RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 SH3RF1Q7Z6J0 888 aa16.01■□□□□ 0.15
GARNL3-206ENST00000439286 TRIM43Q96BQ3 446 aaPredicted RBP16.01■□□□□ 0.15
GARNL3-206ENST00000439286 LENG1Q96BZ8 264 aaPredicted RBP16.01■□□□□ 0.15
GARNL3-206ENST00000439286 MTMR7Q9Y216 660 aa16.01■□□□□ 0.15
GARNL3-206ENST00000439286 ASB14A6NK59 587 aa16■□□□□ 0.15
GARNL3-206ENST00000439286 TRIM6-TRIM34B2RNG4 842 aa16■□□□□ 0.15
GARNL3-206ENST00000439286 ALAS1P13196 640 aa16■□□□□ 0.15
GARNL3-206ENST00000439286 PDE1AP54750 535 aa16■□□□□ 0.15
GARNL3-206ENST00000439286 AAMPQ13685 434 aa16■□□□□ 0.15
GARNL3-206ENST00000439286 CCDC96Q2M329 555 aa16■□□□□ 0.15
GARNL3-206ENST00000439286 CCDC144BQ3MJ40 725 aa16■□□□□ 0.15
GARNL3-206ENST00000439286 RRP12Q5JTH9 1297 aaKnown RBP16■□□□□ 0.15
GARNL3-206ENST00000439286 CCDC174Q6PII3 467 aa16■□□□□ 0.15
GARNL3-206ENST00000439286 KCTD1Q719H9 257 aa16■□□□□ 0.15
GARNL3-206ENST00000439286 TICAM2Q86XR7 235 aa16■□□□□ 0.15
GARNL3-206ENST00000439286 AGBL1Q96MI9 1066 aa16■□□□□ 0.15
GARNL3-206ENST00000439286 TRERF1Q96PN7 1200 aa16■□□□□ 0.15
GARNL3-206ENST00000439286 RNF146Q9NTX7 359 aa16■□□□□ 0.15
GARNL3-206ENST00000439286 ANAPC4Q9UJX5 808 aa16■□□□□ 0.15
GARNL3-206ENST00000439286 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16■□□□□ 0.15
GARNL3-206ENST00000439286 A0A0G2JMZ2 1700 aa15.99■□□□□ 0.15
GARNL3-206ENST00000439286 MROH7Q68CQ1 1323 aa15.99■□□□□ 0.15
GARNL3-206ENST00000439286 KIAA0355O15063 1070 aa15.99■□□□□ 0.15
GARNL3-206ENST00000439286 ALX1Q15699 326 aa15.99■□□□□ 0.15
GARNL3-206ENST00000439286 GNASQ5JWF2 1037 aa15.99■□□□□ 0.15
GARNL3-206ENST00000439286 CCDC144CPQ8IYA2 1237 aa15.99■□□□□ 0.15
GARNL3-206ENST00000439286 KLHDC9Q8NEP7 349 aa15.99■□□□□ 0.15
GARNL3-206ENST00000439286 TOX2Q96NM4 488 aa15.99■□□□□ 0.15
GARNL3-206ENST00000439286 RWDD1Q9H446 243 aaPredicted RBP15.99■□□□□ 0.15
GARNL3-206ENST00000439286 INCENPQ9NQS7 918 aa15.99■□□□□ 0.15
GARNL3-206ENST00000439286 ELP1O95163 1332 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 DLL1O00548 723 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 ORC4O43929 436 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 CST5P28325 142 aaPredicted RBP15.98■□□□□ 0.15
GARNL3-206ENST00000439286 MFAP1P55081 439 aaKnown RBP15.98■□□□□ 0.15
GARNL3-206ENST00000439286 CNTN2Q02246 1040 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 TNFAIP2Q03169 654 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 FPGSQ05932 587 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 C9orf50Q5SZB4 431 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 VPS53Q5VIR6 699 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 ANKRD33Q7Z3H0 272 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 DCAF4Q8WV16 495 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 RILPL2Q969X0 211 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 FAM161BQ96MY7 647 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 IL17RBQ9NRM6 502 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 CCPG1Q9ULG6 757 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 PRR12Q9ULL5 1215 aa15.98■□□□□ 0.15
GARNL3-206ENST00000439286 RANBP2P49792 3224 aaKnown RBP15.98■□□□□ 0.15
GARNL3-206ENST00000439286 SALL3Q9BXA9 1300 aa15.97■□□□□ 0.15
GARNL3-206ENST00000439286 TLR3O15455 904 aaKnown RBP15.97■□□□□ 0.15
GARNL3-206ENST00000439286 ZEB2O60315 1214 aa15.97■□□□□ 0.15
GARNL3-206ENST00000439286 NMT2O60551 498 aa15.97■□□□□ 0.15
GARNL3-206ENST00000439286 FGAP02671 866 aa15.97■□□□□ 0.15
GARNL3-206ENST00000439286 ASGR1P07306 291 aa15.97■□□□□ 0.15
GARNL3-206ENST00000439286 GJA9P57773 515 aa15.97■□□□□ 0.15
GARNL3-206ENST00000439286 FAM133AQ8N9E0 248 aa15.97■□□□□ 0.15
GARNL3-206ENST00000439286 RNPC3Q96LT9 517 aaKnown RBP15.97■□□□□ 0.15
GARNL3-206ENST00000439286 AP5M1Q9H0R1 490 aa15.97■□□□□ 0.15
GARNL3-206ENST00000439286 A1CFQ9NQ94 594 aaKnown RBP15.97■□□□□ 0.15
GARNL3-206ENST00000439286 PNMA2Q9UL42 364 aa15.97■□□□□ 0.15
GARNL3-206ENST00000439286 BAZ2AQ9UIF9 1905 aaKnown RBP15.97■□□□□ 0.15
GARNL3-206ENST00000439286 A0A0U1RQG5 324 aaPredicted RBP15.96■□□□□ 0.15
GARNL3-206ENST00000439286 TOP1P11387 765 aaKnown RBP15.96■□□□□ 0.15
GARNL3-206ENST00000439286 SNAP25P60880 206 aa15.96■□□□□ 0.15
GARNL3-206ENST00000439286 SMAD3P84022 425 aaKnown RBP15.96■□□□□ 0.15
GARNL3-206ENST00000439286 FAAP100Q0VG06 881 aa15.96■□□□□ 0.15
GARNL3-206ENST00000439286 NSMFQ6X4W1 530 aa15.96■□□□□ 0.15
GARNL3-206ENST00000439286 FAM227BQ96M60 508 aa15.96■□□□□ 0.15
GARNL3-206ENST00000439286 LNPKQ9C0E8 428 aa15.96■□□□□ 0.15
GARNL3-206ENST00000439286 ALPK3Q96L96 1907 aa15.96■□□□□ 0.14
GARNL3-206ENST00000439286 ZNF536O15090 1300 aa15.95■□□□□ 0.14
GARNL3-206ENST00000439286 ARVCFO00192 962 aa15.95■□□□□ 0.14
GARNL3-206ENST00000439286 FOXP2O15409 715 aa15.95■□□□□ 0.14
GARNL3-206ENST00000439286 FGRP09769 529 aa15.95■□□□□ 0.14
GARNL3-206ENST00000439286 HSPD1P10809 573 aaKnown RBP15.95■□□□□ 0.14
GARNL3-206ENST00000439286 PCP11498 1178 aaKnown RBP15.95■□□□□ 0.14
GARNL3-206ENST00000439286 CCSAPQ6IQ19 270 aaPredicted RBP15.95■□□□□ 0.14
GARNL3-206ENST00000439286 MFSD6Q6ZSS7 791 aa15.95■□□□□ 0.14
GARNL3-206ENST00000439286 FGD4Q96M96 766 aa15.95■□□□□ 0.14
GARNL3-206ENST00000439286 TTC14Q96N46 770 aa15.95■□□□□ 0.14
GARNL3-206ENST00000439286 UPF3AQ9H1J1 476 aaKnown RBP15.95■□□□□ 0.14
GARNL3-206ENST00000439286 RNF41Q9H4P4 317 aaPredicted RBP15.95■□□□□ 0.14
GARNL3-206ENST00000439286 TCP11L1Q9NUJ3 509 aa15.95■□□□□ 0.14
GARNL3-206ENST00000439286 ADD3Q9UEY8 706 aaKnown RBP15.95■□□□□ 0.14
GARNL3-206ENST00000439286 RLFQ13129 1914 aa15.95■□□□□ 0.14
GARNL3-206ENST00000439286 A0A0D9SFI3 127 aa15.94■□□□□ 0.14
GARNL3-206ENST00000439286 MYADML2A6NDP7 307 aa15.94■□□□□ 0.14
GARNL3-206ENST00000439286 SOWAHBA6NEL2 793 aa15.94■□□□□ 0.14
GARNL3-206ENST00000439286 CABYRO75952 493 aa15.94■□□□□ 0.14
GARNL3-206ENST00000439286 TIMP1P01033 207 aa15.94■□□□□ 0.14
GARNL3-206ENST00000439286 ICAM1P05362 532 aa15.94■□□□□ 0.14
GARNL3-206ENST00000439286 ITGB8P26012 769 aa15.94■□□□□ 0.14
GARNL3-206ENST00000439286 NMIQ13287 307 aaPredicted RBP15.94■□□□□ 0.14
GARNL3-206ENST00000439286 SYDE2Q5VT97 1194 aa15.94■□□□□ 0.14
GARNL3-206ENST00000439286 IQSEC1Q6DN90 963 aa15.94■□□□□ 0.14
GARNL3-206ENST00000439286 B4GALNT3Q6L9W6 998 aa15.94■□□□□ 0.14
GARNL3-206ENST00000439286 YTHDC1Q96MU7 727 aaKnown RBP15.94■□□□□ 0.14
GARNL3-206ENST00000439286 MPHOSPH6Q99547 160 aaKnown RBP15.94■□□□□ 0.14
GARNL3-206ENST00000439286 TMEM47Q9BQJ4 181 aa15.94■□□□□ 0.14
GARNL3-206ENST00000439286 SEMA6BQ9H3T3 888 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms