RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 KRT40Q6A162 431 aa12.18□□□□□ -0.46
COMMD1-203ENST00000444166 SNRNP48Q6IEG0 339 aaKnown RBP12.18□□□□□ -0.46
COMMD1-203ENST00000444166 LCORLQ8N3X6 602 aa12.18□□□□□ -0.46
COMMD1-203ENST00000444166 DDX11Q96FC9 970 aa12.18□□□□□ -0.46
COMMD1-203ENST00000444166 WDFY4Q6ZS81 3184 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 PI4K2BG5E9Z4 385 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 GTPBP6O43824 516 aaPredicted RBP12.17□□□□□ -0.46
COMMD1-203ENST00000444166 BCAR3O75815 825 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 CABYRO75952 493 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 CA3P07451 260 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 CDK8P49336 464 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 BEX3Q00994 111 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 SLC9C2Q5TAH2 1124 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 CXCL17Q6UXB2 119 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 ARMCX2Q7L311 632 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 ALYREFQ86V81 257 aaKnown RBP12.17□□□□□ -0.46
COMMD1-203ENST00000444166 AGBL1Q96MI9 1066 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 TRPV6Q9H1D0 765 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 KANSL2Q9H9L4 492 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 GOPCQ9HD26 462 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 CD320Q9NPF0 282 aa12.17□□□□□ -0.46
COMMD1-203ENST00000444166 ZNF532Q9HCE3 1301 aa12.16□□□□□ -0.46
COMMD1-203ENST00000444166 GREB1LQ9C091 1923 aaPredicted RBP12.16□□□□□ -0.46
COMMD1-203ENST00000444166 BAZ2AQ9UIF9 1905 aaKnown RBP12.16□□□□□ -0.46
COMMD1-203ENST00000444166 B4GALT4O60513 344 aa12.16□□□□□ -0.46
COMMD1-203ENST00000444166 ARHGEF15O94989 841 aa12.16□□□□□ -0.46
COMMD1-203ENST00000444166 ITGA7Q13683 1181 aa12.16□□□□□ -0.46
COMMD1-203ENST00000444166 TTLL4Q14679 1199 aa12.16□□□□□ -0.46
COMMD1-203ENST00000444166 TMEM67Q5HYA8 995 aa12.16□□□□□ -0.46
COMMD1-203ENST00000444166 C12orf60Q5U649 245 aa12.16□□□□□ -0.46
COMMD1-203ENST00000444166 C16orf86Q6ZW13 317 aa12.16□□□□□ -0.46
COMMD1-203ENST00000444166 RPUSD2Q8IZ73 545 aaKnown RBP12.16□□□□□ -0.46
COMMD1-203ENST00000444166 HLA-CQ95604 372 aa12.16□□□□□ -0.46
COMMD1-203ENST00000444166 SLF1Q9BQI6 1058 aa12.16□□□□□ -0.46
COMMD1-203ENST00000444166 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.16□□□□□ -0.46
COMMD1-203ENST00000444166 SEZ6LQ9BYH1 1024 aa12.16□□□□□ -0.46
COMMD1-203ENST00000444166 GNEQ9Y223 722 aaKnown RBP12.16□□□□□ -0.46
COMMD1-203ENST00000444166 CYP2D7A0A087X1C5 515 aa12.15□□□□□ -0.46
COMMD1-203ENST00000444166 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.15□□□□□ -0.46
COMMD1-203ENST00000444166 ZBBXA8MT70 800 aa12.15□□□□□ -0.46
COMMD1-203ENST00000444166 IPO8O15397 1037 aaKnown RBP12.15□□□□□ -0.46
COMMD1-203ENST00000444166 PRKAB2O43741 272 aa12.15□□□□□ -0.46
COMMD1-203ENST00000444166 PFKMP08237 780 aa12.15□□□□□ -0.46
COMMD1-203ENST00000444166 TTF1Q15361 905 aaPredicted RBP12.15□□□□□ -0.46
COMMD1-203ENST00000444166 CCDC144CPQ8IYA2 1237 aa12.15□□□□□ -0.46
COMMD1-203ENST00000444166 SCLYQ96I15 445 aa12.15□□□□□ -0.46
COMMD1-203ENST00000444166 NUP88Q99567 741 aaPredicted RBP12.15□□□□□ -0.46
COMMD1-203ENST00000444166 ARMT1Q9H993 441 aa12.15□□□□□ -0.46
COMMD1-203ENST00000444166 ZNF318Q5VUA4 2279 aa12.14□□□□□ -0.47
COMMD1-203ENST00000444166 TRIOO75962 3097 aa12.14□□□□□ -0.47
COMMD1-203ENST00000444166 LPXNO60711 386 aa12.14□□□□□ -0.47
COMMD1-203ENST00000444166 TAP1Q03518 808 aa12.14□□□□□ -0.47
COMMD1-203ENST00000444166 FSCN1Q16658 493 aaKnown RBP12.14□□□□□ -0.47
COMMD1-203ENST00000444166 CLUAP1Q96AJ1 413 aa12.14□□□□□ -0.47
COMMD1-203ENST00000444166 CERS4Q9HA82 394 aa12.14□□□□□ -0.47
COMMD1-203ENST00000444166 ATP8A2Q9NTI2 1148 aa12.14□□□□□ -0.47
COMMD1-203ENST00000444166 TET1Q8NFU7 2136 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 PRR33A8MZF0 331 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 USP17L12C9JPN9 530 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 USP17L21D6R901 530 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 PTGS1P23219 599 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 TNFAIP2Q03169 654 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 GRB10Q13322 594 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 TLK2Q86UE8 772 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 AACSQ86V21 672 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 CPXCR1Q8N123 301 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 ANKRD35Q8N283 1001 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 TMEM57Q8N5G2 664 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 FAM133AQ8N9E0 248 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 PRPF38AQ8NAV1 312 aaKnown RBP12.13□□□□□ -0.47
COMMD1-203ENST00000444166 CHST13Q8NET6 341 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 SLC9A7Q96T83 725 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 ALDH8A1Q9H2A2 487 aaPredicted RBP12.13□□□□□ -0.47
COMMD1-203ENST00000444166 C1orf115Q9H7X2 142 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 SLC38A10Q9HBR0 1119 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 FBXO40Q9UH90 709 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 SCN5AQ14524 2016 aa12.13□□□□□ -0.47
COMMD1-203ENST00000444166 ZBED9Q6R2W3 1325 aa12.12□□□□□ -0.47
COMMD1-203ENST00000444166 F5H6K3 240 aa12.12□□□□□ -0.47
COMMD1-203ENST00000444166 MBD4O95243 580 aa12.12□□□□□ -0.47
COMMD1-203ENST00000444166 NDUFB10O96000 172 aa12.12□□□□□ -0.47
COMMD1-203ENST00000444166 SMPD1P17405 629 aa12.12□□□□□ -0.47
COMMD1-203ENST00000444166 MRE11P49959 708 aa12.12□□□□□ -0.47
COMMD1-203ENST00000444166 PSMC6P62333 389 aa12.12□□□□□ -0.47
COMMD1-203ENST00000444166 CNTN2Q02246 1040 aa12.12□□□□□ -0.47
COMMD1-203ENST00000444166 KLRC3Q07444 240 aa12.12□□□□□ -0.47
COMMD1-203ENST00000444166 SPRED2Q7Z698 418 aa12.12□□□□□ -0.47
COMMD1-203ENST00000444166 PHOSPHO2Q8TCD6 241 aa12.12□□□□□ -0.47
COMMD1-203ENST00000444166 ARNTL2Q8WYA1 636 aa12.12□□□□□ -0.47
COMMD1-203ENST00000444166 RAVER2Q9HCJ3 691 aaKnown RBP12.12□□□□□ -0.47
COMMD1-203ENST00000444166 COL4A4P53420 1690 aaPredicted RBP12.11□□□□□ -0.47
COMMD1-203ENST00000444166 GOLIM4O00461 696 aa12.11□□□□□ -0.47
COMMD1-203ENST00000444166 RAD21O60216 631 aa12.11□□□□□ -0.47
COMMD1-203ENST00000444166 ZBED4O75132 1171 aa12.11□□□□□ -0.47
COMMD1-203ENST00000444166 CYP2C9P11712 490 aa12.11□□□□□ -0.47
COMMD1-203ENST00000444166 OAZ1P54368 228 aa12.11□□□□□ -0.47
COMMD1-203ENST00000444166 SLFNL1Q499Z3 407 aa12.11□□□□□ -0.47
COMMD1-203ENST00000444166 NOL8Q76FK4 1167 aaKnown RBP12.11□□□□□ -0.47
COMMD1-203ENST00000444166 HERC6Q8IVU3 1022 aa12.11□□□□□ -0.47
COMMD1-203ENST00000444166 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms