1AO60341 852 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 USP5P45974 858 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 CTDSPL2Q05D32 466 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 MYO1EQ12965 1108 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 SLC44A4Q53GD3 710 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 MFSD4BQ5TF39 518 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 SRLQ86TD4 932 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 PRPF38AQ8NAV1 312 aaKnown RBP10.13□□□□□ -0.79
SMC6-207ENST00000448223 OSBP2Q969R2 916 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 KAZALD1Q96I82 304 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 HINFPQ9BQA5 517 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 STAT6P42226 847 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 CCDC152Q4G0S7 254 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 ANO1Q5XXA6 986 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 PDZD8Q8NEN9 1154 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 MIS12Q9H081 205 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 ANLNQ9NQW6 1124 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 TMOD3Q9NYL9 352 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 SLC4A7Q9Y6M7 1214 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 PABPN1LA6NDY0 278 aaKnown RBP10.13□□□□□ -0.79
SMC6-207ENST00000448223 M0R2C6 588 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 GCFC2P16383 781 aaKnown RBP10.13□□□□□ -0.79
SMC6-207ENST00000448223 PLIN2Q99541 437 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 PRDM4Q9UKN5 801 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 PFKFB1P16118 471 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 STXBP4Q6ZWJ1 553 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 ZC3H18Q86VM9 953 aaKnown RBP10.13□□□□□ -0.79
SMC6-207ENST00000448223 GRAMD1CQ8IYS0 662 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 KIAA1468Q9P260 1216 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 SEC63Q9UGP8 760 aaKnown RBP10.13□□□□□ -0.79
SMC6-207ENST00000448223 SSX2IPQ9Y2D8 614 aa10.13□□□□□ -0.79
SMC6-207ENST00000448223 PSDA5PKW4 1024 aaPredicted RBP10.12□□□□□ -0.79
SMC6-207ENST00000448223 PDHA1P08559 390 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 GJC1P36383 396 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 CCT6AP40227 531 aaKnown RBP10.12□□□□□ -0.79
SMC6-207ENST00000448223 ANKRD20A4Q4UJ75 823 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 ANKRD20A8PQ5CZ79 823 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 ANKRD20A2Q5SQ80 823 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 ANKRD20A1Q5TYW2 823 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 MYSM1Q5VVJ2 828 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 HS2ST1Q7LGA3 356 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 SRGAP1Q7Z6B7 1085 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 TBC1D1Q86TI0 1168 aaPredicted RBP10.12□□□□□ -0.79
SMC6-207ENST00000448223 TRIML2Q8N7C3 387 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 PSMB7Q99436 277 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 CSRNP2Q9H175 543 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 DONSONQ9NYP3 566 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 MCF2LO15068 1137 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 S100BP04271 92 aaPredicted RBP10.12□□□□□ -0.79
SMC6-207ENST00000448223 MTX1Q13505 466 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 PIP4K2CQ8TBX8 421 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 ANGPTL2Q9UKU9 493 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 MAST3O60307 1309 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 PFKFB2O60825 505 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 ACRBPQ8NEB7 543 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 DYDC2Q96IM9 177 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 HAUS7Q99871 368 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 TXLNGQ9NUQ3 528 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 DKC1O60832 514 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMC6-207ENST00000448223 ATL3Q6DD88 541 aa10.12□□□□□ -0.79
SMC6-207ENST00000448223 INTS9Q9NV88 658 aaKnown RBP10.12□□□□□ -0.79
SMC6-207ENST00000448223 ZSCAN20P17040 1043 aaPredicted RBP10.11□□□□□ -0.79
SMC6-207ENST00000448223 NOP14P78316 857 aaKnown RBP10.11□□□□□ -0.79
SMC6-207ENST00000448223 RNASELQ05823 741 aaKnown RBP10.11□□□□□ -0.79
SMC6-207ENST00000448223 KRT40Q6A162 431 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 PLA2G4DQ86XP0 818 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 OLFM3Q96PB7 478 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 SLF1Q9BQI6 1058 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 FANCLQ9NW38 375 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 DENND2AQ9ULE3 1009 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 POLR2DO15514 142 aaKnown RBP10.11□□□□□ -0.79
SMC6-207ENST00000448223 ECM2O94769 699 aaPredicted RBP10.11□□□□□ -0.79
SMC6-207ENST00000448223 ARHGEF25Q86VW2 580 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 MAGEB6Q8N7X4 407 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 PUS7LQ9H0K6 701 aaKnown RBP10.11□□□□□ -0.79
SMC6-207ENST00000448223 RAB17Q9H0T7 212 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 PPP2R2CQ9Y2T4 447 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 PARP9Q8IXQ6 854 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 OSBPL1AQ9BXW6 950 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 ARMT1Q9H993 441 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 TRIM66O15016 1216 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 PHKG2P15735 406 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 KRT9P35527 623 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 OCA2Q04671 838 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 WDR78Q5VTH9 848 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 ZNF449Q6P9G9 518 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 WDR75Q8IWA0 830 aaKnown RBP10.11□□□□□ -0.79
SMC6-207ENST00000448223 PLBD2Q8NHP8 589 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 ZCRB1Q8TBF4 217 aaKnown RBP10.11□□□□□ -0.79
SMC6-207ENST00000448223 CABP5Q9NP86 173 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 COPRSQ9NQ92 184 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 MORC2Q9Y6X9 1032 aaPredicted RBP10.11□□□□□ -0.79
SMC6-207ENST00000448223 PLEKHG1Q9ULL1 1385 aa10.11□□□□□ -0.79
SMC6-207ENST00000448223 CCDC169A6NNP5 214 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 TPD52L2O43399 206 aaKnown RBP10.1□□□□□ -0.79
SMC6-207ENST00000448223 CCDC14Q49A88 953 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms