RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 TBC1D8O95759 1140 aa13.34□□□□□ -0.27
SNHG3-202ENST00000437681 CYP2C8P10632 490 aa13.34□□□□□ -0.27
SNHG3-202ENST00000437681 ZYXQ15942 572 aaKnown RBP13.34□□□□□ -0.27
SNHG3-202ENST00000437681 ZNF296Q8WUU4 475 aaPredicted RBP13.34□□□□□ -0.27
SNHG3-202ENST00000437681 USP6NLQ92738 828 aa13.34□□□□□ -0.27
SNHG3-202ENST00000437681 COA7Q96BR5 231 aa13.34□□□□□ -0.27
SNHG3-202ENST00000437681 STAT3P40763 770 aa13.33□□□□□ -0.28
SNHG3-202ENST00000437681 MORN1Q5T089 497 aa13.33□□□□□ -0.28
SNHG3-202ENST00000437681 TMTC3Q6ZXV5 915 aa13.33□□□□□ -0.28
SNHG3-202ENST00000437681 PLEKHH3Q7Z736 793 aa13.33□□□□□ -0.28
SNHG3-202ENST00000437681 PXYLP1Q8TE99 480 aa13.33□□□□□ -0.28
SNHG3-202ENST00000437681 ATG4CQ96DT6 458 aa13.33□□□□□ -0.28
SNHG3-202ENST00000437681 KLRF2D3W0D1 207 aa13.33□□□□□ -0.28
SNHG3-202ENST00000437681 GRB14Q14449 540 aa13.33□□□□□ -0.28
SNHG3-202ENST00000437681 SH2B1Q9NRF2 756 aaPredicted RBP13.33□□□□□ -0.28
SNHG3-202ENST00000437681 BTBD7Q9P203 1132 aa13.33□□□□□ -0.28
SNHG3-202ENST00000437681 BRPF3Q9ULD4 1205 aa13.33□□□□□ -0.28
SNHG3-202ENST00000437681 STK36Q9NRP7 1315 aa13.33□□□□□ -0.28
SNHG3-202ENST00000437681 PNMA6FA0A0J9YX94 578 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 ZBTB5O15062 677 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 CDKL5O76039 1030 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 SEC24BO95487 1268 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 TOB2Q14106 344 aaPredicted RBP13.32□□□□□ -0.28
SNHG3-202ENST00000437681 TMEM132BQ14DG7 1078 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 RTN1Q16799 776 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 MCF2L2Q86YR7 1114 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 SPICE1Q8N0Z3 855 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 PFKFB2O60825 505 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 PTPREP23469 700 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 OLFML2BQ68BL8 750 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 CPLX2Q6PUV4 134 aaKnown RBP13.32□□□□□ -0.28
SNHG3-202ENST00000437681 MOV10L1Q9BXT6 1211 aaKnown RBP13.32□□□□□ -0.28
SNHG3-202ENST00000437681 SRRDQ9UH36 339 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 CPA4Q9UI42 421 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 MRPL11Q9Y3B7 192 aaKnown RBP13.32□□□□□ -0.28
SNHG3-202ENST00000437681 ZNF536O15090 1300 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 MYH6P13533 1939 aa13.32□□□□□ -0.28
SNHG3-202ENST00000437681 ST18O60284 1047 aa13.31□□□□□ -0.28
SNHG3-202ENST00000437681 IGHA2P01877 340 aa13.31□□□□□ -0.28
SNHG3-202ENST00000437681 POTEEQ6S8J3 1075 aa13.31□□□□□ -0.28
SNHG3-202ENST00000437681 ADGRF4Q8IZF3 695 aa13.31□□□□□ -0.28
SNHG3-202ENST00000437681 ANKRD13CQ8N6S4 541 aa13.31□□□□□ -0.28
SNHG3-202ENST00000437681 RRP36Q96EU6 259 aaKnown RBP13.31□□□□□ -0.28
SNHG3-202ENST00000437681 KIF2CQ99661 725 aa13.31□□□□□ -0.28
SNHG3-202ENST00000437681 KLF18A0A0U1RQI7 1052 aa13.31□□□□□ -0.28
SNHG3-202ENST00000437681 RGS2P41220 211 aa13.31□□□□□ -0.28
SNHG3-202ENST00000437681 METAP2P50579 478 aaKnown RBP eCLIP13.31□□□□□ -0.289e-12■□□□□ 10
SNHG3-202ENST00000437681 FBXO46Q6PJ61 603 aaPredicted RBP13.31□□□□□ -0.28
SNHG3-202ENST00000437681 KCTD1Q719H9 257 aa13.31□□□□□ -0.28
SNHG3-202ENST00000437681 LLPHQ9BRT6 129 aaKnown RBP13.31□□□□□ -0.28
SNHG3-202ENST00000437681 AMNQ9BXJ7 453 aa13.31□□□□□ -0.28
SNHG3-202ENST00000437681 RNF26Q9BY78 433 aaPredicted RBP13.31□□□□□ -0.28
SNHG3-202ENST00000437681 ACAD9Q9H845 621 aa13.31□□□□□ -0.28
SNHG3-202ENST00000437681 JMJD4Q9H9V9 463 aa13.31□□□□□ -0.28
SNHG3-202ENST00000437681 SH3GLB2Q9NR46 395 aa13.31□□□□□ -0.28
SNHG3-202ENST00000437681 PLXNA1Q9UIW2 1896 aa13.31□□□□□ -0.28
SNHG3-202ENST00000437681 GOLGA8AA7E2F4 631 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 GOLGA8BA8MQT2 603 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 PRPF3O43395 683 aaKnown RBP13.3□□□□□ -0.28
SNHG3-202ENST00000437681 IFNAR1P17181 557 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 PDIA3P30101 505 aaKnown RBP13.3□□□□□ -0.28
SNHG3-202ENST00000437681 SLAIN1Q8ND83 568 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 KIFC2Q96AC6 838 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 NUP88Q99567 741 aaPredicted RBP13.3□□□□□ -0.28
SNHG3-202ENST00000437681 EFCC1Q9HA90 598 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 TXNRD2Q9NNW7 524 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 B4DLN1 442 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 MRPL12P52815 198 aaKnown RBP13.3□□□□□ -0.28
SNHG3-202ENST00000437681 FUT2Q10981 343 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 DGKZQ13574 1117 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 GPR142Q7Z601 462 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 NUDT12Q9BQG2 462 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 R3HDMLQ9H3Y0 253 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 GJD2Q9UKL4 321 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 HPS5Q9UPZ3 1129 aa13.3□□□□□ -0.28
SNHG3-202ENST00000437681 ZNFX1Q9P2E3 1918 aaKnown RBP13.3□□□□□ -0.28
SNHG3-202ENST00000437681 FCER1AP12319 257 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 ANP32AP39687 249 aaKnown RBP13.29□□□□□ -0.28
SNHG3-202ENST00000437681 PSMC4P43686 418 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 LBX1P52954 281 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 CDC37Q16543 378 aaPredicted RBP13.29□□□□□ -0.28
SNHG3-202ENST00000437681 CCDC12Q8WUD4 166 aaPredicted RBP13.29□□□□□ -0.28
SNHG3-202ENST00000437681 BRF1Q92994 677 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 MPHOSPH6Q99547 160 aaKnown RBP13.29□□□□□ -0.28
SNHG3-202ENST00000437681 APBA2Q99767 749 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 GPCPD1Q9NPB8 672 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 FBXO28Q9NVF7 368 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 LIMCH1Q9UPQ0 1083 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 PTPN22Q9Y2R2 807 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 IVNS1ABPQ9Y6Y0 642 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 DNAJC25-GNG10A0A024R161 153 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 ESYT2A0FGR8 921 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 IKQ13123 557 aaPredicted RBP13.29□□□□□ -0.28
SNHG3-202ENST00000437681 MAP2K5Q13163 448 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 FBXO11Q86XK2 927 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 SEC63Q9UGP8 760 aaKnown RBP13.29□□□□□ -0.28
SNHG3-202ENST00000437681 CNTNAP5Q8WYK1 1306 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 LRRC37A2A6NM11 1700 aa13.29□□□□□ -0.28
SNHG3-202ENST00000437681 PIK3CDO00329 1044 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 TNPO2O14787 897 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms