RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 NONOQ15233 471 aaKnown RBP eCLIP18.39■□□□□ 0.53
OTUB1-204ENST00000447683 ZNF713Q8N859 430 aaPredicted RBP18.39■□□□□ 0.53
OTUB1-204ENST00000447683 CTAGE1Q96RT6 745 aa18.39■□□□□ 0.53
OTUB1-204ENST00000447683 PIGSQ96S52 555 aa18.39■□□□□ 0.53
OTUB1-204ENST00000447683 RWDD2AQ9UIY3 292 aa18.39■□□□□ 0.53
OTUB1-204ENST00000447683 TTF2Q9UNY4 1162 aaKnown RBP18.39■□□□□ 0.53
OTUB1-204ENST00000447683 EP400Q96L91 3159 aa18.39■□□□□ 0.53
OTUB1-204ENST00000447683 RPN1P04843 607 aaKnown RBP18.39■□□□□ 0.53
OTUB1-204ENST00000447683 SNHG28P0DPA3 235 aa18.39■□□□□ 0.53
OTUB1-204ENST00000447683 PBX1P40424 430 aa18.39■□□□□ 0.53
OTUB1-204ENST00000447683 RRAGBQ5VZM2 374 aa18.39■□□□□ 0.53
OTUB1-204ENST00000447683 HOMER1Q86YM7 354 aa18.39■□□□□ 0.53
OTUB1-204ENST00000447683 SWAP70Q9UH65 585 aa18.39■□□□□ 0.53
OTUB1-204ENST00000447683 CTNND2Q9UQB3 1225 aa18.39■□□□□ 0.53
OTUB1-204ENST00000447683 STX10O60499 249 aa18.38■□□□□ 0.53
OTUB1-204ENST00000447683 MYL1P05976 194 aa18.38■□□□□ 0.53
OTUB1-204ENST00000447683 AKR1B1P15121 316 aa18.38■□□□□ 0.53
OTUB1-204ENST00000447683 PDE6BP35913 854 aa18.38■□□□□ 0.53
OTUB1-204ENST00000447683 ASPRV1Q53RT3 343 aa18.38■□□□□ 0.53
OTUB1-204ENST00000447683 HHIPL2Q6UWX4 724 aa18.38■□□□□ 0.53
OTUB1-204ENST00000447683 DPP8Q6V1X1 898 aaPredicted RBP18.38■□□□□ 0.53
OTUB1-204ENST00000447683 AK8Q96MA6 479 aa18.38■□□□□ 0.53
OTUB1-204ENST00000447683 F8W031 263 aaPredicted RBP18.38■□□□□ 0.53
OTUB1-204ENST00000447683 TEX33O43247 280 aa18.38■□□□□ 0.53
OTUB1-204ENST00000447683 NCBP1Q09161 790 aaKnown RBP18.38■□□□□ 0.53
OTUB1-204ENST00000447683 SEMA3FQ13275 785 aa18.38■□□□□ 0.53
OTUB1-204ENST00000447683 ORC2Q13416 577 aaPredicted RBP18.38■□□□□ 0.53
OTUB1-204ENST00000447683 SOGA3Q5TF21 947 aa18.38■□□□□ 0.53
OTUB1-204ENST00000447683 REXO1L1PQ8IX06 675 aa18.38■□□□□ 0.53
OTUB1-204ENST00000447683 BAG1Q99933 345 aaPredicted RBP18.38■□□□□ 0.53
OTUB1-204ENST00000447683 USP40Q9NVE5 1235 aa18.38■□□□□ 0.53
OTUB1-204ENST00000447683 MYH4Q9Y623 1939 aa18.37■□□□□ 0.53
OTUB1-204ENST00000447683 UBA7P41226 1012 aa18.37■□□□□ 0.53
OTUB1-204ENST00000447683 NEK8Q86SG6 692 aa18.37■□□□□ 0.53
OTUB1-204ENST00000447683 MASTLQ96GX5 879 aa18.37■□□□□ 0.53
OTUB1-204ENST00000447683 UBA5Q9GZZ9 404 aa18.37■□□□□ 0.53
OTUB1-204ENST00000447683 PRDM10Q9NQV6 1147 aa18.37■□□□□ 0.53
OTUB1-204ENST00000447683 KBTBD4Q9NVX7 518 aa18.37■□□□□ 0.53
OTUB1-204ENST00000447683 SERPINB13Q9UIV8 391 aa18.37■□□□□ 0.53
OTUB1-204ENST00000447683 PP2D1A8MPX8 630 aa18.37■□□□□ 0.53
OTUB1-204ENST00000447683 OR52Z1P0C646 297 aa18.37■□□□□ 0.53
OTUB1-204ENST00000447683 PAK1Q13153 545 aa18.37■□□□□ 0.53
OTUB1-204ENST00000447683 KCNB1Q14721 858 aa18.37■□□□□ 0.53
OTUB1-204ENST00000447683 DOK7Q18PE1 504 aa18.37■□□□□ 0.53
OTUB1-204ENST00000447683 VAT1LQ9HCJ6 419 aa18.37■□□□□ 0.53
OTUB1-204ENST00000447683 LIMA1Q9UHB6 759 aaKnown RBP18.37■□□□□ 0.53
OTUB1-204ENST00000447683 LRRC10BA6NIK2 292 aa18.36■□□□□ 0.53
OTUB1-204ENST00000447683 ADKP55263 362 aaKnown RBP18.36■□□□□ 0.53
OTUB1-204ENST00000447683 CDC42EP5Q6NZY7 148 aa18.36■□□□□ 0.53
OTUB1-204ENST00000447683 FLAD1Q8NFF5 587 aa18.36■□□□□ 0.53
OTUB1-204ENST00000447683 MXD3Q9BW11 206 aa18.36■□□□□ 0.53
OTUB1-204ENST00000447683 CUEDC2Q9H467 287 aa18.36■□□□□ 0.53
OTUB1-204ENST00000447683 L2HGDHQ9H9P8 463 aa18.36■□□□□ 0.53
OTUB1-204ENST00000447683 ZSCAN12O43309 604 aa18.35■□□□□ 0.53
OTUB1-204ENST00000447683 ETF1P62495 437 aaKnown RBP18.35■□□□□ 0.53
OTUB1-204ENST00000447683 FILIP1LQ4L180 1135 aa18.35■□□□□ 0.53
OTUB1-204ENST00000447683 APOBEC3HQ6NTF7 200 aaKnown RBP18.35■□□□□ 0.53
OTUB1-204ENST00000447683 SYT10Q6XYQ8 523 aa18.35■□□□□ 0.53
OTUB1-204ENST00000447683 MAGEF1Q9HAY2 307 aa18.35■□□□□ 0.53
OTUB1-204ENST00000447683 KLRC4O43908 158 aa18.35■□□□□ 0.53
OTUB1-204ENST00000447683 CCNT1O60563 726 aaKnown RBP18.35■□□□□ 0.53
OTUB1-204ENST00000447683 TTLL1O95922 423 aa18.35■□□□□ 0.53
OTUB1-204ENST00000447683 SHMT1P34896 483 aa18.35■□□□□ 0.53
OTUB1-204ENST00000447683 LETM2Q2VYF4 491 aa18.35■□□□□ 0.53
OTUB1-204ENST00000447683 TRIM65Q6PJ69 517 aa18.35■□□□□ 0.53
OTUB1-204ENST00000447683 REXO1Q8N1G1 1221 aaKnown RBP18.35■□□□□ 0.53
OTUB1-204ENST00000447683 LRRC47Q8N1G4 583 aaKnown RBP18.35■□□□□ 0.53
OTUB1-204ENST00000447683 NELFBQ8WX92 580 aa18.35■□□□□ 0.53
OTUB1-204ENST00000447683 TEKT1Q969V4 418 aa18.35■□□□□ 0.53
OTUB1-204ENST00000447683 ZFP91Q96JP5 570 aaPredicted RBP18.35■□□□□ 0.53
OTUB1-204ENST00000447683 PANX2Q96RD6 677 aa18.35■□□□□ 0.53
OTUB1-204ENST00000447683 FRMPD2Q68DX3 1309 aaPredicted RBP18.35■□□□□ 0.53
OTUB1-204ENST00000447683 MMP10P09238 476 aa18.34■□□□□ 0.53
OTUB1-204ENST00000447683 PRCPP42785 496 aa18.34■□□□□ 0.53
OTUB1-204ENST00000447683 SCNN1DP51172 638 aa18.34■□□□□ 0.53
OTUB1-204ENST00000447683 SPAG1Q07617 926 aa18.34■□□□□ 0.53
OTUB1-204ENST00000447683 GDAQ9Y2T3 454 aa18.34■□□□□ 0.53
OTUB1-204ENST00000447683 PPP2R2CQ9Y2T4 447 aa18.34■□□□□ 0.53
OTUB1-204ENST00000447683 PARP3Q9Y6F1 533 aa18.34■□□□□ 0.53
OTUB1-204ENST00000447683 ZNF646O15015 1829 aaPredicted RBP18.34■□□□□ 0.53
OTUB1-204ENST00000447683 AKR1B15C9JRZ8 316 aaPredicted RBP18.34■□□□□ 0.53
OTUB1-204ENST00000447683 PODNQ7Z5L7 613 aa18.34■□□□□ 0.53
OTUB1-204ENST00000447683 ADSSL1Q8N142 457 aa18.34■□□□□ 0.53
OTUB1-204ENST00000447683 TBCKQ8TEA7 893 aa18.34■□□□□ 0.53
OTUB1-204ENST00000447683 LRRC15Q8TF66 581 aa18.34■□□□□ 0.53
OTUB1-204ENST00000447683 ITIH6Q6UXX5 1313 aa18.34■□□□□ 0.53
OTUB1-204ENST00000447683 PHLPP2Q6ZVD8 1323 aa18.34■□□□□ 0.53
OTUB1-204ENST00000447683 SIPA1L1O43166 1804 aa18.34■□□□□ 0.53
OTUB1-204ENST00000447683 RHOBTB3O94955 611 aa18.33■□□□□ 0.53
OTUB1-204ENST00000447683 ZNF543Q08ER8 600 aa18.33■□□□□ 0.53
OTUB1-204ENST00000447683 KRT31Q15323 416 aa18.33■□□□□ 0.53
OTUB1-204ENST00000447683 CABP7Q86V35 215 aa18.33■□□□□ 0.53
OTUB1-204ENST00000447683 IGSF22Q8N9C0 903 aa18.33■□□□□ 0.53
OTUB1-204ENST00000447683 RASSF8Q8NHQ8 419 aa18.33■□□□□ 0.53
OTUB1-204ENST00000447683 TMX4Q9H1E5 349 aaPredicted RBP18.33■□□□□ 0.53
OTUB1-204ENST00000447683 EHD4Q9H223 541 aa18.33■□□□□ 0.53
OTUB1-204ENST00000447683 BIN2Q9UBW5 565 aaPredicted RBP18.33■□□□□ 0.53
OTUB1-204ENST00000447683 ZNF215Q9UL58 517 aaPredicted RBP18.33■□□□□ 0.53
OTUB1-204ENST00000447683 KMT5BQ4FZB7 885 aa18.33■□□□□ 0.52
OTUB1-204ENST00000447683 CCDC93Q567U6 631 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms