RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	MNAT1	P51948	309 aa		14.03	□□□□□ -0.16
DDR1-238	ENST00000446312	KANK3	Q6NY19	840 aa		14.03	□□□□□ -0.16
DDR1-238	ENST00000446312	CEP120	Q8N960	986 aa		14.03	□□□□□ -0.16
DDR1-238	ENST00000446312	MS4A14	Q96JA4	679 aa		14.03	□□□□□ -0.16
DDR1-238	ENST00000446312	WDR17	Q8IZU2	1322 aa		14.03	□□□□□ -0.16
DDR1-238	ENST00000446312	STRCP1	A6NGW2	1772 aa		14.03	□□□□□ -0.16
DDR1-238	ENST00000446312	IPO7	O95373	1038 aa	Known RBP	14.03	□□□□□ -0.16
DDR1-238	ENST00000446312	FAM182B	Q5T319	152 aa		14.03	□□□□□ -0.16
DDR1-238	ENST00000446312	COG1	Q8WTW3	980 aa		14.03	□□□□□ -0.16
DDR1-238	ENST00000446312	GOLPH3	Q9H4A6	298 aa		14.03	□□□□□ -0.16
DDR1-238	ENST00000446312	MRC1	P22897	1456 aa		14.03	□□□□□ -0.16
DDR1-238	ENST00000446312	CCDC194	A0A1B0GVG4	234 aa		14.02	□□□□□ -0.16
DDR1-238	ENST00000446312	ATP2C2	O75185	946 aa		14.02	□□□□□ -0.16
DDR1-238	ENST00000446312	USP5	P45974	858 aa		14.02	□□□□□ -0.16
DDR1-238	ENST00000446312	GUCY2F	P51841	1108 aa		14.02	□□□□□ -0.16
DDR1-238	ENST00000446312	HERVK_113	P62684	666 aa		14.02	□□□□□ -0.16
DDR1-238	ENST00000446312	NFRKB	Q6P4R8	1299 aa		14.02	□□□□□ -0.16
DDR1-238	ENST00000446312	LRRC31	Q6UY01	552 aa		14.02	□□□□□ -0.16
DDR1-238	ENST00000446312	C2CD5	Q86YS7	1000 aa		14.02	□□□□□ -0.16
DDR1-238	ENST00000446312	TMTC1	Q8IUR5	882 aa		14.02	□□□□□ -0.16
DDR1-238	ENST00000446312	COL18A1	P39060	1754 aa		14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	TEC	P42680	631 aa		14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	MUM1L1	Q5H9M0	696 aa		14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	MARCH10	Q8NA82	808 aa	Predicted RBP	14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	STAG1	Q8WVM7	1258 aa		14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	SAR1B	Q9Y6B6	198 aa		14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	MST1R	Q04912	1400 aa		14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	CYP19A1	P11511	503 aa	Predicted RBP	14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	PDE4D	Q08499	809 aa		14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	DIXDC1	Q155Q3	683 aa		14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	CDKAL1	Q5VV42	579 aa		14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	OR8K1	Q8NGG5	319 aa		14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	GOLGA5	Q8TBA6	731 aa		14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	UBA5	Q9GZZ9	404 aa		14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	DMGDH	Q9UI17	866 aa	Known RBP	14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	SH3BP1	Q9Y3L3	701 aa		14.02	□□□□□ -0.17
DDR1-238	ENST00000446312	MAP2K7	O14733	419 aa		14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	SLURP2	P0DP57	97 aa		14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	ARID4A	P29374	1257 aa	Predicted RBP	14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	TFAP4	Q01664	338 aa		14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	STIM1	Q13586	685 aa		14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	TDRD12	Q587J7	1177 aa	Known RBP	14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	IRF2BP1	Q8IU81	584 aa		14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	CLEC10A	Q8IUN9	316 aa		14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	FBXL16	Q8N461	479 aa		14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	PHF20	Q9BVI0	1012 aa		14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	RNF41	Q9H4P4	317 aa	Predicted RBP	14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	TTF2	Q9UNY4	1162 aa	Known RBP	14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	EIF3CL	B5ME19	914 aa	Known RBP	14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	EPHB6	O15197	1021 aa		14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	CALR	P27797	417 aa	Known RBP	14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	GLIS3	Q8NEA6	775 aa		14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	LRRC15	Q8TF66	581 aa		14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	EXOC4	Q96A65	974 aa		14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	EIF3C	Q99613	913 aa	Known RBP	14.01	□□□□□ -0.17
DDR1-238	ENST00000446312	KIF1C	O43896	1103 aa	Known RBP	14	□□□□□ -0.17
DDR1-238	ENST00000446312	TXK	P42681	527 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	STK4	Q13043	487 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	SEC23A	Q15436	765 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	MAP9	Q49MG5	647 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	AFAP1L1	Q8TED9	768 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	CTAGE1	Q96RT6	745 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	LRRC1	Q9BTT6	524 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	NOC4L	Q9BVI4	516 aa	Known RBP	14	□□□□□ -0.17
DDR1-238	ENST00000446312	KIF1A	Q12756	1690 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	BRINP3	Q76B58	766 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	CELF1	Q92879	486 aa	Known RBP	14	□□□□□ -0.17
DDR1-238	ENST00000446312	GSDMA	Q96QA5	445 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	TUBGCP2	Q9BSJ2	902 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	MPHOSPH10	O00566	681 aa	Known RBP	14	□□□□□ -0.17
DDR1-238	ENST00000446312	AKR1B10	O60218	316 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	TUBB4A	P04350	444 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	SCG2	P13521	617 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	TROAP	Q12815	778 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	TRADD	Q15628	312 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	TXNRD3	Q86VQ6	643 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	MB21D1	Q8N884	522 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	MKNK2	Q9HBH9	465 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	CAPN6	Q9Y6Q1	641 aa		14	□□□□□ -0.17
DDR1-238	ENST00000446312	ABCC12	Q96J65	1359 aa		13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	FAM237A	A0A1B0GTK4	181 aa		13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	NUTM2E	B1AL46	878 aa	Predicted RBP	13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	CCDC181	Q5TID7	509 aa		13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	WDR59	Q6PJI9	974 aa		13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	DTHD1	Q6ZMT9	781 aa		13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	BIN2	Q9UBW5	565 aa	Predicted RBP	13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	CCNT1	O60563	726 aa	Known RBP	13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	PIP4K2B	P78356	416 aa		13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	NPY5R	Q15761	445 aa		13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	NBPF20	Q3BBV1	942 aa		13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	ERFE	Q4G0M1	354 aa		13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	NT5DC1	Q5TFE4	455 aa		13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	RRAGA	Q7L523	313 aa		13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	CCDC42	Q96M95	316 aa		13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	SELENOO	Q9BVL4	669 aa		13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	RNF26	Q9BY78	433 aa	Predicted RBP	13.99	□□□□□ -0.17
DDR1-238	ENST00000446312	UBXN6	Q9BZV1	441 aa		13.99	□□□□□ -0.17

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