RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 FKTNO75072 461 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 USP2O75604 605 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 C1QTNF9P0C862 333 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 ITGA4P13612 1032 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 PNLIPP16233 465 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 GUCY2CP25092 1073 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 NOP2P46087 812 aaKnown RBP4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 RTP1P59025 263 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 TCEAL1Q15170 157 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 NOL9Q5SY16 702 aaKnown RBP4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 ADGRF1Q5T601 910 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 CYP2R1Q6VVX0 501 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 NLRX1Q86UT6 975 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 C7orf61Q8IZ16 206 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 USHBP1Q8N6Y0 703 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 RBBP8NLQ8NC74 664 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 CDADC1Q9BWV3 514 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 CD320Q9NPF0 282 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 GFOD1Q9NXC2 390 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 PDS5BQ9NTI5 1447 aa4.95□□□□□ -1.62
HMGB3P11-201ENST00000440127 POLA1P09884 1462 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 RAD54L2Q9Y4B4 1467 aa4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 ABCA10Q8WWZ4 1543 aa4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 A0A1W2PQ45 241 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 A0A1W2PQY0 241 aa4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 NPIPB6E9PJ23 425 aa4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 NUAK1O60285 661 aa4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 ZNF205O95201 554 aa4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 MPOP05164 745 aa4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 ZNF385BQ569K4 471 aa4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 TMEM192Q8IY95 271 aa4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 ZNF512BQ96KM6 892 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 SLC9A7Q96T83 725 aa4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 G6PC3Q9BUM1 346 aa4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 GBP3Q9H0R5 595 aa4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 ZNF552Q9H707 407 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 SP110Q9HB58 689 aa4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 SIRT5Q9NXA8 310 aa4.94□□□□□ -1.62
HMGB3P11-201ENST00000440127 TMEM82A0PJX8 343 aa4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 ETV2O00321 342 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 ZSCAN22P10073 491 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 NAT2P11245 290 aa4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 LINC00310P59036 64 aa4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 DLG4P78352 724 aa4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 ZNF394Q53GI3 561 aa4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 HLA-DQA1Q5Y7H0 255 aa4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 JAMLQ86YT9 394 aa4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 C19orf47Q8N9M1 422 aaKnown RBP4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 HHIPL1Q96JK4 782 aa4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 PHAXQ9H814 394 aaKnown RBP4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 DDX41Q9UJV9 622 aaKnown RBP4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 SMG5Q9UPR3 1016 aaKnown RBP4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 FHOD1Q9Y613 1164 aa4.93□□□□□ -1.62
HMGB3P11-201ENST00000440127 URB2Q14146 1524 aaKnown RBP4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 A0A1W2PQJ5 194 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 MEIS1O00470 390 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 PSPNO60542 156 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 VAV1P15498 845 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 CFPP27918 469 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 EIF6P56537 245 aaKnown RBP4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 POU4F1Q01851 419 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 SNW1Q13573 536 aaKnown RBP4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 TIGD5Q53EQ6 642 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 ANKRD39Q53RE8 183 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 SPOCD1Q6ZMY3 1216 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 GPRASP2Q96D09 838 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 MCOLN1Q9GZU1 580 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 ANTXR1Q9H6X2 564 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 RAPGEFL1Q9UHV5 662 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 CNOT6Q9ULM6 557 aaKnown RBP4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 STRIP2Q9ULQ0 834 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 GPR55Q9Y2T6 319 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 PCDHGB7Q9Y5F8 929 aa4.92□□□□□ -1.62
HMGB3P11-201ENST00000440127 FHAD1B1AJZ9 1412 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 A0A087WZG4 1122 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 FADS2P1A8MWK0 482 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 TBC1D8O95759 1140 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 RECKO95980 971 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 TCF3P15923 654 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 ERVFRD-1P60508 538 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 SRSF3P84103 164 aaKnown RBP4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 HSF5Q4G112 596 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 TCERG1LQ5VWI1 586 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 CRTC3Q6UUV7 619 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 AMIGO3Q86WK7 504 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 CRACR2BQ8N4Y2 399 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 CPLX3Q8WVH0 158 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 ERVK13-1Q9NX77 482 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 WHRNQ9P202 907 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 IRAK3Q9Y616 596 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 MAP3K1Q13233 1512 aa4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 TDRD9Q8NDG6 1382 aaKnown RBP4.91□□□□□ -1.62
HMGB3P11-201ENST00000440127 RRBP1Q9P2E9 1410 aaKnown RBP4.9□□□□□ -1.62
HMGB3P11-201ENST00000440127 FAM86C2PA6NEL3 165 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 SOX9P48436 509 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 CORO7P57737 925 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 CYP4F8P98187 520 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 PAK2Q13177 524 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 NR1I3Q14994 352 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 LDLRAD1Q5T700 205 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms