RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ADAMTS3O15072 1205 aa17.8■□□□□ 0.44
SNX13-204ENST00000444712 MYL5Q02045 173 aa17.8■□□□□ 0.44
SNX13-204ENST00000444712 USP49Q70CQ1 688 aa17.8■□□□□ 0.44
SNX13-204ENST00000444712 GMCL1P1Q8NEA9 526 aa17.8■□□□□ 0.44
SNX13-204ENST00000444712 SPATA20Q8TB22 786 aa17.8■□□□□ 0.44
SNX13-204ENST00000444712 MTMR8Q96EF0 704 aa17.8■□□□□ 0.44
SNX13-204ENST00000444712 ZBTB5O15062 677 aa17.79■□□□□ 0.44
SNX13-204ENST00000444712 SLC1A4P43007 532 aa17.79■□□□□ 0.44
SNX13-204ENST00000444712 SPDYE2Q495Y8 402 aa17.79■□□□□ 0.44
SNX13-204ENST00000444712 SLFN13Q68D06 897 aa17.79■□□□□ 0.44
SNX13-204ENST00000444712 SH3RF1Q7Z6J0 888 aa17.79■□□□□ 0.44
SNX13-204ENST00000444712 AK8Q96MA6 479 aa17.79■□□□□ 0.44
SNX13-204ENST00000444712 ZNF70Q9UC06 446 aaPredicted RBP17.79■□□□□ 0.44
SNX13-204ENST00000444712 MAN1B1Q9UKM7 699 aa17.79■□□□□ 0.44
SNX13-204ENST00000444712 SPC24Q8NBT2 197 aa17.79■□□□□ 0.44
SNX13-204ENST00000444712 RIC8AQ9NPQ8 531 aa17.79■□□□□ 0.44
SNX13-204ENST00000444712 MRPL12P52815 198 aaKnown RBP17.78■□□□□ 0.44
SNX13-204ENST00000444712 MORC3Q14149 939 aa17.78■□□□□ 0.44
SNX13-204ENST00000444712 DHX8Q14562 1220 aaKnown RBP17.78■□□□□ 0.44
SNX13-204ENST00000444712 SEPT2Q15019 361 aa17.78■□□□□ 0.44
SNX13-204ENST00000444712 JDP2Q8WYK2 163 aa17.78■□□□□ 0.44
SNX13-204ENST00000444712 CUL5Q93034 780 aa17.78■□□□□ 0.44
SNX13-204ENST00000444712 GMCL1Q96IK5 515 aa17.78■□□□□ 0.44
SNX13-204ENST00000444712 GSDMAQ96QA5 445 aa17.78■□□□□ 0.44
SNX13-204ENST00000444712 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
SNX13-204ENST00000444712 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.78■□□□□ 0.44
SNX13-204ENST00000444712 FAM196BA6NMK8 535 aa17.77■□□□□ 0.44
SNX13-204ENST00000444712 NEMFO60524 1076 aa17.77■□□□□ 0.44
SNX13-204ENST00000444712 FAM83AQ86UY5 434 aa17.77■□□□□ 0.44
SNX13-204ENST00000444712 PAGE5Q96GU1 130 aa17.77■□□□□ 0.44
SNX13-204ENST00000444712 NAP1L4Q99733 375 aaKnown RBP17.77■□□□□ 0.44
SNX13-204ENST00000444712 A0A087X0B3 334 aa17.77■□□□□ 0.43
SNX13-204ENST00000444712 FOXN1O15353 648 aa17.77■□□□□ 0.43
SNX13-204ENST00000444712 CCNT1O60563 726 aaKnown RBP17.77■□□□□ 0.43
SNX13-204ENST00000444712 ZBTB7AO95365 584 aa17.77■□□□□ 0.43
SNX13-204ENST00000444712 OR52Z1P0C646 297 aa17.77■□□□□ 0.43
SNX13-204ENST00000444712 PRR29P0C7W0 189 aa17.77■□□□□ 0.43
SNX13-204ENST00000444712 NCAPHQ15003 741 aa17.77■□□□□ 0.43
SNX13-204ENST00000444712 MCTP2Q6DN12 878 aa17.77■□□□□ 0.43
SNX13-204ENST00000444712 KCTD1Q719H9 257 aa17.77■□□□□ 0.43
SNX13-204ENST00000444712 CCSER1Q9C0I3 900 aa17.77■□□□□ 0.43
SNX13-204ENST00000444712 TCP10L2B9ZVM9 353 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 TNIP1Q15025 636 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 E2F4Q16254 413 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 IL17AQ16552 155 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 LETM2Q2VYF4 491 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 CIAPIN1Q6FI81 312 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 ISM2Q6H9L7 571 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 TBCKQ8TEA7 893 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 COA7Q96BR5 231 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 MAGEF1Q9HAY2 307 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 ARHGEF10LQ9HCE6 1279 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 CBFA2T2O43439 604 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 TBC1D12O60347 775 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 GDF11O95390 407 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 MYL1P05976 194 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 SEMA3FQ13275 785 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 TTBK2Q6IQ55 1244 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 CUEDC2Q9H467 287 aa17.76■□□□□ 0.43
SNX13-204ENST00000444712 BIN2Q9UBW5 565 aaPredicted RBP17.76■□□□□ 0.43
SNX13-204ENST00000444712 GH2P01242 217 aa17.75■□□□□ 0.43
SNX13-204ENST00000444712 ERCC5P28715 1186 aaPredicted RBP17.75■□□□□ 0.43
SNX13-204ENST00000444712 UBA7P41226 1012 aa17.75■□□□□ 0.43
SNX13-204ENST00000444712 DPYDQ12882 1025 aa17.75■□□□□ 0.43
SNX13-204ENST00000444712 JAKMIP3Q5VZ66 844 aa17.75■□□□□ 0.43
SNX13-204ENST00000444712 TTC12Q9H892 705 aaPredicted RBP17.75■□□□□ 0.43
SNX13-204ENST00000444712 DISC1Q9NRI5 854 aa17.75■□□□□ 0.43
SNX13-204ENST00000444712 RMND1Q9NWS8 449 aa17.75■□□□□ 0.43
SNX13-204ENST00000444712 CLRN2A0PK11 232 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 USP17L10C9JJH3 530 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 F5H6K3 240 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 GTPBP6O43824 516 aaPredicted RBP17.74■□□□□ 0.43
SNX13-204ENST00000444712 RAD21O60216 631 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 STAT6P42226 847 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 AFMP43652 599 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 CXCL9Q07325 125 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 KLRC3Q07444 240 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 TRAF1Q13077 416 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 PDXDC2PQ6P474 469 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.74■□□□□ 0.43
SNX13-204ENST00000444712 TMEM60Q9H2L4 133 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 IMPACTQ9P2X3 320 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 ZBTB12Q9Y330 459 aaPredicted RBP17.74■□□□□ 0.43
SNX13-204ENST00000444712 CNTNAP1P78357 1384 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 RPS12P25398 132 aaKnown RBP17.74■□□□□ 0.43
SNX13-204ENST00000444712 SLC16A2P36021 539 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 TNNI2P48788 182 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 CLK2P49760 499 aaKnown RBP17.74■□□□□ 0.43
SNX13-204ENST00000444712 CCDC186Q7Z3E2 898 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 SIAH1Q8IUQ4 282 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 TEX2Q8IWB9 1127 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 GRAMD1CQ8IYS0 662 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 RASSF8Q8NHQ8 419 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 ENOX1Q8TC92 643 aaKnown RBP17.74■□□□□ 0.43
SNX13-204ENST00000444712 RAB34Q9BZG1 259 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 CD2APQ9Y5K6 639 aa17.74■□□□□ 0.43
SNX13-204ENST00000444712 LTBP3Q9NS15 1303 aa17.73■□□□□ 0.43
SNX13-204ENST00000444712 MYH7BA7E2Y1 1941 aa17.73■□□□□ 0.43
SNX13-204ENST00000444712 SLURP2P0DP57 97 aa17.73■□□□□ 0.43
SNX13-204ENST00000444712 GCFC2P16383 781 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms