RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 STRCQ7RTU9 1775 aa22.65■■□□□ 1.22
SHOX2-203ENST00000441443 IPO7O95373 1038 aaKnown RBP22.65■■□□□ 1.22
SHOX2-203ENST00000441443 CXCR5P32302 372 aa22.65■■□□□ 1.22
SHOX2-203ENST00000441443 TDO2P48775 406 aa22.65■■□□□ 1.22
SHOX2-203ENST00000441443 PDXDC2PQ6P474 469 aa22.65■■□□□ 1.22
SHOX2-203ENST00000441443 OTUD6BQ8N6M0 293 aa22.65■■□□□ 1.22
SHOX2-203ENST00000441443 LGALS16A8MUM7 142 aa22.65■■□□□ 1.22
SHOX2-203ENST00000441443 B4DLN1 442 aa22.65■■□□□ 1.22
SHOX2-203ENST00000441443 RPN1P04843 607 aaKnown RBP22.65■■□□□ 1.22
SHOX2-203ENST00000441443 CYLC1P35663 651 aaPredicted RBP22.65■■□□□ 1.22
SHOX2-203ENST00000441443 KRT26Q7Z3Y9 468 aa22.65■■□□□ 1.22
SHOX2-203ENST00000441443 PRPF38AQ8NAV1 312 aaKnown RBP22.65■■□□□ 1.22
SHOX2-203ENST00000441443 OPA1O60313 960 aa22.64■■□□□ 1.22
SHOX2-203ENST00000441443 ATRNO75882 1429 aa22.64■■□□□ 1.22
SHOX2-203ENST00000441443 TRIM21P19474 475 aaKnown RBP22.64■■□□□ 1.22
SHOX2-203ENST00000441443 CRKLP46109 303 aaKnown RBP22.64■■□□□ 1.22
SHOX2-203ENST00000441443 PKN1Q16512 942 aa22.64■■□□□ 1.22
SHOX2-203ENST00000441443 TTC38Q5R3I4 469 aa22.64■■□□□ 1.22
SHOX2-203ENST00000441443 GPIHBP1Q8IV16 184 aa22.64■■□□□ 1.22
SHOX2-203ENST00000441443 V9GY48 417 aaPredicted RBP22.64■■□□□ 1.22
SHOX2-203ENST00000441443 GSG1L2A8MUP6 293 aa22.64■■□□□ 1.21
SHOX2-203ENST00000441443 GTPBP6O43824 516 aaPredicted RBP22.64■■□□□ 1.21
SHOX2-203ENST00000441443 KRT14P02533 472 aa22.64■■□□□ 1.21
SHOX2-203ENST00000441443 PSEN1P49768 467 aa22.64■■□□□ 1.21
SHOX2-203ENST00000441443 IQCEQ6IPM2 695 aa22.64■■□□□ 1.21
SHOX2-203ENST00000441443 BICDL1Q6ZP65 573 aa22.64■■□□□ 1.21
SHOX2-203ENST00000441443 NIP7Q9Y221 180 aaKnown RBP eCLIP22.64■■□□□ 1.21
SHOX2-203ENST00000441443 SHANK3Q9BYB0 1731 aa22.64■■□□□ 1.21
SHOX2-203ENST00000441443 KIAA0754O94854 1291 aa22.63■■□□□ 1.21
SHOX2-203ENST00000441443 ALX1Q15699 326 aa22.63■■□□□ 1.21
SHOX2-203ENST00000441443 LRWD1Q9UFC0 647 aa22.63■■□□□ 1.21
SHOX2-203ENST00000441443 XBP1P17861 261 aa22.63■■□□□ 1.21
SHOX2-203ENST00000441443 IL6STP40189 918 aaPredicted RBP22.63■■□□□ 1.21
SHOX2-203ENST00000441443 SPATA4Q8NEY3 305 aa22.63■■□□□ 1.21
SHOX2-203ENST00000441443 ZNF507Q8TCN5 953 aa22.63■■□□□ 1.21
SHOX2-203ENST00000441443 PHF20Q9BVI0 1012 aa22.63■■□□□ 1.21
SHOX2-203ENST00000441443 AKAP11Q9UKA4 1901 aa22.63■■□□□ 1.21
SHOX2-203ENST00000441443 ANO9A1A5B4 782 aa22.63■■□□□ 1.21
SHOX2-203ENST00000441443 H7C1D1 291 aa22.63■■□□□ 1.21
SHOX2-203ENST00000441443 KIF5AQ12840 1032 aa22.63■■□□□ 1.21
SHOX2-203ENST00000441443 SNX12Q9UMY4 172 aa22.63■■□□□ 1.21
SHOX2-203ENST00000441443 CAPN6Q9Y6Q1 641 aa22.63■■□□□ 1.21
SHOX2-203ENST00000441443 BCAMP50895 628 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 PUM3Q15397 648 aaKnown RBP22.62■■□□□ 1.21
SHOX2-203ENST00000441443 VGLL2Q8N8G2 317 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 CABS1Q96KC9 395 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 PCMTD1Q96MG8 357 aaPredicted RBP22.62■■□□□ 1.21
SHOX2-203ENST00000441443 ZNHIT6Q9NWK9 470 aaKnown RBP22.62■■□□□ 1.21
SHOX2-203ENST00000441443 SMIM22K7EJ46 135 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 HSF2BPO75031 334 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 MCM7P33993 719 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 FNTAP49354 379 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 MMP14P50281 582 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 PPARDQ03181 441 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 IL17AQ16552 155 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 CCDC96Q2M329 555 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 MMGT1Q8N4V1 131 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 MIGA1Q8NAN2 632 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 UBAC1Q9BSL1 405 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 MLXIPQ9HAP2 919 aa22.62■■□□□ 1.21
SHOX2-203ENST00000441443 NID2Q14112 1375 aa22.61■■□□□ 1.21
SHOX2-203ENST00000441443 PLEKP08567 350 aaPredicted RBP22.61■■□□□ 1.21
SHOX2-203ENST00000441443 RASGRF1Q13972 1273 aa22.61■■□□□ 1.21
SHOX2-203ENST00000441443 MEA1Q16626 185 aa22.61■■□□□ 1.21
SHOX2-203ENST00000441443 NFRKBQ6P4R8 1299 aa22.61■■□□□ 1.21
SHOX2-203ENST00000441443 ZIM3Q96PE6 472 aa22.61■■□□□ 1.21
SHOX2-203ENST00000441443 RNF26Q9BY78 433 aaPredicted RBP22.61■■□□□ 1.21
SHOX2-203ENST00000441443 CD248Q9HCU0 757 aa22.61■■□□□ 1.21
SHOX2-203ENST00000441443 CCDC87Q9NVE4 849 aa22.61■■□□□ 1.21
SHOX2-203ENST00000441443 KCNQ2O43526 872 aa22.61■■□□□ 1.21
SHOX2-203ENST00000441443 PLEKHA8P1O95397 391 aa22.61■■□□□ 1.21
SHOX2-203ENST00000441443 GUCY1A3Q02108 690 aa22.61■■□□□ 1.21
SHOX2-203ENST00000441443 B4GALNT4Q76KP1 1039 aa22.61■■□□□ 1.21
SHOX2-203ENST00000441443 TRIM47Q96LD4 638 aa22.61■■□□□ 1.21
SHOX2-203ENST00000441443 A0A1W2PQC6 194 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 ZNF263O14978 683 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 ATP2C1P98194 919 aaPredicted RBP22.6■■□□□ 1.21
SHOX2-203ENST00000441443 SETQ01105 290 aaPredicted RBP22.6■■□□□ 1.21
SHOX2-203ENST00000441443 LOC102724428A0A0B4J2F2 783 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 WTIPA6NIX2 430 aaPredicted RBP22.6■■□□□ 1.21
SHOX2-203ENST00000441443 RASSF10A6NK89 507 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 MEFVO15553 781 aaPredicted RBP22.6■■□□□ 1.21
SHOX2-203ENST00000441443 CCDC172P0C7W6 258 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 SIK1P57059 783 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 NNTQ13423 1086 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 LCORLQ8N3X6 602 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 SPATA5Q8NB90 893 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 LPIN2Q92539 896 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 SLC4A4Q9Y6R1 1079 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 MOCS3O95396 460 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 EPHB4P54760 987 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 SKOR1P84550 965 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 APBA1Q02410 837 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 ZNF34Q8IZ26 560 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 STAG1Q8WVM7 1258 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 ABCF2Q9UG63 623 aa22.6■■□□□ 1.21
SHOX2-203ENST00000441443 LRP6O75581 1613 aa22.59■■□□□ 1.21
SHOX2-203ENST00000441443 SLC5A1P13866 664 aa22.59■■□□□ 1.21
SHOX2-203ENST00000441443 IBSPP21815 317 aaPredicted RBP22.59■■□□□ 1.21
SHOX2-203ENST00000441443 ITPK1Q13572 414 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms