RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 CERKLQ49MI3 558 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-212ENST00000430617 HSP90AB4PQ58FF6 505 aa12.13□□□□□ -0.47
ATG4B-212ENST00000430617 ANKRD45Q5TZF3 282 aa12.13□□□□□ -0.47
ATG4B-212ENST00000430617 HFE2Q6ZVN8 426 aa12.13□□□□□ -0.47
ATG4B-212ENST00000430617 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-212ENST00000430617 SCLYQ96I15 445 aa12.13□□□□□ -0.47
ATG4B-212ENST00000430617 LRRCC1Q9C099 1032 aa12.13□□□□□ -0.47
ATG4B-212ENST00000430617 ZFHX2Q9C0A1 2572 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-212ENST00000430617 NLRC5Q86WI3 1866 aa12.12□□□□□ -0.47
ATG4B-212ENST00000430617 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
ATG4B-212ENST00000430617 SMARCA5O60264 1052 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-212ENST00000430617 DUSP11O75319 330 aaKnown RBP12.12□□□□□ -0.47
ATG4B-212ENST00000430617 PLCG2P16885 1265 aa12.12□□□□□ -0.47
ATG4B-212ENST00000430617 ARID4AP29374 1257 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-212ENST00000430617 SHMT1P34896 483 aa12.12□□□□□ -0.47
ATG4B-212ENST00000430617 SEPT2Q15019 361 aa12.12□□□□□ -0.47
ATG4B-212ENST00000430617 NAA16Q6N069 864 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-212ENST00000430617 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
ATG4B-212ENST00000430617 ERC1Q8IUD2 1116 aa12.12□□□□□ -0.47
ATG4B-212ENST00000430617 MB21D1Q8N884 522 aa12.12□□□□□ -0.47
ATG4B-212ENST00000430617 RHPN1Q8TCX5 695 aa12.12□□□□□ -0.47
ATG4B-212ENST00000430617 KIF1BPQ96EK5 621 aa12.12□□□□□ -0.47
ATG4B-212ENST00000430617 NEUROD6Q96NK8 337 aa12.12□□□□□ -0.47
ATG4B-212ENST00000430617 NOC4LQ9BVI4 516 aaKnown RBP12.12□□□□□ -0.47
ATG4B-212ENST00000430617 FAM184BQ9ULE4 1060 aa12.12□□□□□ -0.47
ATG4B-212ENST00000430617 CNPY2Q9Y2B0 182 aa12.12□□□□□ -0.47
ATG4B-212ENST00000430617 DIS3Q9Y2L1 958 aaKnown RBP12.12□□□□□ -0.47
ATG4B-212ENST00000430617 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-212ENST00000430617 FLOT1O75955 427 aa12.11□□□□□ -0.47
ATG4B-212ENST00000430617 EVX2Q03828 476 aa12.11□□□□□ -0.47
ATG4B-212ENST00000430617 SAMD1Q6SPF0 538 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-212ENST00000430617 SLC43A3Q8NBI5 491 aa12.11□□□□□ -0.47
ATG4B-212ENST00000430617 PCSK9Q8NBP7 692 aaKnown RBP12.11□□□□□ -0.47
ATG4B-212ENST00000430617 PRSS33Q8NF86 280 aa12.11□□□□□ -0.47
ATG4B-212ENST00000430617 AGBL1Q96MI9 1066 aa12.11□□□□□ -0.47
ATG4B-212ENST00000430617 TRPV6Q9H1D0 765 aa12.11□□□□□ -0.47
ATG4B-212ENST00000430617 UPF3AQ9H1J1 476 aaKnown RBP12.11□□□□□ -0.47
ATG4B-212ENST00000430617 UBE2ZQ9H832 354 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-212ENST00000430617 SNRKQ9NRH2 765 aa12.11□□□□□ -0.47
ATG4B-212ENST00000430617 SERPINB13Q9UIV8 391 aa12.11□□□□□ -0.47
ATG4B-212ENST00000430617 GRIN2DO15399 1336 aa12.11□□□□□ -0.47
ATG4B-212ENST00000430617 DMDP11532 3685 aa12.1□□□□□ -0.47
ATG4B-212ENST00000430617 LCTP09848 1927 aa12.1□□□□□ -0.47
ATG4B-212ENST00000430617 DCXO43602 365 aa12.1□□□□□ -0.47
ATG4B-212ENST00000430617 GJA9P57773 515 aa12.1□□□□□ -0.47
ATG4B-212ENST00000430617 BEX3Q00994 111 aa12.1□□□□□ -0.47
ATG4B-212ENST00000430617 KCTD2Q14681 263 aa12.1□□□□□ -0.47
ATG4B-212ENST00000430617 LEXMQ3ZCV2 418 aa12.1□□□□□ -0.47
ATG4B-212ENST00000430617 GNASQ5JWF2 1037 aa12.1□□□□□ -0.47
ATG4B-212ENST00000430617 OTUD7AQ8TE49 926 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-212ENST00000430617 EHD4Q9H223 541 aa12.1□□□□□ -0.47
ATG4B-212ENST00000430617 ZHX1Q9UKY1 873 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-212ENST00000430617 MYH4Q9Y623 1939 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 VPS13AQ96RL7 3174 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 MYO7AQ13402 2215 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 B4GALT4O60513 344 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 SLC25A27O95847 323 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 KCNA5P22460 613 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 FOXK2Q01167 660 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 CCDC144BQ3MJ40 725 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 PTCRAQ6ISU1 281 aaPredicted RBP12.09□□□□□ -0.47
ATG4B-212ENST00000430617 CXCL17Q6UXB2 119 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 RIOX2Q8IUF8 465 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 PLEKHM2Q8IWE5 1019 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 RPUSD2Q8IZ73 545 aaKnown RBP12.09□□□□□ -0.47
ATG4B-212ENST00000430617 SPICE1Q8N0Z3 855 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 GDPD5Q8WTR4 605 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 IL1RAPL2Q9NP60 686 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 CABP5Q9NP86 173 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 ADAMTS5Q9UNA0 930 aa12.09□□□□□ -0.47
ATG4B-212ENST00000430617 PTPRZ1P23471 2315 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-212ENST00000430617 PTGS1P23219 599 aa12.08□□□□□ -0.48
ATG4B-212ENST00000430617 PLCD1P51178 756 aa12.08□□□□□ -0.48
ATG4B-212ENST00000430617 G3BP1Q13283 466 aaKnown RBP eCLIP12.08□□□□□ -0.48
ATG4B-212ENST00000430617 OS9Q13438 667 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-212ENST00000430617 IER5LQ5T953 404 aa12.08□□□□□ -0.48
ATG4B-212ENST00000430617 MAMDC4Q6UXC1 1216 aa12.08□□□□□ -0.48
ATG4B-212ENST00000430617 DEFB128Q7Z7B8 93 aa12.08□□□□□ -0.48
ATG4B-212ENST00000430617 CLEC10AQ8IUN9 316 aa12.08□□□□□ -0.48
ATG4B-212ENST00000430617 SIAH1Q8IUQ4 282 aa12.08□□□□□ -0.48
ATG4B-212ENST00000430617 AKAP2Q9Y2D5 859 aa12.08□□□□□ -0.48
ATG4B-212ENST00000430617 ASTN1O14525 1302 aa12.08□□□□□ -0.48
ATG4B-212ENST00000430617 LCHNA4D1U4 455 aa12.07□□□□□ -0.48
ATG4B-212ENST00000430617 GRXCR2A6NFK2 248 aa12.07□□□□□ -0.48
ATG4B-212ENST00000430617 CACNA1BQ00975 2339 aa12.07□□□□□ -0.48
ATG4B-212ENST00000430617 ITGA7Q13683 1181 aa12.07□□□□□ -0.48
ATG4B-212ENST00000430617 ACVR2BQ13705 512 aa12.07□□□□□ -0.48
ATG4B-212ENST00000430617 GORABQ5T7V8 394 aa12.07□□□□□ -0.48
ATG4B-212ENST00000430617 OSBPL3Q9H4L5 887 aa12.07□□□□□ -0.48
ATG4B-212ENST00000430617 FBXO28Q9NVF7 368 aa12.07□□□□□ -0.48
ATG4B-212ENST00000430617 SCN10AQ9Y5Y9 1956 aa12.07□□□□□ -0.48
ATG4B-212ENST00000430617 CACNA1HO95180 2353 aa12.06□□□□□ -0.48
ATG4B-212ENST00000430617 DNAJC25-GNG10A0A024R161 153 aa12.06□□□□□ -0.48
ATG4B-212ENST00000430617 MPHOSPH10O00566 681 aaKnown RBP12.06□□□□□ -0.48
ATG4B-212ENST00000430617 CYP2E1P05181 493 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-212ENST00000430617 GSPT1P15170 499 aaKnown RBP12.06□□□□□ -0.48
ATG4B-212ENST00000430617 MX1P20591 662 aa12.06□□□□□ -0.48
ATG4B-212ENST00000430617 STAT3P40763 770 aa12.06□□□□□ -0.48
ATG4B-212ENST00000430617 PSMC6P62333 389 aa12.06□□□□□ -0.48
ATG4B-212ENST00000430617 TNNI3KQ59H18 835 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms