RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 GLT1D1Q96MS3 346 aa16.08■□□□□ 0.16
GCSHP3-201ENST00000431120 SEC62Q99442 399 aaKnown RBP16.08■□□□□ 0.16
GCSHP3-201ENST00000431120 ACAD9Q9H845 621 aa16.08■□□□□ 0.16
GCSHP3-201ENST00000431120 ZHX1Q9UKY1 873 aaPredicted RBP16.08■□□□□ 0.16
GCSHP3-201ENST00000431120 LAMA2P24043 3122 aaKnown RBP16.08■□□□□ 0.16
GCSHP3-201ENST00000431120 TMEM265A0A087WTH1 108 aa16.07■□□□□ 0.16
GCSHP3-201ENST00000431120 TMEM232C9JQI7 657 aa16.07■□□□□ 0.16
GCSHP3-201ENST00000431120 RAG1P15918 1043 aa16.07■□□□□ 0.16
GCSHP3-201ENST00000431120 SLC1A4P43007 532 aa16.07■□□□□ 0.16
GCSHP3-201ENST00000431120 GJA9P57773 515 aa16.07■□□□□ 0.16
GCSHP3-201ENST00000431120 NKX3-2P78367 333 aa16.07■□□□□ 0.16
GCSHP3-201ENST00000431120 KCNA10Q16322 511 aa16.07■□□□□ 0.16
GCSHP3-201ENST00000431120 C9orf50Q5SZB4 431 aa16.07■□□□□ 0.16
GCSHP3-201ENST00000431120 GUCD1Q96NT3 240 aa16.07■□□□□ 0.16
GCSHP3-201ENST00000431120 UPF3AQ9H1J1 476 aaKnown RBP16.07■□□□□ 0.16
GCSHP3-201ENST00000431120 TMEM39AQ9NV64 488 aa16.07■□□□□ 0.16
GCSHP3-201ENST00000431120 ANAPC4Q9UJX5 808 aa16.07■□□□□ 0.16
GCSHP3-201ENST00000431120 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
GCSHP3-201ENST00000431120 SALL3Q9BXA9 1300 aa16.06■□□□□ 0.16
GCSHP3-201ENST00000431120 ASB14A6NK59 587 aa16.06■□□□□ 0.16
GCSHP3-201ENST00000431120 TSPY2A6NKD2 308 aa16.06■□□□□ 0.16
GCSHP3-201ENST00000431120 PQBP1O60828 265 aaKnown RBP16.06■□□□□ 0.16
GCSHP3-201ENST00000431120 SLC4A3P48751 1232 aa16.06■□□□□ 0.16
GCSHP3-201ENST00000431120 CCDC144BQ3MJ40 725 aa16.06■□□□□ 0.16
GCSHP3-201ENST00000431120 RCSD1Q6JBY9 416 aa16.06■□□□□ 0.16
GCSHP3-201ENST00000431120 ARMCX2Q7L311 632 aa16.06■□□□□ 0.16
GCSHP3-201ENST00000431120 FAM133AQ8N9E0 248 aa16.06■□□□□ 0.16
GCSHP3-201ENST00000431120 EVI5LQ96CN4 794 aa16.06■□□□□ 0.16
GCSHP3-201ENST00000431120 FGD4Q96M96 766 aa16.06■□□□□ 0.16
GCSHP3-201ENST00000431120 ORC4O43929 436 aa16.05■□□□□ 0.16
GCSHP3-201ENST00000431120 C6orf222P0C671 652 aaPredicted RBP16.05■□□□□ 0.16
GCSHP3-201ENST00000431120 NOVP48745 357 aa16.05■□□□□ 0.16
GCSHP3-201ENST00000431120 FPGSQ05932 587 aa16.05■□□□□ 0.16
GCSHP3-201ENST00000431120 FAAP100Q0VG06 881 aa16.05■□□□□ 0.16
GCSHP3-201ENST00000431120 IKQ13123 557 aaPredicted RBP16.05■□□□□ 0.16
GCSHP3-201ENST00000431120 ALX1Q15699 326 aa16.05■□□□□ 0.16
GCSHP3-201ENST00000431120 OTUD7AQ8TE49 926 aaPredicted RBP16.05■□□□□ 0.16
GCSHP3-201ENST00000431120 LENG1Q96BZ8 264 aaPredicted RBP16.05■□□□□ 0.16
GCSHP3-201ENST00000431120 SEZ6LQ9BYH1 1024 aa16.05■□□□□ 0.16
GCSHP3-201ENST00000431120 HELLSQ9NRZ9 838 aa16.05■□□□□ 0.16
GCSHP3-201ENST00000431120 STX8Q9UNK0 236 aa16.05■□□□□ 0.16
GCSHP3-201ENST00000431120 ZNF536O15090 1300 aa16.04■□□□□ 0.16
GCSHP3-201ENST00000431120 TIMP1P01033 207 aa16.04■□□□□ 0.16
GCSHP3-201ENST00000431120 ASGR1P07306 291 aa16.04■□□□□ 0.16
GCSHP3-201ENST00000431120 FGRP09769 529 aa16.04■□□□□ 0.16
GCSHP3-201ENST00000431120 MCCP23508 829 aa16.04■□□□□ 0.16
GCSHP3-201ENST00000431120 ITGB8P26012 769 aa16.04■□□□□ 0.16
GCSHP3-201ENST00000431120 CDK7P50613 346 aa16.04■□□□□ 0.16
GCSHP3-201ENST00000431120 CCDC174Q6PII3 467 aa16.04■□□□□ 0.16
GCSHP3-201ENST00000431120 CCDC144CPQ8IYA2 1237 aa16.04■□□□□ 0.16
GCSHP3-201ENST00000431120 KATNBL1Q9H079 304 aa16.04■□□□□ 0.16
GCSHP3-201ENST00000431120 SEMA6BQ9H3T3 888 aa16.04■□□□□ 0.16
GCSHP3-201ENST00000431120 A1CFQ9NQ94 594 aaKnown RBP16.04■□□□□ 0.16
GCSHP3-201ENST00000431120 RNF146Q9NTX7 359 aa16.04■□□□□ 0.16
GCSHP3-201ENST00000431120 ISY1Q9ULR0 285 aaKnown RBP16.04■□□□□ 0.16
GCSHP3-201ENST00000431120 A0A0U1RQG5 324 aaPredicted RBP16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 FOXP2O15409 715 aa16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 CABYRO75952 493 aa16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 HDAC1Q13547 482 aaPredicted RBP16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 AAMPQ13685 434 aa16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 GNASQ5JWF2 1037 aa16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 ANKRD45Q5TZF3 282 aa16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 CCDC129Q6ZRS4 1044 aa16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 DCAF4Q8WV16 495 aa16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 RNPC3Q96LT9 517 aaKnown RBP16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 TRERF1Q96PN7 1200 aa16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 IL17RBQ9NRM6 502 aa16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 HOMER2Q9NSB8 354 aa16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 TBX21Q9UL17 535 aa16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 PNMA2Q9UL42 364 aa16.03■□□□□ 0.16
GCSHP3-201ENST00000431120 LOC102724159A0A0B4J2E5 919 aa16.02■□□□□ 0.16
GCSHP3-201ENST00000431120 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.02■□□□□ 0.16
GCSHP3-201ENST00000431120 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.02■□□□□ 0.16
GCSHP3-201ENST00000431120 ARVCFO00192 962 aa16.02■□□□□ 0.16
GCSHP3-201ENST00000431120 RANBP6O60518 1105 aaKnown RBP16.02■□□□□ 0.16
GCSHP3-201ENST00000431120 PCP11498 1178 aaKnown RBP16.02■□□□□ 0.16
GCSHP3-201ENST00000431120 RRP1P56182 461 aaKnown RBP16.02■□□□□ 0.16
GCSHP3-201ENST00000431120 TNFAIP2Q03169 654 aa16.02■□□□□ 0.16
GCSHP3-201ENST00000431120 PWP2Q15269 919 aaKnown RBP16.02■□□□□ 0.16
GCSHP3-201ENST00000431120 MFSD5Q6N075 450 aa16.02■□□□□ 0.16
GCSHP3-201ENST00000431120 AGBL1Q96MI9 1066 aa16.02■□□□□ 0.16
GCSHP3-201ENST00000431120 CDX2Q99626 313 aaPredicted RBP16.02■□□□□ 0.16
GCSHP3-201ENST00000431120 PRR12Q9ULL5 1215 aa16.02■□□□□ 0.16
GCSHP3-201ENST00000431120 Q9Y3F1 56 aa16.02■□□□□ 0.16
GCSHP3-201ENST00000431120 ZMYM6O95789 1325 aa16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 MYADML2A6NDP7 307 aa16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 TLR3O15455 904 aaKnown RBP16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 ADCY6O43306 1168 aa16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 ZEB2O60315 1214 aa16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 ALAS1P13196 640 aa16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 NT5C2P49902 561 aa16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 PDE1AP54750 535 aa16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 CNTN2Q02246 1040 aa16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 CTDSPL2Q05D32 466 aa16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 PPIGQ13427 754 aaKnown RBP eCLIP16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 IQSEC1Q6DN90 963 aa16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 BTNL9Q6UXG8 535 aa16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 KCTD1Q719H9 257 aa16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.01■□□□□ 0.15
GCSHP3-201ENST00000431120 VTI1AQ96AJ9 217 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms