RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 TLR3O15455 904 aaKnown RBP29.07■■■□□ 2.24
PMS1-214ENST00000446877 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.07■■■□□ 2.24
PMS1-214ENST00000446877 ARMCX2Q7L311 632 aa29.07■■■□□ 2.24
PMS1-214ENST00000446877 OSBP2Q969R2 916 aa29.07■■■□□ 2.24
PMS1-214ENST00000446877 UPF3AQ9H1J1 476 aaKnown RBP29.07■■■□□ 2.24
PMS1-214ENST00000446877 ISY1Q9ULR0 285 aaKnown RBP29.07■■■□□ 2.24
PMS1-214ENST00000446877 SYNPO2Q9UMS6 1093 aa29.07■■■□□ 2.24
PMS1-214ENST00000446877 TTC28Q96AY4 2481 aa29.06■■■□□ 2.24
PMS1-214ENST00000446877 IGKV6D-41A0A0C4DH26 115 aa29.06■■■□□ 2.24
PMS1-214ENST00000446877 RNF113AO15541 343 aaKnown RBP29.06■■■□□ 2.24
PMS1-214ENST00000446877 PRDM1O75626 825 aa29.06■■■□□ 2.24
PMS1-214ENST00000446877 TTLL1O95922 423 aa29.06■■■□□ 2.24
PMS1-214ENST00000446877 ZFYP08048 801 aaPredicted RBP29.06■■■□□ 2.24
PMS1-214ENST00000446877 IRX5P78411 483 aaPredicted RBP29.06■■■□□ 2.24
PMS1-214ENST00000446877 CEP95Q96GE4 821 aa29.06■■■□□ 2.24
PMS1-214ENST00000446877 PRDM6Q9NQX0 595 aa29.06■■■□□ 2.24
PMS1-214ENST00000446877 MTMR4Q9NYA4 1195 aa29.06■■■□□ 2.24
PMS1-214ENST00000446877 FDX1P10109 184 aa29.05■■■□□ 2.24
PMS1-214ENST00000446877 TMEM240Q5SV17 173 aa29.05■■■□□ 2.24
PMS1-214ENST00000446877 NOL8Q76FK4 1167 aaKnown RBP29.05■■■□□ 2.24
PMS1-214ENST00000446877 HOMER2Q9NSB8 354 aa29.05■■■□□ 2.24
PMS1-214ENST00000446877 PLXNA1Q9UIW2 1896 aa29.05■■■□□ 2.24
PMS1-214ENST00000446877 GPAA1O43292 621 aa29.04■■■□□ 2.24
PMS1-214ENST00000446877 BMP3P12645 472 aa29.04■■■□□ 2.24
PMS1-214ENST00000446877 CSF2RAP15509 400 aa29.04■■■□□ 2.24
PMS1-214ENST00000446877 TJAP1Q5JTD0 557 aa29.04■■■□□ 2.24
PMS1-214ENST00000446877 SLFN13Q68D06 897 aa29.04■■■□□ 2.24
PMS1-214ENST00000446877 PSRC1Q6PGN9 363 aaPredicted RBP29.04■■■□□ 2.24
PMS1-214ENST00000446877 C16orf59Q7L2K0 433 aa29.04■■■□□ 2.24
PMS1-214ENST00000446877 CCDC144CPQ8IYA2 1237 aa29.04■■■□□ 2.24
PMS1-214ENST00000446877 LRRC47Q8N1G4 583 aaKnown RBP29.04■■■□□ 2.24
PMS1-214ENST00000446877 GMCL1P1Q8NEA9 526 aa29.04■■■□□ 2.24
PMS1-214ENST00000446877 GAS2L1Q99501 681 aaPredicted RBP29.04■■■□□ 2.24
PMS1-214ENST00000446877 PPP1R12CQ9BZL4 782 aa29.04■■■□□ 2.24
PMS1-214ENST00000446877 ADCY6O43306 1168 aa29.03■■■□□ 2.24
PMS1-214ENST00000446877 FGD4Q96M96 766 aa29.03■■■□□ 2.24
PMS1-214ENST00000446877 TSPY3P0CV98 308 aa29.02■■■□□ 2.24
PMS1-214ENST00000446877 TSPY8P0CW00 308 aa29.02■■■□□ 2.24
PMS1-214ENST00000446877 LRRFIP1Q32MZ4 808 aaKnown RBP29.02■■■□□ 2.24
PMS1-214ENST00000446877 FAM126BQ8IXS8 530 aa29.02■■■□□ 2.24
PMS1-214ENST00000446877 USP38Q8NB14 1042 aa29.02■■■□□ 2.24
PMS1-214ENST00000446877 PBX4Q9BYU1 374 aa29.02■■■□□ 2.24
PMS1-214ENST00000446877 NACAP1Q9BZK3 213 aa29.02■■■□□ 2.24
PMS1-214ENST00000446877 ACAD9Q9H845 621 aa29.02■■■□□ 2.24
PMS1-214ENST00000446877 EPB41L4AQ9HCS5 686 aaPredicted RBP29.02■■■□□ 2.24
PMS1-214ENST00000446877 PATL2C9JE40 543 aaKnown RBP29.01■■■□□ 2.23
PMS1-214ENST00000446877 SLC3A2P08195 630 aaKnown RBP29.01■■■□□ 2.23
PMS1-214ENST00000446877 ACRP10323 421 aa29.01■■■□□ 2.23
PMS1-214ENST00000446877 CNTN2Q02246 1040 aa29.01■■■□□ 2.23
PMS1-214ENST00000446877 TNFAIP2Q03169 654 aa29.01■■■□□ 2.23
PMS1-214ENST00000446877 PDE4BQ07343 736 aa29.01■■■□□ 2.23
PMS1-214ENST00000446877 IKQ13123 557 aaPredicted RBP29.01■■■□□ 2.23
PMS1-214ENST00000446877 ZNF365Q70YC5 407 aa29.01■■■□□ 2.23
PMS1-214ENST00000446877 CHURC1Q8WUH1 139 aa29.01■■■□□ 2.23
PMS1-214ENST00000446877 GRXCR1A8MXD5 290 aa29■■■□□ 2.23
PMS1-214ENST00000446877 TMEM232C9JQI7 657 aa29■■■□□ 2.23
PMS1-214ENST00000446877 PBX2P40425 430 aa29■■■□□ 2.23
PMS1-214ENST00000446877 RASIP1Q5U651 963 aa29■■■□□ 2.23
PMS1-214ENST00000446877 IFNL3Q8IZI9 196 aa29■■■□□ 2.23
PMS1-214ENST00000446877 NEDD1Q8NHV4 660 aa29■■■□□ 2.23
PMS1-214ENST00000446877 PPM1EQ8WY54 764 aa29■■■□□ 2.23
PMS1-214ENST00000446877 MTIF3Q9H2K0 278 aaKnown RBP29■■■□□ 2.23
PMS1-214ENST00000446877 MSRAQ9UJ68 235 aa29■■■□□ 2.23
PMS1-214ENST00000446877 ASB14A6NK59 587 aa28.99■■■□□ 2.23
PMS1-214ENST00000446877 CABYRO75952 493 aa28.99■■■□□ 2.23
PMS1-214ENST00000446877 STAT2P52630 851 aa28.99■■■□□ 2.23
PMS1-214ENST00000446877 BEX3Q00994 111 aa28.99■■■□□ 2.23
PMS1-214ENST00000446877 FAM133AQ8N9E0 248 aa28.99■■■□□ 2.23
PMS1-214ENST00000446877 KATNBL1Q9H079 304 aa28.99■■■□□ 2.23
PMS1-214ENST00000446877 AP5M1Q9H0R1 490 aa28.99■■■□□ 2.23
PMS1-214ENST00000446877 RCAN3Q9UKA8 241 aa28.99■■■□□ 2.23
PMS1-214ENST00000446877 M0R2C6 588 aa28.98■■■□□ 2.23
PMS1-214ENST00000446877 CYP2C18P33260 490 aa28.98■■■□□ 2.23
PMS1-214ENST00000446877 NKX3-2P78367 333 aa28.98■■■□□ 2.23
PMS1-214ENST00000446877 FAM160B2Q86V87 743 aa28.98■■■□□ 2.23
PMS1-214ENST00000446877 IL23AQ9NPF7 189 aa28.98■■■□□ 2.23
PMS1-214ENST00000446877 RNF146Q9NTX7 359 aa28.98■■■□□ 2.23
PMS1-214ENST00000446877 CTAGE5O15320 804 aa28.97■■■□□ 2.23
PMS1-214ENST00000446877 SLC1A4P43007 532 aa28.97■■■□□ 2.23
PMS1-214ENST00000446877 TFAP4Q01664 338 aa28.97■■■□□ 2.23
PMS1-214ENST00000446877 RAB30Q15771 203 aa28.97■■■□□ 2.23
PMS1-214ENST00000446877 TKFCQ3LXA3 575 aa28.97■■■□□ 2.23
PMS1-214ENST00000446877 TSHZ3Q63HK5 1081 aa28.97■■■□□ 2.23
PMS1-214ENST00000446877 CXCL17Q6UXB2 119 aa28.97■■■□□ 2.23
PMS1-214ENST00000446877 STAG1Q8WVM7 1258 aa28.97■■■□□ 2.23
PMS1-214ENST00000446877 PRDM12Q9H4Q4 367 aa28.97■■■□□ 2.23
PMS1-214ENST00000446877 A1CFQ9NQ94 594 aaKnown RBP28.97■■■□□ 2.23
PMS1-214ENST00000446877 GREB1LQ9C091 1923 aaPredicted RBP28.96■■■□□ 2.23
PMS1-214ENST00000446877 ZEB2O60315 1214 aa28.96■■■□□ 2.23
PMS1-214ENST00000446877 CD4P01730 458 aa28.96■■■□□ 2.23
PMS1-214ENST00000446877 FGBP02675 491 aa28.96■■■□□ 2.23
PMS1-214ENST00000446877 PPP4R3BQ5MIZ7 849 aa28.96■■■□□ 2.23
PMS1-214ENST00000446877 GMCL1Q96IK5 515 aa28.96■■■□□ 2.23
PMS1-214ENST00000446877 AGBL1Q96MI9 1066 aa28.96■■■□□ 2.23
PMS1-214ENST00000446877 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.95■■■□□ 2.22
PMS1-214ENST00000446877 FSCN1Q16658 493 aaKnown RBP28.95■■■□□ 2.22
PMS1-214ENST00000446877 AKNAD1Q5T1N1 836 aa28.95■■■□□ 2.22
PMS1-214ENST00000446877 HERVK_113Q902F9 699 aa28.95■■■□□ 2.22
PMS1-214ENST00000446877 TRERF1Q96PN7 1200 aa28.95■■■□□ 2.22
PMS1-214ENST00000446877 SEZ6LQ9BYH1 1024 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms