RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 FSIP1Q8NA03 581 aa21.85■■□□□ 1.09
SNX17-203ENST00000440760 SYAP1Q96A49 352 aaPredicted RBP21.85■■□□□ 1.09
SNX17-203ENST00000440760 CLIC6Q96NY7 704 aa21.85■■□□□ 1.09
SNX17-203ENST00000440760 CCDC194A0A1B0GVG4 234 aa21.84■■□□□ 1.09
SNX17-203ENST00000440760 ESYT2A0FGR8 921 aa21.84■■□□□ 1.09
SNX17-203ENST00000440760 ADCY7P51828 1080 aa21.84■■□□□ 1.09
SNX17-203ENST00000440760 ZNF174Q15697 407 aa21.84■■□□□ 1.09
SNX17-203ENST00000440760 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.84■■□□□ 1.09
SNX17-203ENST00000440760 PICK1Q9NRD5 415 aa21.84■■□□□ 1.09
SNX17-203ENST00000440760 BIN2Q9UBW5 565 aaPredicted RBP21.84■■□□□ 1.09
SNX17-203ENST00000440760 WDR90Q96KV7 1748 aa21.83■■□□□ 1.09
SNX17-203ENST00000440760 POTECB2RU33 542 aa21.83■■□□□ 1.09
SNX17-203ENST00000440760 PPP6R2O75170 966 aa21.83■■□□□ 1.09
SNX17-203ENST00000440760 PTPRAP18433 802 aa21.83■■□□□ 1.09
SNX17-203ENST00000440760 GNA11P29992 359 aa21.83■■□□□ 1.09
SNX17-203ENST00000440760 GRIN1Q05586 938 aa21.83■■□□□ 1.09
SNX17-203ENST00000440760 UBE2SQ16763 222 aa21.83■■□□□ 1.09
SNX17-203ENST00000440760 INF2Q27J81 1249 aa21.83■■□□□ 1.09
SNX17-203ENST00000440760 USH1GQ495M9 461 aa21.83■■□□□ 1.09
SNX17-203ENST00000440760 JAKMIP3Q5VZ66 844 aa21.83■■□□□ 1.09
SNX17-203ENST00000440760 ADALQ6DHV7 355 aa21.83■■□□□ 1.09
SNX17-203ENST00000440760 FAM177A1Q8N128 213 aaPredicted RBP21.83■■□□□ 1.09
SNX17-203ENST00000440760 KIFC2Q96AC6 838 aa21.83■■□□□ 1.09
SNX17-203ENST00000440760 TAF1DQ9H5J8 278 aaPredicted RBP21.83■■□□□ 1.09
SNX17-203ENST00000440760 GINM1Q9NU53 330 aa21.83■■□□□ 1.09
SNX17-203ENST00000440760 A0A1B0GVL5 298 aa21.83■■□□□ 1.08
SNX17-203ENST00000440760 SPP2Q13103 211 aa21.83■■□□□ 1.08
SNX17-203ENST00000440760 PPP1R18Q6NYC8 613 aa21.83■■□□□ 1.08
SNX17-203ENST00000440760 GAS2L3Q86XJ1 694 aa21.83■■□□□ 1.08
SNX17-203ENST00000440760 REXO1Q8N1G1 1221 aaKnown RBP21.83■■□□□ 1.08
SNX17-203ENST00000440760 MRPS27Q92552 414 aaKnown RBP21.83■■□□□ 1.08
SNX17-203ENST00000440760 KIAA1683Q9H0B3 1180 aa21.83■■□□□ 1.08
SNX17-203ENST00000440760 PCDHA1Q9Y5I3 950 aa21.83■■□□□ 1.08
SNX17-203ENST00000440760 USP2O75604 605 aaPredicted RBP21.82■■□□□ 1.08
SNX17-203ENST00000440760 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.82■■□□□ 1.089e-8■■□□□ 11.5
SNX17-203ENST00000440760 MCM7P33993 719 aa21.81■■□□□ 1.08
SNX17-203ENST00000440760 DEKP35659 375 aaKnown RBP21.81■■□□□ 1.08
SNX17-203ENST00000440760 JMYQ8N9B5 988 aa21.81■■□□□ 1.08
SNX17-203ENST00000440760 FBXO2Q9UK22 296 aaPredicted RBP21.81■■□□□ 1.08
SNX17-203ENST00000440760 A0A1W2PQ27 194 aa21.81■■□□□ 1.08
SNX17-203ENST00000440760 A0A1W2PQ64 194 aa21.81■■□□□ 1.08
SNX17-203ENST00000440760 A0A1W2PQD8 194 aa21.81■■□□□ 1.08
SNX17-203ENST00000440760 POTEIP0CG38 1075 aa21.81■■□□□ 1.08
SNX17-203ENST00000440760 POTEJP0CG39 1038 aa21.81■■□□□ 1.08
SNX17-203ENST00000440760 ZNF445P59923 1031 aa21.81■■□□□ 1.08
SNX17-203ENST00000440760 CAMK4Q16566 473 aa21.81■■□□□ 1.08
SNX17-203ENST00000440760 CCDC73Q6ZRK6 1079 aa21.81■■□□□ 1.08
SNX17-203ENST00000440760 RIC8AQ9NPQ8 531 aa21.81■■□□□ 1.08
SNX17-203ENST00000440760 ZHX2Q9Y6X8 837 aa21.81■■□□□ 1.08
SNX17-203ENST00000440760 NDUFA8P51970 172 aa21.8■■□□□ 1.08
SNX17-203ENST00000440760 SPECC1Q5M775 1068 aa21.8■■□□□ 1.08
SNX17-203ENST00000440760 CCDC174Q6PII3 467 aa21.8■■□□□ 1.08
SNX17-203ENST00000440760 SHC4Q6S5L8 630 aa21.8■■□□□ 1.08
SNX17-203ENST00000440760 FBXO11Q86XK2 927 aa21.8■■□□□ 1.08
SNX17-203ENST00000440760 CDCA5Q96FF9 252 aa21.8■■□□□ 1.08
SNX17-203ENST00000440760 AMNQ9BXJ7 453 aa21.8■■□□□ 1.08
SNX17-203ENST00000440760 EMILIN3Q9NT22 766 aa21.8■■□□□ 1.08
SNX17-203ENST00000440760 CEP131Q9UPN4 1083 aa21.8■■□□□ 1.08
SNX17-203ENST00000440760 VCAM1P19320 739 aa21.79■■□□□ 1.08
SNX17-203ENST00000440760 TRAPPC10P48553 1259 aa21.79■■□□□ 1.08
SNX17-203ENST00000440760 SNW1Q13573 536 aaKnown RBP21.79■■□□□ 1.08
SNX17-203ENST00000440760 VGLL4Q14135 290 aa21.79■■□□□ 1.08
SNX17-203ENST00000440760 KRT25Q7Z3Z0 450 aa21.79■■□□□ 1.08
SNX17-203ENST00000440760 KRI1Q8N9T8 703 aaKnown RBP21.79■■□□□ 1.08
SNX17-203ENST00000440760 NUP62CLQ9H1M0 184 aa21.79■■□□□ 1.08
SNX17-203ENST00000440760 PARP14Q460N5 1801 aa21.79■■□□□ 1.08
SNX17-203ENST00000440760 IQCA1LA6NCM1 817 aa21.79■■□□□ 1.08
SNX17-203ENST00000440760 WDR46O15213 610 aaKnown RBP21.79■■□□□ 1.08
SNX17-203ENST00000440760 NONOQ15233 471 aaKnown RBP eCLIP21.79■■□□□ 1.08
SNX17-203ENST00000440760 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.79■■□□□ 1.08
SNX17-203ENST00000440760 MOB2Q70IA6 237 aa21.79■■□□□ 1.08
SNX17-203ENST00000440760 ZNF280CQ8ND82 737 aa21.79■■□□□ 1.08
SNX17-203ENST00000440760 ENGASEQ8NFI3 743 aa21.79■■□□□ 1.08
SNX17-203ENST00000440760 CUL5Q93034 780 aa21.79■■□□□ 1.08
SNX17-203ENST00000440760 TANGO6Q9C0B7 1094 aa21.79■■□□□ 1.08
SNX17-203ENST00000440760 FEM1BQ9UK73 627 aa21.79■■□□□ 1.08
SNX17-203ENST00000440760 SNCAIPQ9Y6H5 919 aa21.79■■□□□ 1.08
SNX17-203ENST00000440760 SOCS7O14512 581 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 PFKFB1P16118 471 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 FAM160A1Q05DH4 1040 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 PTGDRQ13258 359 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 NOL9Q5SY16 702 aaKnown RBP21.78■■□□□ 1.08
SNX17-203ENST00000440760 ZC3H15Q8WU90 426 aaKnown RBP21.78■■□□□ 1.08
SNX17-203ENST00000440760 CHURC1Q8WUH1 139 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 LPAR1Q92633 364 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 WDR18Q9BV38 432 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 PSTPIP2Q9H939 334 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 AS3MTQ9HBK9 375 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 DDX19AQ9NUU7 478 aaKnown RBP21.78■■□□□ 1.08
SNX17-203ENST00000440760 MYH7BA7E2Y1 1941 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 USP17L15C9J2P7 530 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 USP17L13C9JLJ4 530 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 USP17L11C9JVI0 530 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 USP17L18D6R9N7 530 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 USP17L22D6RA61 530 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 USP17L17D6RBQ6 530 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 USP17L19D6RCP7 530 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 USP17L20D6RJB6 530 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 CUTAO60888 179 aa21.78■■□□□ 1.08
SNX17-203ENST00000440760 PTPREP23469 700 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms