RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 VPS53Q5VIR6 699 aa11□□□□□ -0.65
LINC00642-203ENST00000444942 KRT40Q6A162 431 aa11□□□□□ -0.65
LINC00642-203ENST00000444942 CTR9Q6PD62 1173 aa11□□□□□ -0.65
LINC00642-203ENST00000444942 CWC27Q6UX04 472 aaKnown RBP11□□□□□ -0.65
LINC00642-203ENST00000444942 GTF3C2Q8WUA4 911 aaPredicted RBP11□□□□□ -0.65
LINC00642-203ENST00000444942 PAGR1Q9BTK6 254 aa11□□□□□ -0.65
LINC00642-203ENST00000444942 MTIF3Q9H2K0 278 aaKnown RBP11□□□□□ -0.65
LINC00642-203ENST00000444942 EPB41L4AQ9HCS5 686 aaPredicted RBP11□□□□□ -0.65
LINC00642-203ENST00000444942 DIAPH3Q9NSV4 1193 aa11□□□□□ -0.65
LINC00642-203ENST00000444942 PCDHA11Q9Y5I1 949 aa11□□□□□ -0.65
LINC00642-203ENST00000444942 COL4A4P53420 1690 aaPredicted RBP11□□□□□ -0.65
LINC00642-203ENST00000444942 KMT2EQ8IZD2 1858 aa11□□□□□ -0.65
LINC00642-203ENST00000444942 TECTAO75443 2155 aa11□□□□□ -0.65
LINC00642-203ENST00000444942 ATRXP46100 2492 aa10.99□□□□□ -0.65
LINC00642-203ENST00000444942 A0A1W2PQ45 241 aaPredicted RBP10.99□□□□□ -0.65
LINC00642-203ENST00000444942 A0A1W2PQY0 241 aa10.99□□□□□ -0.65
LINC00642-203ENST00000444942 PATL2C9JE40 543 aaKnown RBP10.99□□□□□ -0.65
LINC00642-203ENST00000444942 GH2P01242 217 aa10.99□□□□□ -0.65
LINC00642-203ENST00000444942 SHMT1P34896 483 aa10.99□□□□□ -0.65
LINC00642-203ENST00000444942 RABGGTBP53611 331 aa10.99□□□□□ -0.65
LINC00642-203ENST00000444942 RAB3GAP1Q15042 981 aa10.99□□□□□ -0.65
LINC00642-203ENST00000444942 ZYXQ15942 572 aaKnown RBP10.99□□□□□ -0.65
LINC00642-203ENST00000444942 CERKLQ49MI3 558 aaPredicted RBP10.99□□□□□ -0.65
LINC00642-203ENST00000444942 MCMDC2Q4G0Z9 681 aa10.99□□□□□ -0.65
LINC00642-203ENST00000444942 BMP2KLQ5H9B9 411 aa10.99□□□□□ -0.65
LINC00642-203ENST00000444942 FAM47AQ5JRC9 791 aa10.99□□□□□ -0.65
LINC00642-203ENST00000444942 C12orf60Q5U649 245 aa10.99□□□□□ -0.65
LINC00642-203ENST00000444942 ZNF589Q86UQ0 364 aaPredicted RBP10.99□□□□□ -0.65
LINC00642-203ENST00000444942 IFNL3Q8IZI9 196 aa10.99□□□□□ -0.65
LINC00642-203ENST00000444942 TMEM199Q8N511 208 aa10.99□□□□□ -0.65
LINC00642-203ENST00000444942 DAXXQ9UER7 740 aaPredicted RBP10.99□□□□□ -0.65
LINC00642-203ENST00000444942 USP17L5A8MUK1 530 aa10.98□□□□□ -0.65
LINC00642-203ENST00000444942 MYOGP15173 224 aa10.98□□□□□ -0.65
LINC00642-203ENST00000444942 GNAT2P19087 354 aa10.98□□□□□ -0.65
LINC00642-203ENST00000444942 GRB14Q14449 540 aa10.98□□□□□ -0.65
LINC00642-203ENST00000444942 ABCB5Q2M3G0 1257 aa10.98□□□□□ -0.65
LINC00642-203ENST00000444942 OLFML2BQ68BL8 750 aa10.98□□□□□ -0.65
LINC00642-203ENST00000444942 METTL16Q86W50 562 aaKnown RBP10.98□□□□□ -0.65
LINC00642-203ENST00000444942 PRRX2Q99811 253 aa10.98□□□□□ -0.65
LINC00642-203ENST00000444942 NAPBQ9H115 298 aa10.98□□□□□ -0.65
LINC00642-203ENST00000444942 EHD4Q9H223 541 aa10.98□□□□□ -0.65
LINC00642-203ENST00000444942 HELLSQ9NRZ9 838 aa10.98□□□□□ -0.65
LINC00642-203ENST00000444942 ZBTB21Q9ULJ3 1066 aa10.98□□□□□ -0.65
LINC00642-203ENST00000444942 EPOPA6NHQ4 379 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 SEC24BO95487 1268 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 ASNSP08243 561 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 CDK8P49336 464 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 CCNA1P78396 465 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 CTDSPL2Q05D32 466 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 GABPAQ06546 454 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 TCF15Q12870 199 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 TATDN1Q6P1N9 297 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 SAMD1Q6SPF0 538 aaPredicted RBP10.97□□□□□ -0.65
LINC00642-203ENST00000444942 CLEC10AQ8IUN9 316 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 NACAP1Q9BZK3 213 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 AS3MTQ9HBK9 375 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 CABP5Q9NP86 173 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 IL23AQ9NPF7 189 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 TMOD4Q9NZQ9 345 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 ARPP21Q9UBL0 812 aaPredicted RBP10.97□□□□□ -0.65
LINC00642-203ENST00000444942 ZNFX1Q9P2E3 1918 aaKnown RBP10.97□□□□□ -0.65
LINC00642-203ENST00000444942 MYH4Q9Y623 1939 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 CCDC171Q6TFL3 1326 aa10.97□□□□□ -0.65
LINC00642-203ENST00000444942 GVINP1Q7Z2Y8 2422 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 DMDP11532 3685 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 NCOR2Q9Y618 2525 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 FOXP2O15409 715 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 EIF5BO60841 1220 aaKnown RBP10.96□□□□□ -0.65
LINC00642-203ENST00000444942 PRDM1O75626 825 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 CNMDO75829 334 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 FGBP02675 491 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 AKR1B1P15121 316 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 BACE1P56817 501 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 MTMR2Q13614 643 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 SEPT2Q15019 361 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 IER5LQ5T953 404 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 WDR78Q5VTH9 848 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 RNF180Q86T96 592 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 WDR18Q9BV38 432 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 XPNPEP3Q9NQH7 507 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 INCENPQ9NQS7 918 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 RABGAP1Q9Y3P9 1069 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 IVNS1ABPQ9Y6Y0 642 aa10.96□□□□□ -0.65
LINC00642-203ENST00000444942 ACACBO00763 2458 aa10.96□□□□□ -0.66
LINC00642-203ENST00000444942 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.95□□□□□ -0.66
LINC00642-203ENST00000444942 HSPD1P10809 573 aaKnown RBP10.95□□□□□ -0.66
LINC00642-203ENST00000444942 IL9P15248 144 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 ID4P47928 161 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 HAND2P61296 217 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 PPARAQ07869 468 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 LEXMQ3ZCV2 418 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 SBK1Q52WX2 424 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 GIMAP6Q6P9H5 292 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 C16orf86Q6ZW13 317 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.95□□□□□ -0.66
LINC00642-203ENST00000444942 ACER1Q8TDN7 264 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 TBC1D32Q96NH3 1257 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 FEZ1Q99689 392 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 IL25Q9H293 177 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 UBE2ZQ9H832 354 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms