RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 DEXIO95424 95 aa20.13■□□□□ 0.81
SGCE-206ENST00000445866 GJB2P29033 226 aa20.13■□□□□ 0.81
SGCE-206ENST00000445866 PARK7Q99497 189 aaKnown RBP20.13■□□□□ 0.81
SGCE-206ENST00000445866 ZCCHC17Q9NP64 241 aaKnown RBP20.13■□□□□ 0.81
SGCE-206ENST00000445866 PKN1Q16512 942 aa20.12■□□□□ 0.81
SGCE-206ENST00000445866 HEATR3Q7Z4Q2 680 aa20.12■□□□□ 0.81
SGCE-206ENST00000445866 FBXO11Q86XK2 927 aa20.12■□□□□ 0.81
SGCE-206ENST00000445866 POTEDQ86YR6 584 aa20.12■□□□□ 0.81
SGCE-206ENST00000445866 MB21D1Q8N884 522 aa20.12■□□□□ 0.81
SGCE-206ENST00000445866 WASF1Q92558 559 aa20.12■□□□□ 0.81
SGCE-206ENST00000445866 PAGR1Q9BTK6 254 aa20.12■□□□□ 0.81
SGCE-206ENST00000445866 RAVER2Q9HCJ3 691 aaKnown RBP20.12■□□□□ 0.81
SGCE-206ENST00000445866 SCG2P13521 617 aa20.11■□□□□ 0.81
SGCE-206ENST00000445866 PLS1Q14651 629 aa20.11■□□□□ 0.81
SGCE-206ENST00000445866 TAF1CQ15572 869 aaPredicted RBP20.11■□□□□ 0.81
SGCE-206ENST00000445866 PFKFB3Q16875 520 aaPredicted RBP20.11■□□□□ 0.81
SGCE-206ENST00000445866 POTEEQ6S8J3 1075 aa20.11■□□□□ 0.81
SGCE-206ENST00000445866 LBX2Q6XYB7 198 aa20.11■□□□□ 0.81
SGCE-206ENST00000445866 AGBL1Q96MI9 1066 aa20.11■□□□□ 0.81
SGCE-206ENST00000445866 IPO9Q96P70 1041 aaKnown RBP20.11■□□□□ 0.81
SGCE-206ENST00000445866 RBPJLQ9UBG7 517 aa20.11■□□□□ 0.81
SGCE-206ENST00000445866 KIF3AQ9Y496 699 aa20.11■□□□□ 0.81
SGCE-206ENST00000445866 ALDH1A1P00352 501 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 TMEM132BQ14DG7 1078 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 COA7Q96BR5 231 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 ALG1Q9BT22 464 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 AMNQ9BXJ7 453 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 ZFYVE28Q9HCC9 887 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 RABGAP1Q9Y3P9 1069 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 PCDHA1Q9Y5I3 950 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 STK36Q9NRP7 1315 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 TRPM7Q96QT4 1865 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 PEX10O60683 326 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 PPP1R11O60927 126 aaPredicted RBP20.1■□□□□ 0.81
SGCE-206ENST00000445866 STAT3P40763 770 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 GCLCP48506 637 aaPredicted RBP20.1■□□□□ 0.81
SGCE-206ENST00000445866 TRAF1Q13077 416 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 USH1GQ495M9 461 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 GTF3C2Q8WUA4 911 aaPredicted RBP20.1■□□□□ 0.81
SGCE-206ENST00000445866 GPKOWQ92917 476 aaPredicted RBP eCLIP20.1■□□□□ 0.81
SGCE-206ENST00000445866 AIFM3Q96NN9 605 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 BTBD7Q9P203 1132 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 CCPG1Q9ULG6 757 aa20.1■□□□□ 0.81
SGCE-206ENST00000445866 ICAM1P05362 532 aa20.09■□□□□ 0.81
SGCE-206ENST00000445866 REPS2Q8NFH8 660 aa20.09■□□□□ 0.81
SGCE-206ENST00000445866 CWC22Q9HCG8 908 aaKnown RBP20.09■□□□□ 0.81
SGCE-206ENST00000445866 ZNF536O15090 1300 aa20.08■□□□□ 0.81
SGCE-206ENST00000445866 FOSBP53539 338 aa20.08■□□□□ 0.81
SGCE-206ENST00000445866 OAZ1P54368 228 aa20.08■□□□□ 0.81
SGCE-206ENST00000445866 WWC2Q6AWC2 1192 aa20.08■□□□□ 0.81
SGCE-206ENST00000445866 ANKRD13CQ8N6S4 541 aa20.08■□□□□ 0.81
SGCE-206ENST00000445866 TXNRD2Q9NNW7 524 aa20.08■□□□□ 0.81
SGCE-206ENST00000445866 BARHL2Q9NY43 387 aa20.08■□□□□ 0.81
SGCE-206ENST00000445866 PNMA2Q9UL42 364 aa20.08■□□□□ 0.81
SGCE-206ENST00000445866 OTOFQ9HC10 1997 aa20.08■□□□□ 0.8
SGCE-206ENST00000445866 ATP2A1O14983 1001 aa20.07■□□□□ 0.8
SGCE-206ENST00000445866 CA12O43570 354 aa20.07■□□□□ 0.8
SGCE-206ENST00000445866 XBP1P17861 261 aa20.07■□□□□ 0.8
SGCE-206ENST00000445866 Q3C1V9 767 aa20.07■□□□□ 0.8
SGCE-206ENST00000445866 LARP1BQ659C4 914 aaKnown RBP20.07■□□□□ 0.8
SGCE-206ENST00000445866 GPRC5AQ8NFJ5 357 aa20.07■□□□□ 0.8
SGCE-206ENST00000445866 TEX13BQ9BXU2 312 aa20.07■□□□□ 0.8
SGCE-206ENST00000445866 ZNF214Q9UL59 606 aaPredicted RBP20.07■□□□□ 0.8
SGCE-206ENST00000445866 MYH8P13535 1937 aa20.07■□□□□ 0.8
SGCE-206ENST00000445866 CNMDO75829 334 aa20.07■□□□□ 0.8
SGCE-206ENST00000445866 ALAS1P13196 640 aa20.07■□□□□ 0.8
SGCE-206ENST00000445866 TAL1P17542 331 aaPredicted RBP20.07■□□□□ 0.8
SGCE-206ENST00000445866 TRIM29Q14134 588 aa20.07■□□□□ 0.8
SGCE-206ENST00000445866 SNRNP48Q6IEG0 339 aaKnown RBP20.07■□□□□ 0.8
SGCE-206ENST00000445866 SPATC1LQ9H0A9 340 aa20.07■□□□□ 0.8
SGCE-206ENST00000445866 VPS54Q9P1Q0 977 aa20.07■□□□□ 0.8
SGCE-206ENST00000445866 CPA4Q9UI42 421 aa20.07■□□□□ 0.8
SGCE-206ENST00000445866 STXBP3O00186 592 aa20.06■□□□□ 0.8
SGCE-206ENST00000445866 TLR2O60603 784 aa20.06■□□□□ 0.8
SGCE-206ENST00000445866 TRPA1O75762 1119 aa20.06■□□□□ 0.8
SGCE-206ENST00000445866 NAPAP54920 295 aa20.06■□□□□ 0.8
SGCE-206ENST00000445866 CRHR2Q13324 411 aa20.06■□□□□ 0.8
SGCE-206ENST00000445866 C8orf76Q96K31 380 aa20.06■□□□□ 0.8
SGCE-206ENST00000445866 HOMER2Q9NSB8 354 aa20.06■□□□□ 0.8
SGCE-206ENST00000445866 GJB4Q9NTQ9 266 aa20.06■□□□□ 0.8
SGCE-206ENST00000445866 MRPL11Q9Y3B7 192 aaKnown RBP20.06■□□□□ 0.8
SGCE-206ENST00000445866 hCG_1984214I3L0E3 225 aa20.05■□□□□ 0.8
SGCE-206ENST00000445866 PDCP20941 246 aa20.05■□□□□ 0.8
SGCE-206ENST00000445866 NLRP5P59047 1200 aa20.05■□□□□ 0.8
SGCE-206ENST00000445866 ERVK-9P63128 1117 aa20.05■□□□□ 0.8
SGCE-206ENST00000445866 ERVK-24P63145 666 aa20.05■□□□□ 0.8
SGCE-206ENST00000445866 GUCY1B3Q02153 619 aa20.05■□□□□ 0.8
SGCE-206ENST00000445866 ZNF713Q8N859 430 aaPredicted RBP20.05■□□□□ 0.8
SGCE-206ENST00000445866 CCDC12Q8WUD4 166 aaPredicted RBP20.05■□□□□ 0.8
SGCE-206ENST00000445866 TRERF1Q96PN7 1200 aa20.05■□□□□ 0.8
SGCE-206ENST00000445866 SH3GLB2Q9NR46 395 aa20.05■□□□□ 0.8
SGCE-206ENST00000445866 RNF186Q9NXI6 227 aa20.05■□□□□ 0.8
SGCE-206ENST00000445866 RIPK3Q9Y572 518 aa20.05■□□□□ 0.8
SGCE-206ENST00000445866 ATAD5Q96QE3 1844 aa20.04■□□□□ 0.8
SGCE-206ENST00000445866 H3BQV1 296 aa20.04■□□□□ 0.8
SGCE-206ENST00000445866 IFFO2Q5TF58 517 aa20.04■□□□□ 0.8
SGCE-206ENST00000445866 RIOX2Q8IUF8 465 aa20.04■□□□□ 0.8
SGCE-206ENST00000445866 CCAR1Q8IX12 1150 aaKnown RBP20.04■□□□□ 0.8
SGCE-206ENST00000445866 DNAJC5GQ8N7S2 189 aa20.04■□□□□ 0.8
SGCE-206ENST00000445866 MOV10L1Q9BXT6 1211 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms