RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 CBFA2T2O43439 604 aa19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 NAA30Q147X3 362 aaPredicted RBP19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 NONOQ15233 471 aaKnown RBP eCLIP19.01■□□□□ 0.637e-7■■■■□ 26.1
LAPTM4B-201ENST00000445593 E2F4Q16254 413 aa19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 NT5DC1Q5TFE4 455 aa19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 POTEDQ86YR6 584 aa19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 REXO1Q8N1G1 1221 aaKnown RBP19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 SPZ1Q9BXG8 430 aa19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 SH3GLB2Q9NR46 395 aa19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 GABPAQ06546 454 aa19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 CEP135Q66GS9 1140 aa19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.01■□□□□ 0.632e-6■□□□□ 8.3
LAPTM4B-201ENST00000445593 V9GYY5 206 aaPredicted RBP19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 M0R2N6 131 aa19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 TTLL1O95922 423 aa19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 PDXDC2PQ6P474 469 aa19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 CCAR2Q8N163 923 aaKnown RBP19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 NUP88Q99567 741 aaPredicted RBP19.01■□□□□ 0.63
LAPTM4B-201ENST00000445593 CDK5RAP2Q96SN8 1893 aa19■□□□□ 0.63
LAPTM4B-201ENST00000445593 USP17L10C9JJH3 530 aa19■□□□□ 0.63
LAPTM4B-201ENST00000445593 IKQ13123 557 aaPredicted RBP19■□□□□ 0.63
LAPTM4B-201ENST00000445593 E4F1Q66K89 784 aaPredicted RBP19■□□□□ 0.63
LAPTM4B-201ENST00000445593 SH3RF1Q7Z6J0 888 aa19■□□□□ 0.63
LAPTM4B-201ENST00000445593 VSTM4Q8IW00 320 aa19■□□□□ 0.63
LAPTM4B-201ENST00000445593 ZMYND12Q9H0C1 365 aa19■□□□□ 0.63
LAPTM4B-201ENST00000445593 DNAJC18Q9H819 358 aa19■□□□□ 0.63
LAPTM4B-201ENST00000445593 NEMFO60524 1076 aa19■□□□□ 0.63
LAPTM4B-201ENST00000445593 TDP2O95551 362 aa19■□□□□ 0.63
LAPTM4B-201ENST00000445593 CCDC150Q8NCX0 1101 aa19■□□□□ 0.63
LAPTM4B-201ENST00000445593 LRRC15Q8TF66 581 aa19■□□□□ 0.63
LAPTM4B-201ENST00000445593 ZFP91Q96JP5 570 aaPredicted RBP19■□□□□ 0.63
LAPTM4B-201ENST00000445593 TRIM49BA6NDI0 452 aa18.99■□□□□ 0.63
LAPTM4B-201ENST00000445593 ADGRF4Q8IZF3 695 aa18.99■□□□□ 0.63
LAPTM4B-201ENST00000445593 ENOX1Q8TC92 643 aaKnown RBP18.99■□□□□ 0.63
LAPTM4B-201ENST00000445593 PRIMPOLQ96LW4 560 aa18.99■□□□□ 0.63
LAPTM4B-201ENST00000445593 DISC1Q9NRI5 854 aa18.99■□□□□ 0.63
LAPTM4B-201ENST00000445593 IMPACTQ9P2X3 320 aa18.99■□□□□ 0.63
LAPTM4B-201ENST00000445593 CLRN2A0PK11 232 aa18.99■□□□□ 0.63
LAPTM4B-201ENST00000445593 GNA11P29992 359 aa18.99■□□□□ 0.63
LAPTM4B-201ENST00000445593 PPIP5K2O43314 1243 aa18.99■□□□□ 0.63
LAPTM4B-201ENST00000445593 NEK8Q86SG6 692 aa18.99■□□□□ 0.63
LAPTM4B-201ENST00000445593 SPATA20Q8TB22 786 aa18.99■□□□□ 0.63
LAPTM4B-201ENST00000445593 HPS3Q969F9 1004 aa18.99■□□□□ 0.63
LAPTM4B-201ENST00000445593 LZTS2Q9BRK4 669 aa18.99■□□□□ 0.63
LAPTM4B-201ENST00000445593 PPP1R3GB7ZBB8 358 aa18.98■□□□□ 0.63
LAPTM4B-201ENST00000445593 RAD17O75943 681 aa18.98■□□□□ 0.63
LAPTM4B-201ENST00000445593 LONP1P36776 959 aaKnown RBP18.98■□□□□ 0.63
LAPTM4B-201ENST00000445593 PODNQ7Z5L7 613 aa18.98■□□□□ 0.63
LAPTM4B-201ENST00000445593 IPO4Q8TEX9 1081 aaKnown RBP18.98■□□□□ 0.63
LAPTM4B-201ENST00000445593 CCDC12Q8WUD4 166 aaPredicted RBP18.98■□□□□ 0.63
LAPTM4B-201ENST00000445593 RPN1P04843 607 aaKnown RBP18.98■□□□□ 0.63
LAPTM4B-201ENST00000445593 PLCG1P19174 1290 aa18.98■□□□□ 0.63
LAPTM4B-201ENST00000445593 SEPT2Q15019 361 aa18.98■□□□□ 0.63
LAPTM4B-201ENST00000445593 SPICE1Q8N0Z3 855 aa18.98■□□□□ 0.63
LAPTM4B-201ENST00000445593 TRIML1Q8N9V2 468 aa18.98■□□□□ 0.63
LAPTM4B-201ENST00000445593 GSDMAQ96QA5 445 aa18.98■□□□□ 0.63
LAPTM4B-201ENST00000445593 VPS16Q9H269 839 aa18.98■□□□□ 0.63
LAPTM4B-201ENST00000445593 PPP1R11O60927 126 aaPredicted RBP18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 OR52Z1P0C646 297 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 ZNF18P17022 549 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 NAALADL2Q58DX5 795 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 JMJD4Q9H9V9 463 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 NRDCO43847 1150 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 DACT2Q5SW24 774 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 KRT25Q7Z3Z0 450 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 FLAD1Q8NFF5 587 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 FAM198AQ9UFP1 575 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 POTEMA6NI47 508 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 TCP10L2B9ZVM9 353 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 SLC37A4O43826 429 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 EEF2P13639 858 aaKnown RBP18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 ADCY7P51828 1080 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 CERKLQ49MI3 558 aaPredicted RBP18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 ARL6IP4Q66PJ3 421 aaKnown RBP18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 SH3BP5LQ7L8J4 393 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 DEFB132Q7Z7B7 95 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 CABP7Q86V35 215 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 DESI2Q9BSY9 194 aa18.97■□□□□ 0.63
LAPTM4B-201ENST00000445593 GTPBP6O43824 516 aaPredicted RBP18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 ERCC3P19447 782 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 ZNF543Q08ER8 600 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 NELFBQ8WX92 580 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 PPP1R13BQ96KQ4 1090 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 TAB2Q9NYJ8 693 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 ZBTB12Q9Y330 459 aaPredicted RBP18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 USP17L15C9J2P7 530 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 USP17L13C9JLJ4 530 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 USP17L11C9JVI0 530 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 USP17L18D6R9N7 530 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 USP17L22D6RA61 530 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 USP17L17D6RBQ6 530 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 USP17L19D6RCP7 530 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 USP17L20D6RJB6 530 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 DYNC1I1O14576 645 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 MARCH6O60337 910 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 TERF1P54274 439 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 USP17L24Q0WX57 530 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 USP17L6PQ6QN14 398 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 HHIPL2Q6UWX4 724 aa18.96■□□□□ 0.63
LAPTM4B-201ENST00000445593 SYT10Q6XYQ8 523 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms