RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 GALK1P51570 392 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 CASP7P55210 303 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 GALNT18Q6P9A2 607 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 ADAT2Q7Z6V5 191 aaKnown RBP5.53□□□□□ -1.52
CLK1-204ENST00000432425 NLRX1Q86UT6 975 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 SIRT2Q8IXJ6 389 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 ZDHHC15Q96MV8 337 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 SLC26A8Q96RN1 970 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 ERVK13-1Q9NX77 482 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 WHRNQ9P202 907 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 A0A087WZG4 1122 aa5.52□□□□□ -1.53
CLK1-204ENST00000432425 WTIPA6NIX2 430 aaPredicted RBP5.52□□□□□ -1.53
CLK1-204ENST00000432425 NOTOA8MTQ0 251 aa5.52□□□□□ -1.53
CLK1-204ENST00000432425 NFIBO00712 420 aa5.52□□□□□ -1.53
CLK1-204ENST00000432425 CBFA2T2O43439 604 aa5.52□□□□□ -1.53
CLK1-204ENST00000432425 SSBP05455 408 aaKnown RBP eCLIP5.52□□□□□ -1.53
CLK1-204ENST00000432425 RAP1GAPP47736 663 aa5.52□□□□□ -1.53
CLK1-204ENST00000432425 POU4F1Q01851 419 aa5.52□□□□□ -1.53
CLK1-204ENST00000432425 PPP2R5DQ14738 602 aa5.52□□□□□ -1.53
CLK1-204ENST00000432425 RTP2Q5QGT7 225 aa5.52□□□□□ -1.53
CLK1-204ENST00000432425 ZNF605Q86T29 641 aa5.52□□□□□ -1.53
CLK1-204ENST00000432425 SHISA4Q96DD7 197 aa5.52□□□□□ -1.53
CLK1-204ENST00000432425 SLC12A9Q9BXP2 914 aa5.52□□□□□ -1.53
CLK1-204ENST00000432425 KCNK12Q9HB15 430 aa5.52□□□□□ -1.53
CLK1-204ENST00000432425 CRTAC1Q9NQ79 661 aa5.52□□□□□ -1.53
CLK1-204ENST00000432425 OR14I1A6ND48 311 aa5.51□□□□□ -1.53
CLK1-204ENST00000432425 PPM1BO75688 479 aa5.51□□□□□ -1.53
CLK1-204ENST00000432425 TSPAN15O95858 294 aa5.51□□□□□ -1.53
CLK1-204ENST00000432425 CD3EP07766 207 aa5.51□□□□□ -1.53
CLK1-204ENST00000432425 TMEM253P0C7T8 217 aa5.51□□□□□ -1.53
CLK1-204ENST00000432425 HSF5Q4G112 596 aaPredicted RBP5.51□□□□□ -1.53
CLK1-204ENST00000432425 ADGRF1Q5T601 910 aa5.51□□□□□ -1.53
CLK1-204ENST00000432425 VHLLQ6RSH7 139 aa5.51□□□□□ -1.53
CLK1-204ENST00000432425 FAM169BQ8N8A8 192 aa5.51□□□□□ -1.53
CLK1-204ENST00000432425 ADCY4Q8NFM4 1077 aa5.51□□□□□ -1.53
CLK1-204ENST00000432425 KLHL25Q9H0H3 589 aa5.51□□□□□ -1.53
CLK1-204ENST00000432425 DIS3Q9Y2L1 958 aaKnown RBP5.51□□□□□ -1.53
CLK1-204ENST00000432425 A0A1W2PQ45 241 aaPredicted RBP5.5□□□□□ -1.53
CLK1-204ENST00000432425 A0A1W2PQY0 241 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 DBX1A6NMT0 343 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 EPHX1P07099 455 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 KIAA1211LQ6NV74 962 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 SLCO6A1Q86UG4 719 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 KLHL6Q8WZ60 621 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 FGD4Q96M96 766 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 SUGT1Q9Y2Z0 365 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 A0A1W2PQ27 194 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 A0A1W2PQ64 194 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 A0A1W2PQC6 194 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 A0A1W2PQD8 194 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 EFEMP2O95967 443 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 NAT2P11245 290 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 PNLIPP16233 465 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 ARL4AP40617 200 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 TNNI3KQ59H18 835 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 HLA-DQA1Q5Y7H0 255 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 TMEM132EQ6IEE7 984 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 CYP2R1Q6VVX0 501 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 JAMLQ86YT9 394 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 PLCD4Q9BRC7 762 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.5□□□□□ -1.538e-10■■□□□ 13.9
CLK1-204ENST00000432425 MRVI1Q9Y6F6 885 aa5.5□□□□□ -1.53
CLK1-204ENST00000432425 PRKCAP17252 672 aa5.49□□□□□ -1.53
CLK1-204ENST00000432425 LAPTM5Q13571 262 aa5.49□□□□□ -1.53
CLK1-204ENST00000432425 ANKLE2Q86XL3 938 aa5.49□□□□□ -1.53
CLK1-204ENST00000432425 NUP43Q8NFH3 380 aa5.49□□□□□ -1.53
CLK1-204ENST00000432425 KCNN1Q92952 543 aa5.49□□□□□ -1.53
CLK1-204ENST00000432425 FCRL3Q96P31 734 aaPredicted RBP5.49□□□□□ -1.53
CLK1-204ENST00000432425 ZNF552Q9H707 407 aaPredicted RBP5.49□□□□□ -1.53
CLK1-204ENST00000432425 ACTR10Q9NZ32 417 aa5.49□□□□□ -1.53
CLK1-204ENST00000432425 ANKRD34BA5PLL1 514 aa5.48□□□□□ -1.53
CLK1-204ENST00000432425 TCAF2A6NFQ2 919 aa5.48□□□□□ -1.53
CLK1-204ENST00000432425 E9PSI1 815 aa5.48□□□□□ -1.53
CLK1-204ENST00000432425 SMAD7O15105 426 aaKnown RBP5.48□□□□□ -1.53
CLK1-204ENST00000432425 FGF10O15520 208 aaPredicted RBP5.48□□□□□ -1.53
CLK1-204ENST00000432425 PEX10O60683 326 aa5.48□□□□□ -1.53
CLK1-204ENST00000432425 C1QTNF9P0C862 333 aa5.48□□□□□ -1.53
CLK1-204ENST00000432425 IFNGR1P15260 489 aa5.48□□□□□ -1.53
CLK1-204ENST00000432425 JAG1P78504 1218 aa5.48□□□□□ -1.53
CLK1-204ENST00000432425 CYP4F8P98187 520 aa5.48□□□□□ -1.53
CLK1-204ENST00000432425 ARID5AQ03989 594 aa5.48□□□□□ -1.53
CLK1-204ENST00000432425 NCAPHQ15003 741 aa5.48□□□□□ -1.53
CLK1-204ENST00000432425 JMJD8Q96S16 334 aa5.48□□□□□ -1.53
CLK1-204ENST00000432425 MCOLN1Q9GZU1 580 aa5.48□□□□□ -1.53
CLK1-204ENST00000432425 CGGBP1Q9UFW8 167 aaPredicted RBP5.48□□□□□ -1.53
CLK1-204ENST00000432425 ETV2O00321 342 aaPredicted RBP5.47□□□□□ -1.53
CLK1-204ENST00000432425 SEMA7AO75326 666 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 TBC1D8O95759 1140 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 GLDCP23378 1020 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 AMPD2Q01433 879 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 FZD5Q13467 585 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 DPY19L1Q2PZI1 675 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 LARP1BQ659C4 914 aaKnown RBP5.47□□□□□ -1.53
CLK1-204ENST00000432425 OLFML2BQ68BL8 750 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 ATG14Q6ZNE5 492 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 CRACR2BQ8N4Y2 399 aaPredicted RBP5.47□□□□□ -1.53
CLK1-204ENST00000432425 TMEM52Q8NDY8 209 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 TOX2Q96NM4 488 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 PTCHD1Q96NR3 888 aa5.47□□□□□ -1.53
CLK1-204ENST00000432425 APBA2Q99767 749 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms