RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 NT5C2P49902 561 aa17.14■□□□□ 0.33
CPSF7-205ENST00000439958 DPCR1Q3MIW9 517 aa17.14■□□□□ 0.33
CPSF7-205ENST00000439958 RESP18Q5W5W9 173 aa17.14■□□□□ 0.33
CPSF7-205ENST00000439958 CEP57L1Q8IYX8 460 aa17.14■□□□□ 0.33
CPSF7-205ENST00000439958 AOPEPQ8N6M6 819 aa17.14■□□□□ 0.33
CPSF7-205ENST00000439958 PSTPIP2Q9H939 334 aa17.14■□□□□ 0.33
CPSF7-205ENST00000439958 KIAA1468Q9P260 1216 aa17.14■□□□□ 0.33
CPSF7-205ENST00000439958 HERC5Q9UII4 1024 aaKnown RBP17.14■□□□□ 0.33
CPSF7-205ENST00000439958 ZBTB21Q9ULJ3 1066 aa17.14■□□□□ 0.33
CPSF7-205ENST00000439958 PRELPP51888 382 aa17.13■□□□□ 0.33
CPSF7-205ENST00000439958 DGKZQ13574 1117 aa17.13■□□□□ 0.33
CPSF7-205ENST00000439958 ANGEL2Q5VTE6 544 aaKnown RBP17.13■□□□□ 0.33
CPSF7-205ENST00000439958 FCHSD1Q86WN1 690 aa17.13■□□□□ 0.33
CPSF7-205ENST00000439958 DEFB129Q9H1M3 183 aa17.13■□□□□ 0.33
CPSF7-205ENST00000439958 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.13■□□□□ 0.33
CPSF7-205ENST00000439958 RNF181Q9P0P0 153 aa17.13■□□□□ 0.33
CPSF7-205ENST00000439958 IGKV6D-41A0A0C4DH26 115 aa17.13■□□□□ 0.33
CPSF7-205ENST00000439958 ZNF341Q9BYN7 854 aa17.13■□□□□ 0.33
CPSF7-205ENST00000439958 SRPRBQ9Y5M8 271 aaKnown RBP17.13■□□□□ 0.33
CPSF7-205ENST00000439958 PNMA6FA0A0J9YX94 578 aa17.13■□□□□ 0.33
CPSF7-205ENST00000439958 TXKP42681 527 aa17.13■□□□□ 0.33
CPSF7-205ENST00000439958 KLHL10Q6JEL2 608 aa17.13■□□□□ 0.33
CPSF7-205ENST00000439958 TATDN1Q6P1N9 297 aa17.13■□□□□ 0.33
CPSF7-205ENST00000439958 DLK2Q6UY11 383 aa17.13■□□□□ 0.33
CPSF7-205ENST00000439958 TNFAIP1Q13829 316 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 DTHD1Q6ZMT9 781 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 FUCA2Q9BTY2 467 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 NYAP2Q9P242 653 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 ZBTB5O15062 677 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 PPP4R3BQ5MIZ7 849 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 GJA10Q969M2 543 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 TMEM60Q9H2L4 133 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 SH3GLB2Q9NR46 395 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 HOOK1Q9UJC3 728 aaKnown RBP17.12■□□□□ 0.33
CPSF7-205ENST00000439958 CDK5RAP2Q96SN8 1893 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 DDNO94850 711 aaPredicted RBP17.12■□□□□ 0.33
CPSF7-205ENST00000439958 HOXA13P31271 388 aaPredicted RBP17.12■□□□□ 0.33
CPSF7-205ENST00000439958 TXLNAP40222 546 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 UBA7P41226 1012 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 NBPF12Q5TAG4 269 aaPredicted RBP17.12■□□□□ 0.33
CPSF7-205ENST00000439958 SIAH1Q8IUQ4 282 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 CPXCR1Q8N123 301 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 RIOX1Q9H6W3 641 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 FBXO28Q9NVF7 368 aa17.12■□□□□ 0.33
CPSF7-205ENST00000439958 EPS15P42566 896 aa17.11■□□□□ 0.33
CPSF7-205ENST00000439958 KRBA2Q6ZNG9 492 aa17.11■□□□□ 0.33
CPSF7-205ENST00000439958 ZFP91Q96JP5 570 aaPredicted RBP17.11■□□□□ 0.33
CPSF7-205ENST00000439958 ZNF830Q96NB3 372 aaPredicted RBP17.11■□□□□ 0.33
CPSF7-205ENST00000439958 SGIP1Q9BQI5 828 aa17.11■□□□□ 0.33
CPSF7-205ENST00000439958 BLZF1Q9H2G9 400 aa17.11■□□□□ 0.33
CPSF7-205ENST00000439958 PPP1R11O60927 126 aaPredicted RBP17.11■□□□□ 0.33
CPSF7-205ENST00000439958 KARSQ15046 597 aaKnown RBP17.11■□□□□ 0.33
CPSF7-205ENST00000439958 KRT25Q7Z3Z0 450 aa17.11■□□□□ 0.33
CPSF7-205ENST00000439958 CUL5Q93034 780 aa17.11■□□□□ 0.33
CPSF7-205ENST00000439958 TNFRSF25Q93038 417 aa17.11■□□□□ 0.33
CPSF7-205ENST00000439958 ZMYND12Q9H0C1 365 aa17.11■□□□□ 0.33
CPSF7-205ENST00000439958 HOMER2Q9NSB8 354 aa17.11■□□□□ 0.33
CPSF7-205ENST00000439958 GGA3Q9NZ52 723 aa17.11■□□□□ 0.33
CPSF7-205ENST00000439958 CNTNAP1P78357 1384 aa17.11■□□□□ 0.33
CPSF7-205ENST00000439958 TECP42680 631 aa17.1■□□□□ 0.33
CPSF7-205ENST00000439958 NEK8Q86SG6 692 aa17.1■□□□□ 0.33
CPSF7-205ENST00000439958 TANGO6Q9C0B7 1094 aa17.1■□□□□ 0.33
CPSF7-205ENST00000439958 NAT10Q9H0A0 1025 aaKnown RBP17.1■□□□□ 0.33
CPSF7-205ENST00000439958 PCDHA5Q9Y5H7 936 aa17.1■□□□□ 0.33
CPSF7-205ENST00000439958 NEMFO60524 1076 aa17.1■□□□□ 0.33
CPSF7-205ENST00000439958 BMP15O95972 392 aa17.1■□□□□ 0.33
CPSF7-205ENST00000439958 MRPL12P52815 198 aaKnown RBP17.1■□□□□ 0.33
CPSF7-205ENST00000439958 TRPM4Q8TD43 1214 aa17.1■□□□□ 0.33
CPSF7-205ENST00000439958 CCDC34Q96HJ3 373 aa17.1■□□□□ 0.33
CPSF7-205ENST00000439958 CTDP1Q9Y5B0 961 aaPredicted RBP17.1■□□□□ 0.33
CPSF7-205ENST00000439958 CFBP00751 764 aa17.1■□□□□ 0.33
CPSF7-205ENST00000439958 PRR29P0C7W0 189 aa17.1■□□□□ 0.33
CPSF7-205ENST00000439958 INPP5BP32019 993 aa17.1■□□□□ 0.33
CPSF7-205ENST00000439958 SYDE2Q5VT97 1194 aa17.1■□□□□ 0.33
CPSF7-205ENST00000439958 GOPCQ9HD26 462 aa17.1■□□□□ 0.33
CPSF7-205ENST00000439958 TDP2O95551 362 aa17.09■□□□□ 0.33
CPSF7-205ENST00000439958 STAT2P52630 851 aa17.09■□□□□ 0.33
CPSF7-205ENST00000439958 UBXN2AP68543 259 aa17.09■□□□□ 0.33
CPSF7-205ENST00000439958 FBXO11Q86XK2 927 aa17.09■□□□□ 0.33
CPSF7-205ENST00000439958 ZKSCAN4Q969J2 545 aaPredicted RBP17.09■□□□□ 0.33
CPSF7-205ENST00000439958 FERMT2Q96AC1 680 aa17.09■□□□□ 0.33
CPSF7-205ENST00000439958 POSTNQ15063 836 aa17.09■□□□□ 0.33
CPSF7-205ENST00000439958 METTL16Q86W50 562 aaKnown RBP17.09■□□□□ 0.33
CPSF7-205ENST00000439958 DCAF4Q8WV16 495 aa17.09■□□□□ 0.33
CPSF7-205ENST00000439958 SMARCE1Q969G3 411 aa17.09■□□□□ 0.33
CPSF7-205ENST00000439958 VPS33BQ9H267 617 aa17.09■□□□□ 0.33
CPSF7-205ENST00000439958 PLIN4Q96Q06 1357 aa17.09■□□□□ 0.33
CPSF7-205ENST00000439958 MYH8P13535 1937 aa17.08■□□□□ 0.33
CPSF7-205ENST00000439958 CAP2P40123 477 aa17.08■□□□□ 0.33
CPSF7-205ENST00000439958 ATP2C1P98194 919 aaPredicted RBP17.08■□□□□ 0.33
CPSF7-205ENST00000439958 POTEDQ86YR6 584 aa17.08■□□□□ 0.33
CPSF7-205ENST00000439958 WRNIP1Q96S55 665 aa17.08■□□□□ 0.33
CPSF7-205ENST00000439958 ASNSP08243 561 aa17.08■□□□□ 0.32
CPSF7-205ENST00000439958 SNHG28P0DPA3 235 aa17.08■□□□□ 0.32
CPSF7-205ENST00000439958 LMNB1P20700 586 aa17.08■□□□□ 0.32
CPSF7-205ENST00000439958 LMOD1P29536 600 aaPredicted RBP17.08■□□□□ 0.32
CPSF7-205ENST00000439958 STAT6P42226 847 aa17.08■□□□□ 0.32
CPSF7-205ENST00000439958 KIAA1755Q5JYT7 1200 aa17.08■□□□□ 0.32
CPSF7-205ENST00000439958 A0A087X0B3 334 aa17.08■□□□□ 0.32
CPSF7-205ENST00000439958 COBLO75128 1261 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms