RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 ABHD16BQ9H3Z7 469 aa15.95■□□□□ 0.14
CDC42EP1-204ENST00000434728 DNAJC25-GNG10A0A024R161 153 aa15.94■□□□□ 0.14
CDC42EP1-204ENST00000434728 A0A0U1RQG5 324 aaPredicted RBP15.94■□□□□ 0.14
CDC42EP1-204ENST00000434728 ATP2A1O14983 1001 aa15.94■□□□□ 0.14
CDC42EP1-204ENST00000434728 TIMP1P01033 207 aa15.94■□□□□ 0.14
CDC42EP1-204ENST00000434728 ASGR1P07306 291 aa15.94■□□□□ 0.14
CDC42EP1-204ENST00000434728 EPHB4P54760 987 aa15.94■□□□□ 0.14
CDC42EP1-204ENST00000434728 PPIGQ13427 754 aaKnown RBP eCLIP15.94■□□□□ 0.14
CDC42EP1-204ENST00000434728 CCDC144BQ3MJ40 725 aa15.94■□□□□ 0.14
CDC42EP1-204ENST00000434728 ERICH6BQ5W0A0 696 aa15.94■□□□□ 0.14
CDC42EP1-204ENST00000434728 ARMCX2Q7L311 632 aa15.94■□□□□ 0.14
CDC42EP1-204ENST00000434728 SLC38A10Q9HBR0 1119 aa15.94■□□□□ 0.14
CDC42EP1-204ENST00000434728 MTMR4Q9NYA4 1195 aa15.94■□□□□ 0.14
CDC42EP1-204ENST00000434728 ELP1O95163 1332 aa15.94■□□□□ 0.14
CDC42EP1-204ENST00000434728 CDH23Q9H251 3354 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 MYADML2A6NDP7 307 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 TMEM232C9JQI7 657 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 BMP3P12645 472 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 STAT2P52630 851 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 OAZ1P54368 228 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 SLFN13Q68D06 897 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 TMEM199Q8N511 208 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 GMCL1P1Q8NEA9 526 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 KLHDC9Q8NEP7 349 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 CHMP4CQ96CF2 233 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 NAPBQ9H115 298 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 ACAD9Q9H845 621 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 EPB41L4AQ9HCS5 686 aaPredicted RBP15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 SYNPO2Q9UMS6 1093 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 SUPT16HQ9Y5B9 1047 aaKnown RBP15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 MYO9BQ13459 2157 aa15.93■□□□□ 0.14
CDC42EP1-204ENST00000434728 M0R2C6 588 aa15.92■□□□□ 0.14
CDC42EP1-204ENST00000434728 ERC2O15083 957 aa15.92■□□□□ 0.14
CDC42EP1-204ENST00000434728 FDX1P10109 184 aa15.92■□□□□ 0.14
CDC42EP1-204ENST00000434728 CST5P28325 142 aaPredicted RBP15.92■□□□□ 0.14
CDC42EP1-204ENST00000434728 SLC1A4P43007 532 aa15.92■□□□□ 0.14
CDC42EP1-204ENST00000434728 PPP4R3BQ5MIZ7 849 aa15.92■□□□□ 0.14
CDC42EP1-204ENST00000434728 MFSD5Q6N075 450 aa15.92■□□□□ 0.14
CDC42EP1-204ENST00000434728 CCDC144CPQ8IYA2 1237 aa15.92■□□□□ 0.14
CDC42EP1-204ENST00000434728 CHURC1Q8WUH1 139 aa15.92■□□□□ 0.14
CDC42EP1-204ENST00000434728 SYMPKQ92797 1274 aaKnown RBP15.92■□□□□ 0.14
CDC42EP1-204ENST00000434728 TIFAQ96CG3 184 aa15.92■□□□□ 0.14
CDC42EP1-204ENST00000434728 FSD1Q9BTV5 496 aa15.92■□□□□ 0.14
CDC42EP1-204ENST00000434728 PPP1R12CQ9BZL4 782 aa15.92■□□□□ 0.14
CDC42EP1-204ENST00000434728 VCANP13611 3396 aa15.92■□□□□ 0.14
CDC42EP1-204ENST00000434728 IGKV6D-41A0A0C4DH26 115 aa15.91■□□□□ 0.14
CDC42EP1-204ENST00000434728 PATL2C9JE40 543 aaKnown RBP15.91■□□□□ 0.14
CDC42EP1-204ENST00000434728 GJA9P57773 515 aa15.91■□□□□ 0.14
CDC42EP1-204ENST00000434728 C20orf194Q5TEA3 1177 aa15.91■□□□□ 0.14
CDC42EP1-204ENST00000434728 FAM160B2Q86V87 743 aa15.91■□□□□ 0.14
CDC42EP1-204ENST00000434728 IFNL3Q8IZI9 196 aa15.91■□□□□ 0.14
CDC42EP1-204ENST00000434728 MKL1Q969V6 931 aa15.91■□□□□ 0.14
CDC42EP1-204ENST00000434728 GAS2L1Q99501 681 aaPredicted RBP15.91■□□□□ 0.14
CDC42EP1-204ENST00000434728 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.91■□□□□ 0.14
CDC42EP1-204ENST00000434728 MTIF3Q9H2K0 278 aaKnown RBP15.91■□□□□ 0.14
CDC42EP1-204ENST00000434728 ZNF576Q9H609 170 aa15.91■□□□□ 0.14
CDC42EP1-204ENST00000434728 RNF146Q9NTX7 359 aa15.91■□□□□ 0.14
CDC42EP1-204ENST00000434728 TBX21Q9UL17 535 aa15.91■□□□□ 0.14
CDC42EP1-204ENST00000434728 TTC28Q96AY4 2481 aa15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 ARVCFO00192 962 aa15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 CSF2RAP15509 400 aa15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 IRX5P78411 483 aaPredicted RBP15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 TFAP4Q01664 338 aa15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 CNTN2Q02246 1040 aa15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 TNFAIP2Q03169 654 aa15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 GRIN2CQ14957 1233 aa15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 CCSAPQ6IQ19 270 aaPredicted RBP15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 PSRC1Q6PGN9 363 aaPredicted RBP15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 NEDD1Q8NHV4 660 aa15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 AP5M1Q9H0R1 490 aa15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 UPF3AQ9H1J1 476 aaKnown RBP15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 ZBTB47Q9UFB7 747 aaPredicted RBP15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 STX8Q9UNK0 236 aa15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 MTMR7Q9Y216 660 aa15.9■□□□□ 0.14
CDC42EP1-204ENST00000434728 ASB14A6NK59 587 aa15.89■□□□□ 0.13
CDC42EP1-204ENST00000434728 TSPY2A6NKD2 308 aa15.89■□□□□ 0.13
CDC42EP1-204ENST00000434728 ZEB2O60315 1214 aa15.89■□□□□ 0.13
CDC42EP1-204ENST00000434728 ALAS1P13196 640 aa15.89■□□□□ 0.13
CDC42EP1-204ENST00000434728 BEX3Q00994 111 aa15.89■□□□□ 0.13
CDC42EP1-204ENST00000434728 PPARAQ07869 468 aa15.89■□□□□ 0.13
CDC42EP1-204ENST00000434728 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDC42EP1-204ENST00000434728 PPM1EQ8WY54 764 aa15.89■□□□□ 0.13
CDC42EP1-204ENST00000434728 DCTPP1Q9H773 170 aa15.89■□□□□ 0.13
CDC42EP1-204ENST00000434728 PLIN4Q96Q06 1357 aa15.88■□□□□ 0.13
CDC42EP1-204ENST00000434728 ADCY6O43306 1168 aa15.88■□□□□ 0.13
CDC42EP1-204ENST00000434728 ACRP10323 421 aa15.88■□□□□ 0.13
CDC42EP1-204ENST00000434728 MCCP23508 829 aa15.88■□□□□ 0.13
CDC42EP1-204ENST00000434728 TKFCQ3LXA3 575 aa15.88■□□□□ 0.13
CDC42EP1-204ENST00000434728 TLK2Q86UE8 772 aa15.88■□□□□ 0.13
CDC42EP1-204ENST00000434728 STAG1Q8WVM7 1258 aa15.88■□□□□ 0.13
CDC42EP1-204ENST00000434728 GMCL1Q96IK5 515 aa15.88■□□□□ 0.13
CDC42EP1-204ENST00000434728 AGBL1Q96MI9 1066 aa15.88■□□□□ 0.13
CDC42EP1-204ENST00000434728 TRERF1Q96PN7 1200 aa15.88■□□□□ 0.13
CDC42EP1-204ENST00000434728 A1CFQ9NQ94 594 aaKnown RBP15.88■□□□□ 0.13
CDC42EP1-204ENST00000434728 MSRAQ9UJ68 235 aa15.88■□□□□ 0.13
CDC42EP1-204ENST00000434728 TTC41PQ6P2S7 1318 aa15.88■□□□□ 0.13
CDC42EP1-204ENST00000434728 CABYRO75952 493 aa15.87■□□□□ 0.13
CDC42EP1-204ENST00000434728 CDK7P50613 346 aa15.87■□□□□ 0.13
CDC42EP1-204ENST00000434728 FSCN1Q16658 493 aaKnown RBP15.87■□□□□ 0.13
CDC42EP1-204ENST00000434728 CCDC96Q2M329 555 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms