RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 ALX1Q15699 326 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 KCNA10Q16322 511 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 RCSD1Q6JBY9 416 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 TICAM2Q86XR7 235 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 KLHDC9Q8NEP7 349 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 FGD4Q96M96 766 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 TOX2Q96NM4 488 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 ACAD9Q9H845 621 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 SPC25Q9HBM1 224 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 HELLSQ9NRZ9 838 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 HOMER2Q9NSB8 354 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 STX8Q9UNK0 236 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 SYNRGQ9UMZ2 1314 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 MYH4Q9Y623 1939 aa13.78□□□□□ -0.2
UBE2D4-204ENST00000440899 DCDC2CA8MYV0 355 aa13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 KIAA0355O15063 1070 aa13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 PQBP1O60828 265 aaKnown RBP13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 PDE1AP54750 535 aa13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 CNTN2Q02246 1040 aa13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 HDAC1Q13547 482 aaPredicted RBP13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 TKFCQ3LXA3 575 aa13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 CCDC144BQ3MJ40 725 aa13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 C9orf50Q5SZB4 431 aa13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 CCSAPQ6IQ19 270 aaPredicted RBP13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 ARMCX2Q7L311 632 aa13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 ANKRD33Q7Z3H0 272 aa13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 PCSK9Q8NBP7 692 aaKnown RBP13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 CRBNQ96SW2 442 aa13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 INCENPQ9NQS7 918 aa13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 STARD7Q9NQZ5 370 aa13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 IL17RBQ9NRM6 502 aa13.77□□□□□ -0.21
UBE2D4-204ENST00000440899 ZNF536O15090 1300 aa13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 ELP1O95163 1332 aa13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 ORC4O43929 436 aa13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 RANBP6O60518 1105 aaKnown RBP13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 C6orf222P0C671 652 aaPredicted RBP13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 RAG1P15918 1043 aa13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 CST5P28325 142 aaPredicted RBP13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 VPS53Q5VIR6 699 aa13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 KCTD1Q719H9 257 aa13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 CCDC144CPQ8IYA2 1237 aa13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 FAM133AQ8N9E0 248 aa13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 CHMP4CQ96CF2 233 aa13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 AGBL1Q96MI9 1066 aa13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 TRERF1Q96PN7 1200 aa13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 UPF3AQ9H1J1 476 aaKnown RBP13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 RNF146Q9NTX7 359 aa13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 TMEM39AQ9NV64 488 aa13.76□□□□□ -0.21
UBE2D4-204ENST00000440899 CUL9Q8IWT3 2517 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 UNC80Q8N2C7 3258 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 ASB14A6NK59 587 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 DLL1O00548 723 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 NMT2O60551 498 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 FGRP09769 529 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 ALAS1P13196 640 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 ITGB8P26012 769 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 NOVP48745 357 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 GJA9P57773 515 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 FAAP100Q0VG06 881 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 MCMDC2Q4G0Z9 681 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 GNASQ5JWF2 1037 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 ZNF697Q5TEC3 545 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 GLT1D1Q96MS3 346 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 A1CFQ9NQ94 594 aaKnown RBP13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 PRR12Q9ULL5 1215 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 LTBP2Q14767 1821 aa13.75□□□□□ -0.21
UBE2D4-204ENST00000440899 MROH7Q68CQ1 1323 aa13.74□□□□□ -0.21
UBE2D4-204ENST00000440899 MYADML2A6NDP7 307 aa13.74□□□□□ -0.21
UBE2D4-204ENST00000440899 ADCY6O43306 1168 aa13.74□□□□□ -0.21
UBE2D4-204ENST00000440899 FGAP02671 866 aa13.74□□□□□ -0.21
UBE2D4-204ENST00000440899 ASGR1P07306 291 aa13.74□□□□□ -0.21
UBE2D4-204ENST00000440899 SMAD3P84022 425 aaKnown RBP13.74□□□□□ -0.21
UBE2D4-204ENST00000440899 AAMPQ13685 434 aa13.74□□□□□ -0.21
UBE2D4-204ENST00000440899 CCDC174Q6PII3 467 aa13.74□□□□□ -0.21
UBE2D4-204ENST00000440899 DCAF4Q8WV16 495 aa13.74□□□□□ -0.21
UBE2D4-204ENST00000440899 VTI1AQ96AJ9 217 aa13.74□□□□□ -0.21
UBE2D4-204ENST00000440899 FAM227BQ96M60 508 aa13.74□□□□□ -0.21
UBE2D4-204ENST00000440899 FAM161BQ96MY7 647 aa13.74□□□□□ -0.21
UBE2D4-204ENST00000440899 KATNBL1Q9H079 304 aa13.74□□□□□ -0.21
UBE2D4-204ENST00000440899 TOMM22Q9NS69 142 aa13.74□□□□□ -0.21
UBE2D4-204ENST00000440899 SOWAHBA6NEL2 793 aa13.73□□□□□ -0.21
UBE2D4-204ENST00000440899 CDK7P50613 346 aa13.73□□□□□ -0.21
UBE2D4-204ENST00000440899 SNAP25P60880 206 aa13.73□□□□□ -0.21
UBE2D4-204ENST00000440899 NKX3-2P78367 333 aa13.73□□□□□ -0.21
UBE2D4-204ENST00000440899 IRX5P78411 483 aaPredicted RBP13.73□□□□□ -0.21
UBE2D4-204ENST00000440899 TNFAIP2Q03169 654 aa13.73□□□□□ -0.21
UBE2D4-204ENST00000440899 FPGSQ05932 587 aa13.73□□□□□ -0.21
UBE2D4-204ENST00000440899 GUCD1Q96NT3 240 aa13.73□□□□□ -0.21
UBE2D4-204ENST00000440899 TCP11L1Q9NUJ3 509 aa13.73□□□□□ -0.21
UBE2D4-204ENST00000440899 MTMR7Q9Y216 660 aa13.73□□□□□ -0.21
UBE2D4-204ENST00000440899 A0A0D9SFI3 127 aa13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 A0A0U1RQG5 324 aaPredicted RBP13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 ARVCFO00192 962 aa13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 TIMP1P01033 207 aa13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 ICAM1P05362 532 aa13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 HSPD1P10809 573 aaKnown RBP13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 TOP1P11387 765 aaKnown RBP13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 EPHB4P54760 987 aa13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 CCDC96Q2M329 555 aa13.72□□□□□ -0.21
UBE2D4-204ENST00000440899 MUM1L1Q5H9M0 696 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 499.9 ms