RNA–Protein interactions for RNA: ENST00000447456.1

CCDC18-205, Transcript of coiled-coil domain containing 18, humanhuman

TSL 1 (best)

Gene CCDC18, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-205ENST00000447456 V9GY48 417 aaPredicted RBP10.67□□□□□ -0.7
CCDC18-205ENST00000447456 BAZ2BQ9UIF8 2168 aaKnown RBP10.66□□□□□ -0.7
CCDC18-205ENST00000447456 CNTNAP5Q8WYK1 1306 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 SPDYE16A6NNV3 312 aaPredicted RBP10.66□□□□□ -0.7
CCDC18-205ENST00000447456 AOC2O75106 756 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 SCG2P13521 617 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 PDIA4P13667 645 aaKnown RBP10.66□□□□□ -0.7
CCDC18-205ENST00000447456 COPB2P35606 906 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 VEGFBP49765 207 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 FUT2Q10981 343 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 TRIM29Q14134 588 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 TAF1CQ15572 869 aaPredicted RBP10.66□□□□□ -0.7
CCDC18-205ENST00000447456 CDC37Q16543 378 aaPredicted RBP10.66□□□□□ -0.7
CCDC18-205ENST00000447456 NBPF11Q86T75 865 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 FBXO11Q86XK2 927 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 HOMER1Q86YM7 354 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 CMTR1Q8N1G2 835 aaKnown RBP10.66□□□□□ -0.7
CCDC18-205ENST00000447456 ATG4CQ96DT6 458 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 MTMR8Q96EF0 704 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 P2RX7Q99572 595 aaKnown RBP10.66□□□□□ -0.7
CCDC18-205ENST00000447456 PTPN18Q99952 460 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 AMNQ9BXJ7 453 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 RANBP17Q9H2T7 1088 aaKnown RBP10.66□□□□□ -0.7
CCDC18-205ENST00000447456 ZFYVE28Q9HCC9 887 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 CWC22Q9HCG8 908 aaKnown RBP10.66□□□□□ -0.7
CCDC18-205ENST00000447456 ADAMTS5Q9UNA0 930 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 RABGAP1Q9Y3P9 1069 aa10.66□□□□□ -0.7
CCDC18-205ENST00000447456 IGF2BP3O00425 579 aaKnown RBP eCLIP10.65□□□□□ -0.7
CCDC18-205ENST00000447456 CYTH3O43739 400 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 CTDNEP1O95476 244 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 ICAM1P05362 532 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 CCNA1P78396 465 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 PFKFB3Q16875 520 aaPredicted RBP10.65□□□□□ -0.7
CCDC18-205ENST00000447456 TKFCQ3LXA3 575 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 CCDC174Q6PII3 467 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 HEATR3Q7Z4Q2 680 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 TEX2Q8IWB9 1127 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 FAM43AQ8N2R8 423 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 CCDC148Q8NFR7 591 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 SMARCC2Q8TAQ2 1214 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 PIBF1Q8WXW3 757 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 DDX11Q96FC9 970 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 PIGSQ96S52 555 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 TEX13BQ9BXU2 312 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 GLT8D2Q9H1C3 349 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 CPVLQ9H3G5 476 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 SH3GLB2Q9NR46 395 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 CCPG1Q9ULG6 757 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 PCDHA1Q9Y5I3 950 aa10.65□□□□□ -0.7
CCDC18-205ENST00000447456 CEP350Q5VT06 3117 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 ATP2A1O14983 1001 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 CA12O43570 354 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 JAK2O60674 1132 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 SLC25A27O95847 323 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 CALML3P27482 149 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 GJB2P29033 226 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 HTRA3P83110 453 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 ST3GAL1Q11201 340 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 PLS1Q14651 629 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 QRICH1Q2TAL8 776 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 PPP1R18Q6NYC8 613 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 CCAR1Q8IX12 1150 aaKnown RBP10.64□□□□□ -0.71
CCDC18-205ENST00000447456 RGS22Q8NE09 1264 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 GPRC5AQ8NFJ5 357 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 IPO9Q96P70 1041 aaKnown RBP10.64□□□□□ -0.71
CCDC18-205ENST00000447456 ALG1Q9BT22 464 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 BEGAINQ9BUH8 593 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 BARHL2Q9NY43 387 aa10.64□□□□□ -0.71
CCDC18-205ENST00000447456 MRPL11Q9Y3B7 192 aaKnown RBP10.64□□□□□ -0.71
CCDC18-205ENST00000447456 ABCB11O95342 1321 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 MYH6P13533 1939 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 hCG_1642624A0A1W2PR95 340 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 H3BQV1 296 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 CYP2C8P10632 490 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 STAT3P40763 770 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 NAPAP54920 295 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 MAP2K1Q02750 393 aaPredicted RBP10.63□□□□□ -0.71
CCDC18-205ENST00000447456 TMEM132BQ14DG7 1078 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 SAFBQ15424 915 aaKnown RBP eCLIP10.63□□□□□ -0.71
CCDC18-205ENST00000447456 SLC35G1Q2M3R5 365 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 IFFO2Q5TF58 517 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 SNRNP48Q6IEG0 339 aaKnown RBP10.63□□□□□ -0.71
CCDC18-205ENST00000447456 GALNT17Q6IS24 598 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 CPXCR1Q8N123 301 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 BICD2Q8TD16 824 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 C8orf76Q96K31 380 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 PAGR1Q9BTK6 254 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 SPATC1LQ9H0A9 340 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 BRMS1Q9HCU9 246 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 FBXO40Q9UH90 709 aa10.63□□□□□ -0.71
CCDC18-205ENST00000447456 TLR2O60603 784 aa10.62□□□□□ -0.71
CCDC18-205ENST00000447456 PPFIA3O75145 1194 aa10.62□□□□□ -0.71
CCDC18-205ENST00000447456 GNA11P29992 359 aa10.62□□□□□ -0.71
CCDC18-205ENST00000447456 MRPL12P52815 198 aaKnown RBP10.62□□□□□ -0.71
CCDC18-205ENST00000447456 SNAP25P60880 206 aa10.62□□□□□ -0.71
CCDC18-205ENST00000447456 ERVK-9P63128 1117 aa10.62□□□□□ -0.71
CCDC18-205ENST00000447456 ERVK-24P63145 666 aa10.62□□□□□ -0.71
CCDC18-205ENST00000447456 PKN1Q16512 942 aa10.62□□□□□ -0.71
CCDC18-205ENST00000447456 FAM110CQ1W6H9 321 aa10.62□□□□□ -0.71
CCDC18-205ENST00000447456 USH1GQ495M9 461 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms