RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 GIMAP7Q8NHV1 300 aa14.93□□□□□ -0.02
ACTN1-204ENST00000438964 CEP83Q9Y592 693 aa14.93□□□□□ -0.02
ACTN1-204ENST00000438964 TNKSO95271 1327 aa14.93□□□□□ -0.02
ACTN1-204ENST00000438964 RPSAP08865 295 aaKnown RBP14.93□□□□□ -0.02
ACTN1-204ENST00000438964 FECHP22830 423 aa14.93□□□□□ -0.02
ACTN1-204ENST00000438964 LSP1P33241 339 aa14.93□□□□□ -0.02
ACTN1-204ENST00000438964 GUCY2DQ02846 1103 aa14.93□□□□□ -0.02
ACTN1-204ENST00000438964 PKN1Q16512 942 aa14.93□□□□□ -0.02
ACTN1-204ENST00000438964 MAATS1Q7Z4T9 603 aa14.93□□□□□ -0.02
ACTN1-204ENST00000438964 N4BP2L2Q92802 583 aaPredicted RBP14.93□□□□□ -0.02
ACTN1-204ENST00000438964 TUBBP07437 444 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 LIFRP42702 1097 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 SETQ01105 290 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-204ENST00000438964 CCDC155Q8N6L0 562 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 TTLL11Q8NHH1 800 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 ZKSCAN4Q969J2 545 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-204ENST00000438964 CCDC42Q96M95 316 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 SH3GL2Q99962 352 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 EPB41L5Q9HCM4 733 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 SOS2Q07890 1332 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-204ENST00000438964 ZNF233A6NK53 670 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 OPLAHO14841 1288 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 CIAO1O76071 339 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 MCM3P25205 808 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 STAT6P42226 847 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 FNTAP49354 379 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 HAUS3Q68CZ6 603 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 CCDC70Q6NSX1 233 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 C8orf74Q6P047 294 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 PDXDC2PQ6P474 469 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 CNPY4Q8N129 248 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 PRPF38AQ8NAV1 312 aaKnown RBP14.92□□□□□ -0.02
ACTN1-204ENST00000438964 IFIH1Q9BYX4 1025 aaKnown RBP14.92□□□□□ -0.02
ACTN1-204ENST00000438964 ZNHIT6Q9NWK9 470 aaKnown RBP14.92□□□□□ -0.02
ACTN1-204ENST00000438964 MEGF6O75095 1541 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 TARSL2A2RTX5 802 aaKnown RBP14.92□□□□□ -0.02
ACTN1-204ENST00000438964 MEFVO15553 781 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-204ENST00000438964 CHRM1P11229 460 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-204ENST00000438964 MTIF2P46199 727 aaKnown RBP14.92□□□□□ -0.02
ACTN1-204ENST00000438964 TUBB4BP68371 445 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 TUBGCP2Q9BSJ2 902 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 GOLPH3Q9H4A6 298 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 SNX12Q9UMY4 172 aa14.92□□□□□ -0.02
ACTN1-204ENST00000438964 ARFGEF2Q9Y6D5 1785 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 LRRC10BA6NIK2 292 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 LGALS16A8MUM7 142 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 PATL2C9JE40 543 aaKnown RBP14.91□□□□□ -0.02
ACTN1-204ENST00000438964 TMOD1P28289 359 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 RDXP35241 583 aaKnown RBP14.91□□□□□ -0.02
ACTN1-204ENST00000438964 KRT83P78385 493 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 ANKLE2Q86XL3 938 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 CSGALNACT2Q8N6G5 542 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 GPKOWQ92917 476 aaPredicted RBP eCLIP14.91□□□□□ -0.02
ACTN1-204ENST00000438964 OSBPL9Q96SU4 736 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 DNAJC7Q99615 494 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 MAGEC2Q9UBF1 373 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-204ENST00000438964 ABCF2Q9UG63 623 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 WTIPA6NIX2 430 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-204ENST00000438964 FTCDO95954 541 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 CYLC1P35663 651 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-204ENST00000438964 ARID5AQ03989 594 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 CCDC178Q5BJE1 867 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 ZNF658Q5TYW1 1059 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-204ENST00000438964 ZNF473Q8WTR7 871 aaKnown RBP14.91□□□□□ -0.02
ACTN1-204ENST00000438964 KANSL2Q9H9L4 492 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 WDR19Q8NEZ3 1342 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 STK36Q9NRP7 1315 aa14.91□□□□□ -0.02
ACTN1-204ENST00000438964 TCRBV5S4A2TA0A5A2 114 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 RASSF7Q02833 373 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 RASGRF1Q13972 1273 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 SPA17Q15506 151 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 CFAP58Q5T655 872 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 KLHL7Q8IXQ5 586 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 CCDC13Q8IYE1 715 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 STIM2Q9P246 746 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 CAPN11Q9UMQ6 739 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 PPP1R12BO60237 982 aaPredicted RBP14.9□□□□□ -0.02
ACTN1-204ENST00000438964 FCER1AP12319 257 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 CDC25CP30307 473 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 ELOA2Q8IYF1 753 aaPredicted RBP14.9□□□□□ -0.02
ACTN1-204ENST00000438964 MMRN2Q9H8L6 949 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 GOLGA8KD6RF30 607 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 AKR1B10O60218 316 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 OPA1O60313 960 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 PAX7P23759 505 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 NLRP5P59047 1200 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 GFPT1Q06210 699 aaPredicted RBP14.9□□□□□ -0.02
ACTN1-204ENST00000438964 SPAG1Q07617 926 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 PPP2R5AQ15172 486 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 DDX42Q86XP3 938 aaKnown RBP eCLIP14.9□□□□□ -0.02
ACTN1-204ENST00000438964 LRRC15Q8TF66 581 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 DCAF5Q96JK2 942 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 CCT8L2Q96SF2 557 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 HAUS2Q9NVX0 235 aa14.9□□□□□ -0.02
ACTN1-204ENST00000438964 RGPD5Q99666 1765 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 HEXIM1O94992 359 aaKnown RBP14.89□□□□□ -0.03
ACTN1-204ENST00000438964 EIF4A3P38919 411 aaKnown RBP14.89□□□□□ -0.03
ACTN1-204ENST00000438964 CEP85LQ5SZL2 805 aa14.89□□□□□ -0.03
ACTN1-204ENST00000438964 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms