RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ZNFX1Q9P2E3 1918 aaKnown RBP28.99■■■□□ 2.23
RAPGEF1-206ENST00000438647 ZNF792Q3KQV3 632 aa28.99■■■□□ 2.23
RAPGEF1-206ENST00000438647 TTBK2Q6IQ55 1244 aa28.99■■■□□ 2.23
RAPGEF1-206ENST00000438647 NCOA7Q8NI08 942 aa28.99■■■□□ 2.23
RAPGEF1-206ENST00000438647 RANBP17Q9H2T7 1088 aaKnown RBP28.99■■■□□ 2.23
RAPGEF1-206ENST00000438647 ACAD9Q9H845 621 aa28.99■■■□□ 2.23
RAPGEF1-206ENST00000438647 HOMER2Q9NSB8 354 aa28.99■■■□□ 2.23
RAPGEF1-206ENST00000438647 CYBAP13498 195 aa28.98■■■□□ 2.23
RAPGEF1-206ENST00000438647 SLC16A2P36021 539 aa28.98■■■□□ 2.23
RAPGEF1-206ENST00000438647 IFIT1BQ5T764 474 aaKnown RBP28.98■■■□□ 2.23
RAPGEF1-206ENST00000438647 ERICH6BQ5W0A0 696 aa28.98■■■□□ 2.23
RAPGEF1-206ENST00000438647 CCDC174Q6PII3 467 aa28.98■■■□□ 2.23
RAPGEF1-206ENST00000438647 AGBL1Q96MI9 1066 aa28.98■■■□□ 2.23
RAPGEF1-206ENST00000438647 HTATIP2Q9BUP3 242 aa28.98■■■□□ 2.23
RAPGEF1-206ENST00000438647 PNMA2Q9UL42 364 aa28.98■■■□□ 2.23
RAPGEF1-206ENST00000438647 E7EWF7 191 aa28.97■■■□□ 2.23
RAPGEF1-206ENST00000438647 CNGA1P29973 690 aa28.97■■■□□ 2.23
RAPGEF1-206ENST00000438647 PRPF38BQ5VTL8 546 aaKnown RBP28.97■■■□□ 2.23
RAPGEF1-206ENST00000438647 MSL3Q8N5Y2 521 aaKnown RBP28.97■■■□□ 2.23
RAPGEF1-206ENST00000438647 TINF2Q9BSI4 451 aa28.97■■■□□ 2.23
RAPGEF1-206ENST00000438647 LSG1Q9H089 658 aaKnown RBP28.97■■■□□ 2.23
RAPGEF1-206ENST00000438647 ANO2Q9NQ90 1003 aa28.97■■■□□ 2.23
RAPGEF1-206ENST00000438647 RNF146Q9NTX7 359 aa28.97■■■□□ 2.23
RAPGEF1-206ENST00000438647 NRBP1Q9UHY1 535 aa28.97■■■□□ 2.23
RAPGEF1-206ENST00000438647 CDC45O75419 566 aa28.96■■■□□ 2.23
RAPGEF1-206ENST00000438647 ICAM1P05362 532 aa28.96■■■□□ 2.23
RAPGEF1-206ENST00000438647 ALAS1P13196 640 aa28.96■■■□□ 2.23
RAPGEF1-206ENST00000438647 SART3Q15020 963 aaKnown RBP28.96■■■□□ 2.23
RAPGEF1-206ENST00000438647 NECAB2Q7Z6G3 386 aa28.96■■■□□ 2.23
RAPGEF1-206ENST00000438647 TRERF1Q96PN7 1200 aa28.96■■■□□ 2.23
RAPGEF1-206ENST00000438647 DDX20Q9UHI6 824 aaKnown RBP28.96■■■□□ 2.23
RAPGEF1-206ENST00000438647 CCPG1Q9ULG6 757 aa28.96■■■□□ 2.23
RAPGEF1-206ENST00000438647 DNAJC25-GNG10A0A024R161 153 aa28.95■■■□□ 2.22
RAPGEF1-206ENST00000438647 ERICH2A1L162 156 aa28.95■■■□□ 2.22
RAPGEF1-206ENST00000438647 SNAP25P60880 206 aa28.95■■■□□ 2.22
RAPGEF1-206ENST00000438647 ASPRV1Q53RT3 343 aa28.95■■■□□ 2.22
RAPGEF1-206ENST00000438647 LHX8Q68G74 356 aa28.95■■■□□ 2.22
RAPGEF1-206ENST00000438647 CYB5R4Q7L1T6 521 aa28.95■■■□□ 2.22
RAPGEF1-206ENST00000438647 ZNF467Q7Z7K2 595 aaPredicted RBP28.94■■■□□ 2.22
RAPGEF1-206ENST00000438647 TRPV1Q8NER1 839 aa28.94■■■□□ 2.22
RAPGEF1-206ENST00000438647 PAWRQ96IZ0 340 aaKnown RBP28.94■■■□□ 2.22
RAPGEF1-206ENST00000438647 PLXNA1Q9UIW2 1896 aa28.93■■■□□ 2.22
RAPGEF1-206ENST00000438647 SEPT4O43236 478 aa28.93■■■□□ 2.22
RAPGEF1-206ENST00000438647 SEC23AQ15436 765 aa28.93■■■□□ 2.22
RAPGEF1-206ENST00000438647 PFASO15067 1338 aa28.93■■■□□ 2.22
RAPGEF1-206ENST00000438647 IFIT3O14879 490 aaKnown RBP28.92■■■□□ 2.22
RAPGEF1-206ENST00000438647 PARP1P09874 1014 aaKnown RBP28.92■■■□□ 2.22
RAPGEF1-206ENST00000438647 GOLGA8HP0CJ92 632 aa28.92■■■□□ 2.22
RAPGEF1-206ENST00000438647 PPP4R2Q9NY27 417 aa28.92■■■□□ 2.22
RAPGEF1-206ENST00000438647 CNPY2Q9Y2B0 182 aa28.92■■■□□ 2.22
RAPGEF1-206ENST00000438647 TAF6LQ9Y6J9 622 aa28.92■■■□□ 2.22
RAPGEF1-206ENST00000438647 SYNGAP1Q96PV0 1343 aa28.92■■■□□ 2.22
RAPGEF1-206ENST00000438647 POTEB2H3BUK9 544 aa28.91■■■□□ 2.22
RAPGEF1-206ENST00000438647 MAMDC4Q6UXC1 1216 aa28.91■■■□□ 2.22
RAPGEF1-206ENST00000438647 STOX1Q6ZVD7 989 aa28.91■■■□□ 2.22
RAPGEF1-206ENST00000438647 A1CFQ9NQ94 594 aaKnown RBP28.91■■■□□ 2.22
RAPGEF1-206ENST00000438647 DPF3Q92784 378 aa28.9■■■□□ 2.22
RAPGEF1-206ENST00000438647 WDR19Q8NEZ3 1342 aa28.9■■■□□ 2.22
RAPGEF1-206ENST00000438647 SLC27A2O14975 620 aa28.89■■■□□ 2.22
RAPGEF1-206ENST00000438647 WTAPQ15007 396 aa28.89■■■□□ 2.22
RAPGEF1-206ENST00000438647 PRAMEF19Q5SWL8 479 aa28.89■■■□□ 2.22
RAPGEF1-206ENST00000438647 RNF20Q5VTR2 975 aa28.89■■■□□ 2.22
RAPGEF1-206ENST00000438647 DIS3LQ8TF46 1054 aaKnown RBP28.89■■■□□ 2.22
RAPGEF1-206ENST00000438647 C11orf49Q9H6J7 331 aa28.89■■■□□ 2.22
RAPGEF1-206ENST00000438647 NECTIN1Q15223 517 aa28.88■■■□□ 2.21
RAPGEF1-206ENST00000438647 CREB3L3Q68CJ9 461 aa28.88■■■□□ 2.21
RAPGEF1-206ENST00000438647 MB21D2Q8IYB1 491 aaPredicted RBP28.88■■■□□ 2.21
RAPGEF1-206ENST00000438647 FAM133AQ8N9E0 248 aa28.88■■■□□ 2.21
RAPGEF1-206ENST00000438647 MTA3Q9BTC8 594 aa28.88■■■□□ 2.21
RAPGEF1-206ENST00000438647 UBA5Q9GZZ9 404 aa28.88■■■□□ 2.21
RAPGEF1-206ENST00000438647 MNX1P50219 401 aaPredicted RBP28.87■■■□□ 2.21
RAPGEF1-206ENST00000438647 MUM1L1Q5H9M0 696 aa28.87■■■□□ 2.21
RAPGEF1-206ENST00000438647 TMEM67Q5HYA8 995 aa28.87■■■□□ 2.21
RAPGEF1-206ENST00000438647 NSMFQ6X4W1 530 aa28.86■■■□□ 2.21
RAPGEF1-206ENST00000438647 CHST3Q7LGC8 479 aa28.86■■■□□ 2.21
RAPGEF1-206ENST00000438647 ARRDC4Q8NCT1 418 aa28.86■■■□□ 2.21
RAPGEF1-206ENST00000438647 CYP39A1Q9NYL5 469 aa28.86■■■□□ 2.21
RAPGEF1-206ENST00000438647 DHX16O60231 1041 aaKnown RBP28.85■■■□□ 2.21
RAPGEF1-206ENST00000438647 AKR1A1P14550 325 aa28.85■■■□□ 2.21
RAPGEF1-206ENST00000438647 MCM5P33992 734 aa28.85■■■□□ 2.21
RAPGEF1-206ENST00000438647 CNTN2Q02246 1040 aa28.85■■■□□ 2.21
RAPGEF1-206ENST00000438647 ADGRF4Q8IZF3 695 aa28.85■■■□□ 2.21
RAPGEF1-206ENST00000438647 CPVLQ9H3G5 476 aa28.85■■■□□ 2.21
RAPGEF1-206ENST00000438647 NR2E3Q9Y5X4 410 aa28.85■■■□□ 2.21
RAPGEF1-206ENST00000438647 FRMPD3Q5JV73 1810 aa28.85■■■□□ 2.21
RAPGEF1-206ENST00000438647 ASB14A6NK59 587 aa28.84■■■□□ 2.21
RAPGEF1-206ENST00000438647 DNM1LO00429 736 aa28.84■■■□□ 2.21
RAPGEF1-206ENST00000438647 ZNF865P0CJ78 1059 aaPredicted RBP28.84■■■□□ 2.21
RAPGEF1-206ENST00000438647 RARBP10826 455 aa28.84■■■□□ 2.21
RAPGEF1-206ENST00000438647 ANTXR2P58335 489 aa28.84■■■□□ 2.21
RAPGEF1-206ENST00000438647 CDC37Q16543 378 aaPredicted RBP28.84■■■□□ 2.21
RAPGEF1-206ENST00000438647 CATIPQ7Z7H3 387 aa28.84■■■□□ 2.21
RAPGEF1-206ENST00000438647 FGD4Q96M96 766 aa28.84■■■□□ 2.21
RAPGEF1-206ENST00000438647 ABHD16BQ9H3Z7 469 aa28.84■■■□□ 2.21
RAPGEF1-206ENST00000438647 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.84■■■□□ 2.21
RAPGEF1-206ENST00000438647 SNAI1O95863 264 aaPredicted RBP28.83■■■□□ 2.21
RAPGEF1-206ENST00000438647 ANO1Q5XXA6 986 aa28.83■■■□□ 2.21
RAPGEF1-206ENST00000438647 ARMCX2Q7L311 632 aa28.83■■■□□ 2.21
RAPGEF1-206ENST00000438647 IGDCC4Q8TDY8 1250 aa28.83■■■□□ 2.21
RAPGEF1-206ENST00000438647 ZHX1Q9UKY1 873 aaPredicted RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms