RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 HHIPL1Q96JK4 782 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 FCRL2Q96LA5 508 aaPredicted RBP5.4□□□□□ -1.54
VPS41-207ENST00000439468 G6PC3Q9BUM1 346 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 PIF1Q9H611 641 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 ST7Q9NRC1 585 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 AP5S1Q9NUS5 200 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 GPR55Q9Y2T6 319 aaPredicted RBP5.4□□□□□ -1.54
VPS41-207ENST00000439468 YBX2Q9Y2T7 364 aaKnown RBP5.4□□□□□ -1.54
VPS41-207ENST00000439468 SLC12A7Q9Y666 1083 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 TAF6LQ9Y6J9 622 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 TCAF2A6NFQ2 919 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 KLF4O43474 513 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 ZNF205O95201 554 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 GSTM1P09488 218 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 ITGA4P13612 1032 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 VAV1P15498 845 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 BMP8BP34820 402 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 TCEAL1Q15170 157 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 CCDC144BQ3MJ40 725 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 ANKLE2Q86XL3 938 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 IRF2BP1Q8IU81 584 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 FIBCD1Q8N539 461 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 CELF2-AS1Q8N7Q2 184 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 BHLHE22Q8NFJ8 381 aaPredicted RBP5.39□□□□□ -1.55
VPS41-207ENST00000439468 MICAL1Q8TDZ2 1067 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 SLC26A8Q96RN1 970 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 GP6Q9HCN6 339 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 PRR13Q9NZ81 148 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 PRKAG3Q9UGI9 489 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 STRIP2Q9ULQ0 834 aa5.39□□□□□ -1.55
VPS41-207ENST00000439468 A0A1W2PQ27 194 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 A0A1W2PQ64 194 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 A0A1W2PQC6 194 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 A0A1W2PQD8 194 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 OR14I1A6ND48 311 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 H0Y8X5 98 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 SHOXO15266 292 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 NRDCO43847 1150 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 TSPAN15O95858 294 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 C1QTNF9P0C862 333 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 PPP2R5DQ14738 602 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 ADAT2Q7Z6V5 191 aaKnown RBP5.38□□□□□ -1.55
VPS41-207ENST00000439468 ADCY4Q8NFM4 1077 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 OR6P1Q8NGX9 317 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 KCNN1Q92952 543 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 ARMC5Q96C12 935 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 ZDHHC15Q96MV8 337 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 TOX2Q96NM4 488 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 NOL6Q9H6R4 1146 aaKnown RBP5.38□□□□□ -1.55
VPS41-207ENST00000439468 TNFRSF10DQ9UBN6 386 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 ZNF214Q9UL59 606 aaPredicted RBP5.38□□□□□ -1.55
VPS41-207ENST00000439468 PCDHB10Q9UN67 800 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 SF3B6Q9Y3B4 125 aaKnown RBP5.38□□□□□ -1.55
VPS41-207ENST00000439468 ZNF451Q9Y4E5 1061 aa5.38□□□□□ -1.55
VPS41-207ENST00000439468 CD3EP07766 207 aa5.37□□□□□ -1.55
VPS41-207ENST00000439468 CD247P20963 164 aa5.37□□□□□ -1.55
VPS41-207ENST00000439468 ZNF445P59923 1031 aa5.37□□□□□ -1.55
VPS41-207ENST00000439468 SLC7A5Q01650 507 aa5.37□□□□□ -1.55
VPS41-207ENST00000439468 HEATR6Q6AI08 1181 aaKnown RBP5.37□□□□□ -1.55
VPS41-207ENST00000439468 GALNT18Q6P9A2 607 aa5.37□□□□□ -1.55
VPS41-207ENST00000439468 ATG14Q6ZNE5 492 aa5.37□□□□□ -1.55
VPS41-207ENST00000439468 NLRX1Q86UT6 975 aa5.37□□□□□ -1.55
VPS41-207ENST00000439468 JAMLQ86YT9 394 aa5.37□□□□□ -1.55
VPS41-207ENST00000439468 CKAP2LQ8IYA6 745 aa5.37□□□□□ -1.55
VPS41-207ENST00000439468 HIRIP3Q9BW71 556 aaPredicted RBP5.37□□□□□ -1.55
VPS41-207ENST00000439468 GBP3Q9H0R5 595 aa5.37□□□□□ -1.55
VPS41-207ENST00000439468 PHAXQ9H814 394 aaKnown RBP5.37□□□□□ -1.55
VPS41-207ENST00000439468 ERVK13-1Q9NX77 482 aa5.37□□□□□ -1.55
VPS41-207ENST00000439468 ZNF281Q9Y2X9 895 aa5.37□□□□□ -1.55
VPS41-207ENST00000439468 FHOD1Q9Y613 1164 aa5.37□□□□□ -1.55
VPS41-207ENST00000439468 LTBP3Q9NS15 1303 aa5.37□□□□□ -1.55
VPS41-207ENST00000439468 A0A1W2PQH9 124 aa5.36□□□□□ -1.55
VPS41-207ENST00000439468 WTIPA6NIX2 430 aaPredicted RBP5.36□□□□□ -1.55
VPS41-207ENST00000439468 CCDC85CA6NKD9 419 aa5.36□□□□□ -1.55
VPS41-207ENST00000439468 NPIPB6E9PJ23 425 aa5.36□□□□□ -1.55
VPS41-207ENST00000439468 ETV2O00321 342 aaPredicted RBP5.36□□□□□ -1.55
VPS41-207ENST00000439468 SDHBP21912 280 aa5.36□□□□□ -1.55
VPS41-207ENST00000439468 ARL4AP40617 200 aa5.36□□□□□ -1.55
VPS41-207ENST00000439468 NOP2P46087 812 aaKnown RBP5.36□□□□□ -1.55
VPS41-207ENST00000439468 RAB33AQ14088 237 aa5.36□□□□□ -1.55
VPS41-207ENST00000439468 BMS1Q14692 1282 aaKnown RBP5.36□□□□□ -1.55
VPS41-207ENST00000439468 HSF5Q4G112 596 aaPredicted RBP5.36□□□□□ -1.55
VPS41-207ENST00000439468 ANKRD39Q53RE8 183 aa5.36□□□□□ -1.55
VPS41-207ENST00000439468 LARP1BQ659C4 914 aaKnown RBP5.36□□□□□ -1.55
VPS41-207ENST00000439468 GIMAP6Q6P9H5 292 aa5.36□□□□□ -1.55
VPS41-207ENST00000439468 NUP43Q8NFH3 380 aa5.36□□□□□ -1.55
VPS41-207ENST00000439468 SHISA4Q96DD7 197 aa5.36□□□□□ -1.55
VPS41-207ENST00000439468 HAUS7Q99871 368 aa5.36□□□□□ -1.55
VPS41-207ENST00000439468 PLCD4Q9BRC7 762 aa5.36□□□□□ -1.55
VPS41-207ENST00000439468 ZSWIM4Q9H7M6 989 aa5.36□□□□□ -1.55
VPS41-207ENST00000439468 SUGT1Q9Y2Z0 365 aa5.36□□□□□ -1.55
VPS41-207ENST00000439468 SHROOM4Q9ULL8 1493 aa5.35□□□□□ -1.55
VPS41-207ENST00000439468 NOTOA8MTQ0 251 aa5.35□□□□□ -1.55
VPS41-207ENST00000439468 FADS2P1A8MWK0 482 aa5.35□□□□□ -1.55
VPS41-207ENST00000439468 B2RBV5 119 aa5.35□□□□□ -1.55
VPS41-207ENST00000439468 EFEMP2O95967 443 aa5.35□□□□□ -1.55
VPS41-207ENST00000439468 PRKCAP17252 672 aa5.35□□□□□ -1.55
VPS41-207ENST00000439468 POU4F1Q01851 419 aa5.35□□□□□ -1.55
VPS41-207ENST00000439468 KIR3DS1Q14943 382 aa5.35□□□□□ -1.55
VPS41-207ENST00000439468 RTP2Q5QGT7 225 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms