RNA–Protein interactions for RNA: ENST00000431020.1

LINC00309-201, long intergenic non-protein coding RNA 309, humanhuman

TSL 1 (best) BASIC

Gene LINC00309, Length 3,307 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00309-201ENST00000431020 PCDHA1Q9Y5I3 950 aa6.9□□□□□ -1.31
LINC00309-201ENST00000431020 ATRNL1Q5VV63 1379 aa6.9□□□□□ -1.31
LINC00309-201ENST00000431020 CXCL11O14625 94 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 TBC1D12O60347 775 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 ZBED4O75132 1171 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 MAP2K2P36507 400 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 CAP1Q01518 475 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 CNTN2Q02246 1040 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 PRKCZQ05513 592 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 CCL14Q16627 93 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 APOA5Q6Q788 366 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 RUFY3Q7L099 469 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 ADGRF4Q8IZF3 695 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 PRPF38AQ8NAV1 312 aaKnown RBP6.89□□□□□ -1.31
LINC00309-201ENST00000431020 GPRC5AQ8NFJ5 357 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 LENG1Q96BZ8 264 aaPredicted RBP6.89□□□□□ -1.31
LINC00309-201ENST00000431020 VPS54Q9P1Q0 977 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 ZHX1Q9UKY1 873 aaPredicted RBP6.89□□□□□ -1.31
LINC00309-201ENST00000431020 PNMA3Q9UL41 463 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 GABRQQ9UN88 632 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.89□□□□□ -1.31
LINC00309-201ENST00000431020 A0A1B0GUL6 1792 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 SPDYE16A6NNV3 312 aaPredicted RBP6.89□□□□□ -1.31
LINC00309-201ENST00000431020 C19orf81C9J6K1 198 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 NFIBO00712 420 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 CA12O43570 354 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 TLR2O60603 784 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 EIF2AK2P19525 551 aaKnown RBP6.89□□□□□ -1.31
LINC00309-201ENST00000431020 RPS6KB1P23443 525 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 CDC27P30260 824 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 PABPC4Q13310 644 aaKnown RBP eCLIP6.89□□□□□ -1.31
LINC00309-201ENST00000431020 KRT32Q14532 448 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 KCTD2Q14681 263 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 TMEM132BQ14DG7 1078 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 GJC2Q5T442 439 aaPredicted RBP6.89□□□□□ -1.31
LINC00309-201ENST00000431020 JAKMIP3Q5VZ66 844 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 MB21D2Q8IYB1 491 aaPredicted RBP6.89□□□□□ -1.31
LINC00309-201ENST00000431020 KCTD17Q8N5Z5 321 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 FAM184AQ8NB25 1140 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 FANCBQ8NB91 859 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 KIAA1683Q9H0B3 1180 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 WBP1LQ9NX94 342 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 HOXC10Q9NYD6 342 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 ZNF112Q9UJU3 913 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 TPCN1Q9ULQ1 816 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 KCNJ14Q9UNX9 436 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 RPAP1Q9BWH6 1393 aaPredicted RBP6.89□□□□□ -1.31
LINC00309-201ENST00000431020 WDR90Q96KV7 1748 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 A0A0G2JLL6 359 aaPredicted RBP6.89□□□□□ -1.31
LINC00309-201ENST00000431020 VPS37CA5D8V6 355 aaPredicted RBP6.89□□□□□ -1.31
LINC00309-201ENST00000431020 MMP14P50281 582 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 ALX1Q15699 326 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 CDC37Q16543 378 aaPredicted RBP6.89□□□□□ -1.31
LINC00309-201ENST00000431020 UBE2SQ16763 222 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 SLC9C1Q4G0N8 1177 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 PRRT2Q7Z6L0 340 aaPredicted RBP6.89□□□□□ -1.31
LINC00309-201ENST00000431020 TNS4Q8IZW8 715 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 IGDCC4Q8TDY8 1250 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 CHURC1Q8WUH1 139 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 LY9Q9HBG7 655 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 RNF146Q9NTX7 359 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 RBPJLQ9UBG7 517 aa6.89□□□□□ -1.31
LINC00309-201ENST00000431020 EYSQ5T1H1 3165 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 ST18O60284 1047 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 NAPAP54920 295 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 ERVK-9P63128 1117 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 ERVK-24P63145 666 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 TRIM32Q13049 653 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 SYDE2Q5VT97 1194 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 TRERF1Q96PN7 1200 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 MOV10L1Q9BXT6 1211 aaKnown RBP6.88□□□□□ -1.31
LINC00309-201ENST00000431020 VWA5AO00534 786 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 ORC4O43929 436 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 FKTNO75072 461 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 IRX5P78411 483 aaPredicted RBP6.88□□□□□ -1.31
LINC00309-201ENST00000431020 QRICH1Q2TAL8 776 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 MUM1L1Q5H9M0 696 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 GPAT2Q6NUI2 795 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 FERMT2Q96AC1 680 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 TRIM47Q96LD4 638 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 NYAP2Q9P242 653 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 DDX39AO00148 427 aaKnown RBP6.88□□□□□ -1.31
LINC00309-201ENST00000431020 MARCH6O60337 910 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 BAATQ14032 418 aaPredicted RBP6.88□□□□□ -1.31
LINC00309-201ENST00000431020 ME3Q16798 604 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 CATSPERGQ6ZRH7 1159 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 SEPT14Q6ZU15 432 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 SRBD1Q8N5C6 995 aaKnown RBP6.88□□□□□ -1.31
LINC00309-201ENST00000431020 SPATC1LQ9H0A9 340 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 RNF208Q9H0X6 261 aa6.88□□□□□ -1.31
LINC00309-201ENST00000431020 SH2B2O14492 632 aaPredicted RBP6.87□□□□□ -1.31
LINC00309-201ENST00000431020 WDR46O15213 610 aaKnown RBP6.87□□□□□ -1.31
LINC00309-201ENST00000431020 KIF5BP33176 963 aa6.87□□□□□ -1.31
LINC00309-201ENST00000431020 CTCFP49711 727 aaPredicted RBP6.87□□□□□ -1.31
LINC00309-201ENST00000431020 ATN1P54259 1190 aaPredicted RBP6.87□□□□□ -1.31
LINC00309-201ENST00000431020 C1QBPQ07021 282 aaKnown RBP6.87□□□□□ -1.31
LINC00309-201ENST00000431020 ZNF543Q08ER8 600 aa6.87□□□□□ -1.31
LINC00309-201ENST00000431020 MTFR1Q15390 333 aa6.87□□□□□ -1.31
LINC00309-201ENST00000431020 CPLX2Q6PUV4 134 aaKnown RBP6.87□□□□□ -1.31
LINC00309-201ENST00000431020 DGKHQ86XP1 1220 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms