RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SLCO6A1Q86UG4 719 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 ZNF513Q8N8E2 541 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 BRF1Q92994 677 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 FCRL3Q96P31 734 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 SLC26A8Q96RN1 970 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 PLCD4Q9BRC7 762 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 DSCC1Q9BVC3 393 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 CCSER2Q9H7U1 834 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 AP5S1Q9NUS5 200 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 SUSD2Q9UGT4 822 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 GPR160Q9UJ42 338 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 ACSL6Q9UKU0 697 aa5.45□□□□□ -1.54
HMGB3P12-201ENST00000438745 WTIPA6NIX2 430 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 FGF10O15520 208 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 C1QTNF9P0C862 333 aa5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 ITGA4P13612 1032 aa5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 TCF3P15923 654 aa5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 GLDCP23378 1020 aa5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 ERCC5P28715 1186 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 SLC7A5Q01650 507 aa5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 SLC14A2Q15849 920 aa5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 HSF5Q4G112 596 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 GALNT18Q6P9A2 607 aa5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 FIBCD1Q8N539 461 aa5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 RCC1LQ96I51 464 aaKnown RBP5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 HAUS7Q99871 368 aa5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 MCOLN1Q9GZU1 580 aa5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 WHRNQ9P202 907 aa5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 PCDHB10Q9UN67 800 aa5.44□□□□□ -1.54
HMGB3P12-201ENST00000438745 HRKO00198 91 aa5.43□□□□□ -1.54
HMGB3P12-201ENST00000438745 RAP1GAPP47736 663 aa5.43□□□□□ -1.54
HMGB3P12-201ENST00000438745 GALK1P51570 392 aa5.43□□□□□ -1.54
HMGB3P12-201ENST00000438745 ERVFRD-1P60508 538 aa5.43□□□□□ -1.54
HMGB3P12-201ENST00000438745 PKN1Q16512 942 aa5.43□□□□□ -1.54
HMGB3P12-201ENST00000438745 CWF19L1Q69YN2 538 aaKnown RBP5.43□□□□□ -1.54
HMGB3P12-201ENST00000438745 SPOCD1Q6ZMY3 1216 aa5.43□□□□□ -1.54
HMGB3P12-201ENST00000438745 ARHGEF39Q8N4T4 335 aa5.43□□□□□ -1.54
HMGB3P12-201ENST00000438745 NLGN2Q8NFZ4 835 aa5.43□□□□□ -1.54
HMGB3P12-201ENST00000438745 CPLX3Q8WVH0 158 aa5.43□□□□□ -1.54
HMGB3P12-201ENST00000438745 KCNN1Q92952 543 aa5.43□□□□□ -1.54
HMGB3P12-201ENST00000438745 CDADC1Q9BWV3 514 aa5.43□□□□□ -1.54
HMGB3P12-201ENST00000438745 SF3B6Q9Y3B4 125 aaKnown RBP5.43□□□□□ -1.54
HMGB3P12-201ENST00000438745 TEX51A0A1B0GUA7 166 aa5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 ETV2O00321 342 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 GSTM1P09488 218 aa5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 YBX1P67809 324 aaKnown RBP5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 POU4F1Q01851 419 aa5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 KIR3DS1Q14943 382 aa5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 HLA-DQA1Q5Y7H0 255 aa5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 HEATR6Q6AI08 1181 aaKnown RBP5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 VPS37DQ86XT2 251 aa5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 C1QL4Q86Z23 238 aa5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 SIRT2Q8IXJ6 389 aa5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 NOL6Q9H6R4 1146 aaKnown RBP5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 GCM1Q9NP62 436 aa5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 CD320Q9NPF0 282 aa5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 FAM86C1Q9NVL1 165 aa5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 GPR55Q9Y2T6 319 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P12-201ENST00000438745 OR14I1A6ND48 311 aa5.41□□□□□ -1.54
HMGB3P12-201ENST00000438745 E9PSI1 815 aa5.41□□□□□ -1.54
HMGB3P12-201ENST00000438745 NFIBO00712 420 aa5.41□□□□□ -1.54
HMGB3P12-201ENST00000438745 EPHX1P07099 455 aa5.41□□□□□ -1.54
HMGB3P12-201ENST00000438745 TMEM253P0C7T8 217 aa5.41□□□□□ -1.54
HMGB3P12-201ENST00000438745 LAPTM5Q13571 262 aa5.41□□□□□ -1.54
HMGB3P12-201ENST00000438745 PPP2R5EQ16537 467 aa5.41□□□□□ -1.54
HMGB3P12-201ENST00000438745 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
HMGB3P12-201ENST00000438745 KIAA1211LQ6NV74 962 aa5.41□□□□□ -1.54
HMGB3P12-201ENST00000438745 JMJD8Q96S16 334 aa5.41□□□□□ -1.54
HMGB3P12-201ENST00000438745 MCMBPQ9BTE3 642 aa5.41□□□□□ -1.54
HMGB3P12-201ENST00000438745 ANKRD34BA5PLL1 514 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 AURKAO14965 403 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 SEMA7AO75326 666 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 PPM1BO75688 479 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 CFPP27918 469 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 PDE6BP35913 854 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 ZNF143P52747 638 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 MVKQ03426 396 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 CBX2Q14781 532 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 RCSD1Q6JBY9 416 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 VHLLQ6RSH7 139 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 CYP2R1Q6VVX0 501 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 ATG14Q6ZNE5 492 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 ZNF605Q86T29 641 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 ANKLE2Q86XL3 938 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 SLC43A3Q8NBI5 491 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 FGD4Q96M96 766 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 PTCHD1Q96NR3 888 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 GMLQ99445 158 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 TINF2Q9BSI4 451 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 GBP3Q9H0R5 595 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 CAPN10Q9HC96 672 aa5.4□□□□□ -1.54
HMGB3P12-201ENST00000438745 CUX2O14529 1486 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 CCDC180Q9P1Z9 1646 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 VAMP4O75379 141 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 FGRP09769 529 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 IFNGR1P15260 489 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 PRKCAP17252 672 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 DLG4P78352 724 aa5.39□□□□□ -1.55
HMGB3P12-201ENST00000438745 CYP4F8P98187 520 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms