RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 TARSL2A2RTX5 802 aaKnown RBP21.4■■□□□ 1.02
SDCBP-204ENST00000447182 LRRIQ3A6PVS8 624 aaPredicted RBP21.4■■□□□ 1.02
SDCBP-204ENST00000447182 HSPA2P54652 639 aa21.4■■□□□ 1.02
SDCBP-204ENST00000447182 CCDC122Q5T0U0 273 aa21.4■■□□□ 1.02
SDCBP-204ENST00000447182 LEKR1Q6ZMV7 388 aa21.4■■□□□ 1.02
SDCBP-204ENST00000447182 DAGLBQ8NCG7 672 aa21.4■■□□□ 1.02
SDCBP-204ENST00000447182 DHTKD1Q96HY7 919 aaPredicted RBP21.4■■□□□ 1.02
SDCBP-204ENST00000447182 NUP58Q9BVL2 599 aa21.4■■□□□ 1.02
SDCBP-204ENST00000447182 MAGEC2Q9UBF1 373 aaPredicted RBP21.4■■□□□ 1.02
SDCBP-204ENST00000447182 ZNF652Q9Y2D9 606 aa21.4■■□□□ 1.02
SDCBP-204ENST00000447182 LOC102724428A0A0B4J2F2 783 aa21.4■■□□□ 1.02
SDCBP-204ENST00000447182 TSPY2A6NKD2 308 aa21.4■■□□□ 1.02
SDCBP-204ENST00000447182 LAD1O00515 517 aa21.4■■□□□ 1.02
SDCBP-204ENST00000447182 IVLP07476 585 aa21.4■■□□□ 1.02
SDCBP-204ENST00000447182 AARSP49588 968 aaKnown RBP eCLIP21.4■■□□□ 1.02
SDCBP-204ENST00000447182 SIK1P57059 783 aa21.4■■□□□ 1.02
SDCBP-204ENST00000447182 GALNT17Q6IS24 598 aa21.4■■□□□ 1.02
SDCBP-204ENST00000447182 TRIM47Q96LD4 638 aa21.4■■□□□ 1.02
SDCBP-204ENST00000447182 FEZ2Q9UHY8 353 aaPredicted RBP21.4■■□□□ 1.02
SDCBP-204ENST00000447182 KRT86O43790 486 aa21.39■■□□□ 1.01
SDCBP-204ENST00000447182 MAP9Q49MG5 647 aa21.39■■□□□ 1.01
SDCBP-204ENST00000447182 CCDC170Q8IYT3 715 aa21.39■■□□□ 1.01
SDCBP-204ENST00000447182 ANKS1AQ92625 1134 aa21.39■■□□□ 1.01
SDCBP-204ENST00000447182 CUEDC2Q9H467 287 aa21.39■■□□□ 1.01
SDCBP-204ENST00000447182 MAGEF1Q9HAY2 307 aa21.39■■□□□ 1.01
SDCBP-204ENST00000447182 ATP1A1P05023 1023 aaKnown RBP21.38■■□□□ 1.01
SDCBP-204ENST00000447182 CYLC1P35663 651 aaPredicted RBP21.38■■□□□ 1.01
SDCBP-204ENST00000447182 PRPHP41219 470 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 CKAP4Q07065 602 aaKnown RBP21.38■■□□□ 1.01
SDCBP-204ENST00000447182 ITPK1Q13572 414 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 CLEC4GQ6UXB4 293 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 DGKHQ86XP1 1220 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 CCDC102AQ96A19 550 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 KAT14Q9H8E8 782 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 EXOC1Q9NV70 894 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 TAF1P21675 1872 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 CCDC194A0A1B0GVG4 234 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 ANO9A1A5B4 782 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 GTF2E1P29083 439 aaPredicted RBP21.38■■□□□ 1.01
SDCBP-204ENST00000447182 UBA7P41226 1012 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 MMS19Q96T76 1030 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 HDAC6Q9UBN7 1215 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 MAST2Q6P0Q8 1798 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 CASZ1Q86V15 1759 aa21.38■■□□□ 1.01
SDCBP-204ENST00000447182 EIF3CLB5ME19 914 aaKnown RBP21.37■■□□□ 1.01
SDCBP-204ENST00000447182 ENC1O14682 589 aa21.37■■□□□ 1.01
SDCBP-204ENST00000447182 CYP2D6P10635 497 aa21.37■■□□□ 1.01
SDCBP-204ENST00000447182 C3orf67Q6ZVT6 689 aa21.37■■□□□ 1.01
SDCBP-204ENST00000447182 GPKOWQ92917 476 aaPredicted RBP eCLIP21.37■■□□□ 1.011e-6■□□□□ 11.3
SDCBP-204ENST00000447182 EIF3CQ99613 913 aaKnown RBP21.37■■□□□ 1.01
SDCBP-204ENST00000447182 DUSP9Q99956 384 aaKnown RBP21.37■■□□□ 1.01
SDCBP-204ENST00000447182 TUBGCP2Q9BSJ2 902 aa21.37■■□□□ 1.01
SDCBP-204ENST00000447182 TMEM60Q9H2L4 133 aa21.37■■□□□ 1.01
SDCBP-204ENST00000447182 PCDHA6Q9UN73 950 aa21.37■■□□□ 1.01
SDCBP-204ENST00000447182 PCDHA8Q9Y5H6 950 aa21.37■■□□□ 1.01
SDCBP-204ENST00000447182 GNAQP50148 359 aa21.37■■□□□ 1.01
SDCBP-204ENST00000447182 ZBED6P86452 979 aa21.37■■□□□ 1.01
SDCBP-204ENST00000447182 CDK17Q00537 523 aa21.37■■□□□ 1.01
SDCBP-204ENST00000447182 ERFEQ4G0M1 354 aa21.37■■□□□ 1.01
SDCBP-204ENST00000447182 JAKMIP2Q96AA8 810 aa21.37■■□□□ 1.01
SDCBP-204ENST00000447182 TRERF1Q96PN7 1200 aa21.37■■□□□ 1.01
SDCBP-204ENST00000447182 PURBQ96QR8 312 aaKnown RBP21.37■■□□□ 1.01
SDCBP-204ENST00000447182 ZNHIT6Q9NWK9 470 aaKnown RBP21.37■■□□□ 1.01
SDCBP-204ENST00000447182 PP2D1A8MPX8 630 aa21.36■■□□□ 1.01
SDCBP-204ENST00000447182 PES1O00541 588 aaKnown RBP21.36■■□□□ 1.01
SDCBP-204ENST00000447182 GRM4Q14833 912 aa21.36■■□□□ 1.01
SDCBP-204ENST00000447182 FIGNQ5HY92 759 aa21.36■■□□□ 1.01
SDCBP-204ENST00000447182 TYW1BQ6NUM6 668 aa21.36■■□□□ 1.01
SDCBP-204ENST00000447182 KIAA1328Q86T90 577 aa21.36■■□□□ 1.01
SDCBP-204ENST00000447182 PNMA1Q8ND90 353 aa21.36■■□□□ 1.01
SDCBP-204ENST00000447182 RASSF8Q8NHQ8 419 aa21.36■■□□□ 1.01
SDCBP-204ENST00000447182 RASGRP4Q8TDF6 673 aa21.36■■□□□ 1.01
SDCBP-204ENST00000447182 BICDL2A1A5D9 508 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 RASSF10A6NK89 507 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 B4DLN1 442 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 CCNE1P24864 410 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 PPP1R2P41236 205 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 CSGALNACT2Q8N6G5 542 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 AK8Q96MA6 479 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 AGPAT5Q9NUQ2 364 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 MYH1P12882 1939 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 CCDC88AQ3V6T2 1871 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 TRIM21P19474 475 aaKnown RBP21.35■■□□□ 1.01
SDCBP-204ENST00000447182 SRLQ86TD4 932 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 FAM114A1Q8IWE2 563 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 STAG2Q8N3U4 1231 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 IQCDQ96DY2 449 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 NHEJ1Q9H9Q4 299 aaPredicted RBP21.35■■□□□ 1.01
SDCBP-204ENST00000447182 IL17RBQ9NRM6 502 aa21.35■■□□□ 1.01
SDCBP-204ENST00000447182 A0A1W2PQJ5 194 aa21.34■■□□□ 1.01
SDCBP-204ENST00000447182 IPO7O95373 1038 aaKnown RBP21.34■■□□□ 1.01
SDCBP-204ENST00000447182 CCDC178Q5BJE1 867 aa21.34■■□□□ 1.01
SDCBP-204ENST00000447182 ZSCAN29Q8IWY8 852 aaPredicted RBP21.34■■□□□ 1.01
SDCBP-204ENST00000447182 LRRC15Q8TF66 581 aa21.34■■□□□ 1.01
SDCBP-204ENST00000447182 P2RX5Q93086 422 aa21.34■■□□□ 1.01
SDCBP-204ENST00000447182 ERGIC2Q96RQ1 377 aa21.34■■□□□ 1.01
SDCBP-204ENST00000447182 CDCA7Q9BWT1 371 aaPredicted RBP21.34■■□□□ 1.01
SDCBP-204ENST00000447182 MKRN1Q9UHC7 482 aaKnown RBP21.34■■□□□ 1.01
SDCBP-204ENST00000447182 MAD2L2Q9UI95 211 aa21.34■■□□□ 1.01
SDCBP-204ENST00000447182 FLT1P17948 1338 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms