RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 COL1A1P02452 1464 aaPredicted RBP16.86■□□□□ 0.29
LINC00839-202ENST00000429940 PFKFB3Q16875 520 aaPredicted RBP16.86■□□□□ 0.29
LINC00839-202ENST00000429940 TSR1Q2NL82 804 aaKnown RBP16.86■□□□□ 0.29
LINC00839-202ENST00000429940 ZNF831Q5JPB2 1677 aa16.86■□□□□ 0.29
LINC00839-202ENST00000429940 ADSSL1Q8N142 457 aa16.86■□□□□ 0.29
LINC00839-202ENST00000429940 RREB1Q92766 1687 aa16.86■□□□□ 0.29
LINC00839-202ENST00000429940 ARHGEF1Q92888 912 aaKnown RBP16.86■□□□□ 0.29
LINC00839-202ENST00000429940 DNAJC7Q99615 494 aa16.86■□□□□ 0.29
LINC00839-202ENST00000429940 MED4Q9NPJ6 270 aa16.86■□□□□ 0.29
LINC00839-202ENST00000429940 HDAC6Q9UBN7 1215 aa16.86■□□□□ 0.29
LINC00839-202ENST00000429940 LCMT1Q9UIC8 334 aa16.86■□□□□ 0.29
LINC00839-202ENST00000429940 USP17L12C9JPN9 530 aa16.86■□□□□ 0.29
LINC00839-202ENST00000429940 USP17L21D6R901 530 aa16.86■□□□□ 0.29
LINC00839-202ENST00000429940 PHACTR2O75167 634 aa16.86■□□□□ 0.29
LINC00839-202ENST00000429940 RPS6KA4O75676 772 aa16.86■□□□□ 0.29
LINC00839-202ENST00000429940 IVLP07476 585 aa16.86■□□□□ 0.29
LINC00839-202ENST00000429940 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
LINC00839-202ENST00000429940 RTCBQ9Y3I0 505 aaKnown RBP16.86■□□□□ 0.29
LINC00839-202ENST00000429940 A0A1W2PQC6 194 aa16.85■□□□□ 0.29
LINC00839-202ENST00000429940 MYO1CO00159 1063 aa16.85■□□□□ 0.29
LINC00839-202ENST00000429940 VEGFAP15692 232 aaPredicted RBP16.85■□□□□ 0.29
LINC00839-202ENST00000429940 EEF1GP26641 437 aaKnown RBP16.85■□□□□ 0.29
LINC00839-202ENST00000429940 USP14P54578 494 aa16.85■□□□□ 0.29
LINC00839-202ENST00000429940 HERVK_113P62684 666 aa16.85■□□□□ 0.29
LINC00839-202ENST00000429940 PARP10Q53GL7 1025 aa16.85■□□□□ 0.29
LINC00839-202ENST00000429940 CCDC122Q5T0U0 273 aa16.85■□□□□ 0.29
LINC00839-202ENST00000429940 CAPN11Q9UMQ6 739 aa16.85■□□□□ 0.29
LINC00839-202ENST00000429940 PDS5AQ29RF7 1337 aaKnown RBP16.85■□□□□ 0.29
LINC00839-202ENST00000429940 ATP1A1P05023 1023 aaKnown RBP16.85■□□□□ 0.29
LINC00839-202ENST00000429940 PMS1P54277 932 aaKnown RBP16.85■□□□□ 0.29
LINC00839-202ENST00000429940 FAM47AQ5JRC9 791 aa16.85■□□□□ 0.29
LINC00839-202ENST00000429940 RC3H1Q5TC82 1133 aaKnown RBP16.85■□□□□ 0.29
LINC00839-202ENST00000429940 SRLQ86TD4 932 aa16.85■□□□□ 0.29
LINC00839-202ENST00000429940 C4orf32Q8N8J7 132 aa16.85■□□□□ 0.29
LINC00839-202ENST00000429940 DISC1Q9NRI5 854 aa16.85■□□□□ 0.29
LINC00839-202ENST00000429940 TFR2Q9UP52 801 aa16.85■□□□□ 0.29
LINC00839-202ENST00000429940 NIP7Q9Y221 180 aaKnown RBP eCLIP16.85■□□□□ 0.29
LINC00839-202ENST00000429940 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.85■□□□□ 0.29
LINC00839-202ENST00000429940 SAR1BQ9Y6B6 198 aa16.85■□□□□ 0.29
LINC00839-202ENST00000429940 A0A1B0GUL6 1792 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 MCM3P25205 808 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 EVX2Q03828 476 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 WDR59Q6PJI9 974 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 RASSF8Q8NHQ8 419 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 ZNF507Q8TCN5 953 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 MMS19Q96T76 1030 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 RASSF4Q9H2L5 321 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 COL4A1P02462 1669 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 WTIPA6NIX2 430 aaPredicted RBP16.84■□□□□ 0.29
LINC00839-202ENST00000429940 ORC4O43929 436 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 RPS6KA5O75582 802 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 NTSR2O95665 410 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 CALML3P27482 149 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 TNNT3P45378 269 aaPredicted RBP16.84■□□□□ 0.29
LINC00839-202ENST00000429940 KRT83P78385 493 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 KIAA1328Q86T90 577 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 C10orf67Q8IYJ2 551 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 BLIDQ8IZY5 108 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 TRIM47Q96LD4 638 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 TRIM34Q9BYJ4 488 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 THAP9Q9H5L6 903 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 VIPAS39Q9H9C1 493 aa16.84■□□□□ 0.29
LINC00839-202ENST00000429940 MAGEC2Q9UBF1 373 aaPredicted RBP16.84■□□□□ 0.29
LINC00839-202ENST00000429940 RRP15Q9Y3B9 282 aaKnown RBP16.84■□□□□ 0.29
LINC00839-202ENST00000429940 LAMB2P55268 1798 aa16.83■□□□□ 0.28
LINC00839-202ENST00000429940 SRGAP2O75044 1071 aa16.83■□□□□ 0.28
LINC00839-202ENST00000429940 STIM1Q13586 685 aa16.83■□□□□ 0.28
LINC00839-202ENST00000429940 MAP9Q49MG5 647 aa16.83■□□□□ 0.28
LINC00839-202ENST00000429940 PAPD7Q5XG87 772 aaKnown RBP16.83■□□□□ 0.28
LINC00839-202ENST00000429940 EHBP1Q8NDI1 1231 aa16.83■□□□□ 0.28
LINC00839-202ENST00000429940 ZNF384Q8TF68 577 aa16.83■□□□□ 0.28
LINC00839-202ENST00000429940 FAM204AQ9H8W3 233 aa16.83■□□□□ 0.28
LINC00839-202ENST00000429940 TRIM66O15016 1216 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 KCNB1Q14721 858 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 NAALADL2Q58DX5 795 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 DTHD1Q6ZMT9 781 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 JAKMIP2Q96AA8 810 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 CAPZA3Q96KX2 299 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 FAM205AQ6ZU69 1335 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.82■□□□□ 0.28
LINC00839-202ENST00000429940 B4DLN1 442 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 PSMA7O14818 248 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 KRT86O43790 486 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 KIF5BP33176 963 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 DNM2P50570 870 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 CKAP4Q07065 602 aaKnown RBP16.82■□□□□ 0.28
LINC00839-202ENST00000429940 TBC1D9BQ66K14 1250 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 CCDC24Q8N4L8 307 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 RPGRIP1Q96KN7 1286 aa16.82■□□□□ 0.28
LINC00839-202ENST00000429940 PP2D1A8MPX8 630 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 RNF40O75150 1001 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 CYLC1P35663 651 aaPredicted RBP16.81■□□□□ 0.28
LINC00839-202ENST00000429940 AARSP49588 968 aaKnown RBP eCLIP16.81■□□□□ 0.28
LINC00839-202ENST00000429940 EN1Q05925 392 aaPredicted RBP16.81■□□□□ 0.28
LINC00839-202ENST00000429940 MEA1Q16626 185 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 TRAPPC3LQ5T215 181 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 ZNF662Q6ZS27 426 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 GOLGA6L1Q8N7Z2 621 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 GPKOWQ92917 476 aaPredicted RBP eCLIP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms