RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 ICAM1P05362 532 aa17.12■□□□□ 0.33
TNFAIP3-204ENST00000433680 CTGFP29279 349 aa17.12■□□□□ 0.33
TNFAIP3-204ENST00000433680 TKFCQ3LXA3 575 aa17.12■□□□□ 0.33
TNFAIP3-204ENST00000433680 SNRNP48Q6IEG0 339 aaKnown RBP17.12■□□□□ 0.33
TNFAIP3-204ENST00000433680 PLEKHH3Q7Z736 793 aa17.12■□□□□ 0.33
TNFAIP3-204ENST00000433680 MICU3Q86XE3 530 aa17.12■□□□□ 0.33
TNFAIP3-204ENST00000433680 CPXCR1Q8N123 301 aa17.12■□□□□ 0.33
TNFAIP3-204ENST00000433680 MYL10Q9BUA6 226 aa17.12■□□□□ 0.33
TNFAIP3-204ENST00000433680 ARHGAP39Q9C0H5 1083 aa17.12■□□□□ 0.33
TNFAIP3-204ENST00000433680 RIOX1Q9H6W3 641 aa17.12■□□□□ 0.33
TNFAIP3-204ENST00000433680 RAVER2Q9HCJ3 691 aaKnown RBP17.12■□□□□ 0.33
TNFAIP3-204ENST00000433680 FBXO40Q9UH90 709 aa17.12■□□□□ 0.33
TNFAIP3-204ENST00000433680 ZSWIM8A7E2V4 1837 aa17.12■□□□□ 0.33
TNFAIP3-204ENST00000433680 CCDC196A0A1B0GTZ2 297 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 DHX16O60231 1041 aaKnown RBP17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 ERCC3P19447 782 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 APOBRQ0VD83 1088 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 TRAF1Q13077 416 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 TOB2Q14106 344 aaPredicted RBP17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 GPR142Q7Z601 462 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 NCAPG2Q86XI2 1143 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 ABRAQ8N0Z2 381 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 CHST13Q8NET6 341 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 SOCS4Q8WXH5 440 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 ZNF274Q96GC6 653 aaPredicted RBP17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 SPZ1Q9BXG8 430 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 JMJD4Q9H9V9 463 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 SRRDQ9UH36 339 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 IVNS1ABPQ9Y6Y0 642 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 ZNF536O15090 1300 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 NID2Q14112 1375 aa17.11■□□□□ 0.33
TNFAIP3-204ENST00000433680 SLC15A5A6NIM6 579 aa17.1■□□□□ 0.33
TNFAIP3-204ENST00000433680 GOLGA8BA8MQT2 603 aa17.1■□□□□ 0.33
TNFAIP3-204ENST00000433680 NEK4P51957 841 aa17.1■□□□□ 0.33
TNFAIP3-204ENST00000433680 RTN1Q16799 776 aa17.1■□□□□ 0.33
TNFAIP3-204ENST00000433680 WDR78Q5VTH9 848 aa17.1■□□□□ 0.33
TNFAIP3-204ENST00000433680 CCDC174Q6PII3 467 aa17.1■□□□□ 0.33
TNFAIP3-204ENST00000433680 MTMR8Q96EF0 704 aa17.1■□□□□ 0.33
TNFAIP3-204ENST00000433680 TBC1D32Q96NH3 1257 aa17.1■□□□□ 0.33
TNFAIP3-204ENST00000433680 PLXNB2O15031 1838 aa17.1■□□□□ 0.33
TNFAIP3-204ENST00000433680 ZNF236Q9UL36 1845 aa17.1■□□□□ 0.33
TNFAIP3-204ENST00000433680 GOLGA8AA7E2F4 631 aa17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 FCER1AP12319 257 aa17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 RXRAP19793 462 aa17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 PTPREP23469 700 aa17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 METAP2P50579 478 aaKnown RBP eCLIP17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 CAP1Q01518 475 aa17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 CDC37Q16543 378 aaPredicted RBP17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 CCDC144CPQ8IYA2 1237 aa17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 AGBL1Q96MI9 1066 aa17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 NUDT12Q9BQG2 462 aa17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 CPVLQ9H3G5 476 aa17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 VAT1LQ9HCJ6 419 aa17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 CCPG1Q9ULG6 757 aa17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 NAP1L2Q9ULW6 460 aaPredicted RBP17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 PTPN22Q9Y2R2 807 aa17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 MYH6P13533 1939 aa17.09■□□□□ 0.33
TNFAIP3-204ENST00000433680 ZBTB5O15062 677 aa17.08■□□□□ 0.32
TNFAIP3-204ENST00000433680 ECM2O94769 699 aaPredicted RBP17.08■□□□□ 0.32
TNFAIP3-204ENST00000433680 PDIA3P30101 505 aaKnown RBP17.08■□□□□ 0.32
TNFAIP3-204ENST00000433680 SNAP25P60880 206 aa17.08■□□□□ 0.32
TNFAIP3-204ENST00000433680 IRF5Q13568 498 aa17.08■□□□□ 0.32
TNFAIP3-204ENST00000433680 GRB14Q14449 540 aa17.08■□□□□ 0.32
TNFAIP3-204ENST00000433680 KCTD2Q14681 263 aa17.08■□□□□ 0.32
TNFAIP3-204ENST00000433680 FBXO46Q6PJ61 603 aaPredicted RBP17.08■□□□□ 0.32
TNFAIP3-204ENST00000433680 TMTC3Q6ZXV5 915 aa17.08■□□□□ 0.32
TNFAIP3-204ENST00000433680 KIF2CQ99661 725 aa17.08■□□□□ 0.32
TNFAIP3-204ENST00000433680 MAF1Q9H063 256 aa17.08■□□□□ 0.32
TNFAIP3-204ENST00000433680 ACAD9Q9H845 621 aa17.08■□□□□ 0.32
TNFAIP3-204ENST00000433680 GJD2Q9UKL4 321 aa17.08■□□□□ 0.32
TNFAIP3-204ENST00000433680 RIPK3Q9Y572 518 aa17.08■□□□□ 0.32
TNFAIP3-204ENST00000433680 ABCB11O95342 1321 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 PNMA6FA0A0J9YX94 578 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 CYTH3O43739 400 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 PLEKHA8P1O95397 391 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 XRCC5P13010 732 aaKnown RBP17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 ALAS1P13196 640 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 SLC4A3P48751 1232 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 FLT3LGP49771 235 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 AK2P54819 239 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 PRKCZQ05513 592 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 RABEP1Q15276 862 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 QRICH1Q2TAL8 776 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 MORN1Q5T089 497 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 NBPF11Q86T75 865 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 FBXO11Q86XK2 927 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 RAB11FIP4Q86YS3 637 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 SRBD1Q8N5C6 995 aaKnown RBP17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 RAET1EQ8TD07 263 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 RRP36Q96EU6 259 aaKnown RBP17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 TRERF1Q96PN7 1200 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 MMP19Q99542 508 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 AMNQ9BXJ7 453 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 RNF146Q9NTX7 359 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 SLC5A4Q9NY91 659 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 HPS5Q9UPZ3 1129 aa17.07■□□□□ 0.32
TNFAIP3-204ENST00000433680 RGS2P41220 211 aa17.06■□□□□ 0.32
TNFAIP3-204ENST00000433680 MAP2K5Q13163 448 aa17.06■□□□□ 0.32
TNFAIP3-204ENST00000433680 TRMT44Q8IYL2 757 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms