RNA–Protein interactions for RNA: ENST00000436564.5

COPS7B-212, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-212ENST00000436564 AACSQ86V21 672 aa13.09□□□□□ -0.31
COPS7B-212ENST00000436564 TMEM57Q8N5G2 664 aa13.09□□□□□ -0.31
COPS7B-212ENST00000436564 MSL3Q8N5Y2 521 aaKnown RBP13.09□□□□□ -0.31
COPS7B-212ENST00000436564 PCSK9Q8NBP7 692 aaKnown RBP13.09□□□□□ -0.31
COPS7B-212ENST00000436564 DDX11Q96FC9 970 aa13.09□□□□□ -0.31
COPS7B-212ENST00000436564 CCDC17Q96LX7 622 aa13.09□□□□□ -0.31
COPS7B-212ENST00000436564 PPP1R12CQ9BZL4 782 aa13.09□□□□□ -0.31
COPS7B-212ENST00000436564 MTIF3Q9H2K0 278 aaKnown RBP13.09□□□□□ -0.31
COPS7B-212ENST00000436564 C1orf115Q9H7X2 142 aa13.09□□□□□ -0.31
COPS7B-212ENST00000436564 SLC28A3Q9HAS3 691 aa13.09□□□□□ -0.31
COPS7B-212ENST00000436564 FBXO28Q9NVF7 368 aa13.09□□□□□ -0.31
COPS7B-212ENST00000436564 TLR3O15455 904 aaKnown RBP13.08□□□□□ -0.32
COPS7B-212ENST00000436564 DUSP11O75319 330 aaKnown RBP13.08□□□□□ -0.32
COPS7B-212ENST00000436564 ASGR1P07306 291 aa13.08□□□□□ -0.32
COPS7B-212ENST00000436564 PDE6AP16499 860 aa13.08□□□□□ -0.32
COPS7B-212ENST00000436564 CDK7P50613 346 aa13.08□□□□□ -0.32
COPS7B-212ENST00000436564 CAMK2BQ13554 666 aa13.08□□□□□ -0.32
COPS7B-212ENST00000436564 RASIP1Q5U651 963 aa13.08□□□□□ -0.32
COPS7B-212ENST00000436564 CCSAPQ6IQ19 270 aaPredicted RBP13.08□□□□□ -0.32
COPS7B-212ENST00000436564 OXER1Q8TDS5 423 aa13.08□□□□□ -0.32
COPS7B-212ENST00000436564 GOPCQ9HD26 462 aa13.08□□□□□ -0.32
COPS7B-212ENST00000436564 ZNF214Q9UL59 606 aaPredicted RBP13.08□□□□□ -0.32
COPS7B-212ENST00000436564 PPP1R9AQ9ULJ8 1098 aa13.08□□□□□ -0.32
COPS7B-212ENST00000436564 FOCADQ5VW36 1801 aa13.08□□□□□ -0.32
COPS7B-212ENST00000436564 SYNGAP1Q96PV0 1343 aa13.08□□□□□ -0.32
COPS7B-212ENST00000436564 ZNF532Q9HCE3 1301 aa13.08□□□□□ -0.32
COPS7B-212ENST00000436564 A0A0U1RQG5 324 aaPredicted RBP13.07□□□□□ -0.32
COPS7B-212ENST00000436564 MYADML2A6NDP7 307 aa13.07□□□□□ -0.32
COPS7B-212ENST00000436564 ARVCFO00192 962 aa13.07□□□□□ -0.32
COPS7B-212ENST00000436564 SNAI1O95863 264 aaPredicted RBP13.07□□□□□ -0.32
COPS7B-212ENST00000436564 EEF2P13639 858 aaKnown RBP13.07□□□□□ -0.32
COPS7B-212ENST00000436564 AMOTL1Q8IY63 956 aa13.07□□□□□ -0.32
COPS7B-212ENST00000436564 LCORLQ8N3X6 602 aa13.07□□□□□ -0.32
COPS7B-212ENST00000436564 C1QTNF1Q9BXJ1 281 aa13.07□□□□□ -0.32
COPS7B-212ENST00000436564 NKX2-4Q9H2Z4 354 aa13.07□□□□□ -0.32
COPS7B-212ENST00000436564 KANSL2Q9H9L4 492 aa13.07□□□□□ -0.32
COPS7B-212ENST00000436564 FGBP02675 491 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 CST5P28325 142 aaPredicted RBP13.06□□□□□ -0.32
COPS7B-212ENST00000436564 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 CDK8P49336 464 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 ACVR2BQ13705 512 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 GNASQ5JWF2 1037 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 FAM83BQ5T0W9 1011 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 ZKSCAN2Q63HK3 967 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 SNRNP48Q6IEG0 339 aaKnown RBP13.06□□□□□ -0.32
COPS7B-212ENST00000436564 MAMDC4Q6UXC1 1216 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 ERC1Q8IUD2 1116 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 MICALL1Q8N3F8 863 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 HERVK_113Q902F9 699 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 TEX13BQ9BXU2 312 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 ARMT1Q9H993 441 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 IL23AQ9NPF7 189 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 ATP8A2Q9NTI2 1148 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 CDK5RAP2Q96SN8 1893 aa13.06□□□□□ -0.32
COPS7B-212ENST00000436564 GOLIM4O00461 696 aa13.05□□□□□ -0.32
COPS7B-212ENST00000436564 CYP2C18P33260 490 aa13.05□□□□□ -0.32
COPS7B-212ENST00000436564 AAK1Q2M2I8 961 aa13.05□□□□□ -0.32
COPS7B-212ENST00000436564 FAM126BQ8IXS8 530 aa13.05□□□□□ -0.32
COPS7B-212ENST00000436564 REPS2Q8NFH8 660 aa13.05□□□□□ -0.32
COPS7B-212ENST00000436564 DDRGK1Q96HY6 314 aa13.05□□□□□ -0.32
COPS7B-212ENST00000436564 NECAB3Q96P71 396 aaPredicted RBP13.05□□□□□ -0.32
COPS7B-212ENST00000436564 DNAJC2Q99543 621 aaKnown RBP13.05□□□□□ -0.32
COPS7B-212ENST00000436564 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.05□□□□□ -0.32
COPS7B-212ENST00000436564 CXXC1Q9P0U4 656 aaPredicted RBP13.05□□□□□ -0.32
COPS7B-212ENST00000436564 CTDP1Q9Y5B0 961 aaPredicted RBP13.05□□□□□ -0.32
COPS7B-212ENST00000436564 MYH1P12882 1939 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 DNAJC25-GNG10A0A024R161 153 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 TCRBV5S4A2TA0A5A2 114 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 PRKAB2O43741 272 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 GJA9P57773 515 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 SKIV2LQ15477 1246 aaKnown RBP13.04□□□□□ -0.32
COPS7B-212ENST00000436564 CCDC144BQ3MJ40 725 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 C12orf60Q5U649 245 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 OTOP2Q7RTS6 562 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 FTSJ3Q8IY81 847 aaKnown RBP13.04□□□□□ -0.32
COPS7B-212ENST00000436564 SLF1Q9BQI6 1058 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 ABHD16BQ9H3Z7 469 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 HIPK3Q9H422 1215 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 EXOC6BQ9Y2D4 811 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 YBX2Q9Y2T7 364 aaKnown RBP13.04□□□□□ -0.32
COPS7B-212ENST00000436564 RIPK3Q9Y572 518 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 A0A0G2JMZ2 1700 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 CHD9Q3L8U1 2897 aa13.04□□□□□ -0.32
COPS7B-212ENST00000436564 CYP2D7A0A087X1C5 515 aa13.03□□□□□ -0.32
COPS7B-212ENST00000436564 POTEMA6NI47 508 aa13.03□□□□□ -0.32
COPS7B-212ENST00000436564 USP17L12C9JPN9 530 aa13.03□□□□□ -0.32
COPS7B-212ENST00000436564 USP17L21D6R901 530 aa13.03□□□□□ -0.32
COPS7B-212ENST00000436564 MBD4O95243 580 aa13.03□□□□□ -0.32
COPS7B-212ENST00000436564 BMP1P13497 986 aa13.03□□□□□ -0.32
COPS7B-212ENST00000436564 PPP2R2DQ66LE6 453 aa13.03□□□□□ -0.32
COPS7B-212ENST00000436564 POTEGQ6S5H5 508 aa13.03□□□□□ -0.32
COPS7B-212ENST00000436564 C16orf86Q6ZW13 317 aa13.03□□□□□ -0.32
COPS7B-212ENST00000436564 NOL8Q76FK4 1167 aaKnown RBP13.03□□□□□ -0.32
COPS7B-212ENST00000436564 ITPRIPQ8IWB1 547 aa13.03□□□□□ -0.32
COPS7B-212ENST00000436564 CPXCR1Q8N123 301 aa13.03□□□□□ -0.32
COPS7B-212ENST00000436564 ANKRD35Q8N283 1001 aa13.03□□□□□ -0.32
COPS7B-212ENST00000436564 NUP88Q99567 741 aaPredicted RBP13.03□□□□□ -0.32
COPS7B-212ENST00000436564 UPF3AQ9H1J1 476 aaKnown RBP13.03□□□□□ -0.32
COPS7B-212ENST00000436564 IL1RAPL2Q9NP60 686 aa13.03□□□□□ -0.32
COPS7B-212ENST00000436564 SMIM22K7EJ46 135 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms